FFCP PHASE1:Hg19::chr17:38261177..38261211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38261177..38261211,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_at_chr17:38261177..38261211,- | |description=CAGE_peak_at_chr17:38261177..38261211,- | ||
|id=chr17:38261177..38261211,- | |id=chr17:38261177..38261211,- | ||
|ontology_enrichment_celltype=CL:0002322!2.35e-28!5;CL:0002623!1.60e-27!3;CL:0000622!9.03e-17!5;CL:0000154!4.51e-14!6;CL:0000946!3.40e-10!1;CL:0000786!3.40e-10!1;CL:0000980!3.40e-10!1;CL:0000150!1.49e-09!9;CL:0000148!1.48e-08!10;CL:0000541!1.48e-08!10 | |ontology_enrichment_celltype=CL:0002322!2.35e-28!5;CL:0002623!1.60e-27!3;CL:0000622!9.03e-17!5;CL:0000154!4.51e-14!6;CL:0000946!3.40e-10!1;CL:0000786!3.40e-10!1;CL:0000980!3.40e-10!1;CL:0000150!1.49e-09!9;CL:0000148!1.48e-08!10;CL:0000541!1.48e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.32e-48;5!CL:0002623;1.21e-46;3!CL:0000622;2.53e-28;5!CL:0000154;9.87e-24;6!CL:0000946;1.79e-16;1!CL:0000786;1.79e-16;1!CL:0002321;1.97e-16;15!CL:0000150;4.66e-16;9!CL:0000148;2.33e-14;10!CL:0000147;1.97e-10;14!CL:0000082;6.94e-08;19!CL:0002251;1.52e-07;20!CL:0000710;1.81e-07;20!CL:0000151;3.68e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.32e-48,5;CL:0002623,1.21e-46,3;CL:0000622,2.53e-28,5;CL:0000154,9.87e-24,6;CL:0000946,1.65e-16,1;CL:0000786,1.65e-16,1;CL:0000980,1.65e-16,1;CL:0000150,4.66e-16,9;CL:0000148,2.33e-14,10;CL:0000541,2.33e-14,10;CL:0000147,1.97e-10,14;CL:0000785,6.42e-09,2;CL:0000955,6.42e-09,2;CL:0000818,6.42e-09,2;CL:0000954,6.42e-09,2;CL:0000816,6.42e-09,2;CL:0000082,7.11e-08,19;CL:0002251,1.52e-07,20;CL:0000710,1.81e-07,20;CL:0000151,4.07e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000954;6.67e-09;2 | |||
|ontology_enrichment_disease=DOID:5409!7.91e-10!4;DOID:3905!1.67e-09!9 | |ontology_enrichment_disease=DOID:5409!7.91e-10!4;DOID:3905!1.67e-09!9 | ||
|ontology_enrichment_disease_v019=DOID:5409;3.07e-16;4!DOID:3905;5.43e-16;9!DOID:1324;7.67e-10;15!DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7!DOID:0050615;2.91e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.32e-16,4;DOID:3905,5.72e-16,9;DOID:1324,7.90e-10,15;DOID:1325,1.13e-09,7;DOID:3904,1.13e-09,7;DOID:0050615,3.00e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0001044!4.51e-14!6;UBERON:0003293!4.51e-14!6;UBERON:0003294!4.51e-14!6;UBERON:0010047!4.51e-14!6;UBERON:0000167!4.51e-14!6;UBERON:0000078!4.93e-12!18;UBERON:0000166!2.71e-10!21;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1;UBERON:0003408!1.20e-08!10;UBERON:0000165!1.12e-07!28;UBERON:0000930!1.12e-07!28;UBERON:0001004!8.55e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;9.87e-24;6!UBERON:0003293;9.87e-24;6!UBERON:0003294;9.87e-24;6!UBERON:0010047;9.87e-24;6!UBERON:0003408;9.87e-24;6!UBERON:0000167;9.87e-24;6!UBERON:0001041;1.52e-10;14!UBERON:0000161;6.47e-08;19!UBERON:0000166;6.47e-08;19!UBERON:0004802;6.94e-08;19!UBERON:0000115;6.94e-08;19!UBERON:0002048;7.03e-07;22!UBERON:0004807;7.03e-07;22!UBERON:0000117;7.03e-07;22!UBERON:0000171;7.03e-07;22!UBERON:0000170;7.03e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.87e-24,6;UBERON:0003293,9.87e-24,6;UBERON:0003294,9.87e-24,6;UBERON:0010047,9.87e-24,6;UBERON:0000167,9.87e-24,6;UBERON:0003408,1.61e-14,10;UBERON:0004802,7.11e-08,19;UBERON:0000115,7.11e-08,19;UBERON:0001004,3.05e-07,74;UBERON:0000166,6.62e-07,22;UBERON:0002048,7.18e-07,22;UBERON:0000117,7.18e-07,22;UBERON:0000171,7.18e-07,22;UBERON:0000170,7.18e-07,22;UBERON:0005597,7.18e-07,22;UBERON:0000118,7.18e-07,22 | |||
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|short_description=p@chr17:38261177..38261211,- | |short_description=p@chr17:38261177..38261211,- | ||
}} | }} |
Latest revision as of 16:19, 25 July 2015
Short description: | p@chr17:38261177..38261211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38261177..38261211, - |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.32e-48 | 5 |
acinar cell of salivary gland | 1.21e-46 | 3 |
acinar cell | 2.53e-28 | 5 |
protein secreting cell | 9.87e-24 | 6 |
antibody secreting cell | 1.65e-16 | 1 |
plasma cell | 1.65e-16 | 1 |
plasmablast | 1.65e-16 | 1 |
glandular epithelial cell | 4.66e-16 | 9 |
melanocyte | 2.33e-14 | 10 |
melanoblast | 2.33e-14 | 10 |
pigment cell | 1.97e-10 | 14 |
mature B cell | 6.42e-09 | 2 |
pre-B-II cell | 6.42e-09 | 2 |
transitional stage B cell | 6.42e-09 | 2 |
small pre-B-II cell | 6.42e-09 | 2 |
immature B cell | 6.42e-09 | 2 |
epithelial cell of lung | 7.11e-08 | 19 |
epithelial cell of alimentary canal | 1.52e-07 | 20 |
neurecto-epithelial cell | 1.81e-07 | 20 |
secretory cell | 4.07e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 9.87e-24 | 6 |
gland of oral region | 9.87e-24 | 6 |
gland of foregut | 9.87e-24 | 6 |
oral gland | 9.87e-24 | 6 |
oral cavity | 9.87e-24 | 6 |
gland of gut | 1.61e-14 | 10 |
respiratory tract epithelium | 7.11e-08 | 19 |
lung epithelium | 7.11e-08 | 19 |
respiratory system | 3.05e-07 | 74 |
oral opening | 6.62e-07 | 22 |
lung | 7.18e-07 | 22 |
respiratory tube | 7.18e-07 | 22 |
respiration organ | 7.18e-07 | 22 |
pair of lungs | 7.18e-07 | 22 |
lung primordium | 7.18e-07 | 22 |
lung bud | 7.18e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.32e-16 | 4 |
lung carcinoma | 5.72e-16 | 9 |
lung cancer | 7.90e-10 | 15 |
bronchus cancer | 1.13e-09 | 7 |
bronchogenic carcinoma | 1.13e-09 | 7 |
respiratory system cancer | 3.00e-09 | 16 |