FFCP PHASE1:Hg19::chr17:38179836..38179841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9862 | |EntrezGene=9862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22963 | |HGNC=22963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENST00000492176_5end | |association_with_transcript=-76bp_to_ENST00000492176_5end | ||
|cluster_id=chr17:38179836..38179841,- | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_3_at_MED24_5end | |description=CAGE_peak_3_at_MED24_5end | ||
|id=chr17:38179836..38179841,- | |id=chr17:38179836..38179841,- | ||
|ontology_enrichment_celltype=CL:0002139!1.09e-22!24;CL:0000115!1.37e-22!35;CL:0000071!4.50e-16!18;CL:0002546!4.50e-16!18;CL:0002078!9.80e-16!44;CL:0000213!6.84e-10!57;CL:0000215!6.84e-10!57;CL:0005020!2.73e-08!6;CL:0002138!2.73e-08!6;CL:0005022!2.73e-08!6;CL:0002543!9.55e-08!6;CL:1000413!1.85e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.09e-22!24;CL:0000115!1.37e-22!35;CL:0000071!4.50e-16!18;CL:0002546!4.50e-16!18;CL:0002078!9.80e-16!44;CL:0000213!6.84e-10!57;CL:0000215!6.84e-10!57;CL:0005020!2.73e-08!6;CL:0002138!2.73e-08!6;CL:0005022!2.73e-08!6;CL:0002543!9.55e-08!6;CL:1000413!1.85e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-39;24!CL:0000115;5.93e-33;36!CL:0000071;4.62e-24;18!CL:0002078;2.79e-22;45!CL:0002138;3.74e-18;6!CL:0002543;6.92e-17;6!CL:0000213;1.01e-13;58!CL:0000215;1.01e-13;58!CL:0002328;1.68e-09;3!CL:0002618;1.29e-08;3!CL:0002202;7.81e-08;9!CL:0002632;7.81e-08;9!CL:1000413;8.36e-08;9!CL:0002367;1.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.11e-40,36;CL:0002139,3.32e-39,24;CL:0002078,3.40e-31,45;CL:0000071,6.49e-24,18;CL:0002546,6.49e-24,18;CL:0000213,1.02e-22,58;CL:0000215,1.02e-22,58;CL:0005020,4.18e-18,6;CL:0002138,4.18e-18,6;CL:0005022,4.18e-18,6;CL:0002543,8.99e-17,6;CL:0002328,1.17e-09,3;CL:0000222,2.01e-09,121;CL:0000076,9.82e-09,63;CL:0002618,1.77e-08,3;CL:0002321,3.45e-08,250;CL:0002202,6.24e-08,9;CL:0002632,6.24e-08,9;CL:1000413,9.38e-08,9;CL:0002367,1.87e-07,2;CL:0000066,5.93e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;4.62e-24;18!CL:0005022;3.74e-18;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.50e-16!18;UBERON:0004638!4.50e-16!18;UBERON:0004852!4.50e-16!18;UBERON:0000119!1.02e-14!312;UBERON:0000483!5.00e-14!309;UBERON:0004111!1.02e-13!241;UBERON:0000477!1.70e-13!286;UBERON:0000487!2.03e-13!22;UBERON:0007023!2.79e-13!115;UBERON:0006914!4.50e-11!25;UBERON:0000025!1.01e-09!194;UBERON:0000481!3.79e-09!347;UBERON:0000467!3.95e-09!625;UBERON:0000480!4.82e-09!626;UBERON:0000468!6.27e-09!659;UBERON:0000055!1.09e-08!69;UBERON:0002049!1.57e-08!79;UBERON:0007798!1.57e-08!79;UBERON:0000475!3.27e-08!365;UBERON:0001473!7.33e-08!8;UBERON:0004536!7.33e-08!8;UBERON:0006558!7.33e-08!8;UBERON:0003915!1.85e-07!9;UBERON:0004700!1.85e-07!9;UBERON:0001917!1.85e-07!9;UBERON:0002465!2.66e-07!10;UBERON:0000923!2.77e-07!604;UBERON:0005291!2.77e-07!604;UBERON:0006598!2.77e-07!604;UBERON:0002532!2.77e-07!604;UBERON:0002050!3.32e-07!605;UBERON:0005423!3.32e-07!605;UBERON:0003075!6.53e-07!86;UBERON:0007284!6.53e-07!86;UBERON:0007196!6.95e-07!14;UBERON:0001558!6.95e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.62e-24;18!UBERON:0001986;4.62e-24;18!UBERON:0004852;4.62e-24;18!UBERON:0000490;3.29e-19;33!UBERON:0000487;4.11e-19;22!UBERON:0001473;9.62e-18;8!UBERON:0004536;9.62e-18;8!UBERON:0006558;9.62e-18;8!UBERON:0006914;1.91e-16;25!UBERON:0002465;5.74e-14;10!UBERON:0001638;5.06e-11;9!UBERON:0003920;5.06e-11;9!UBERON:0004582;5.06e-11;9!UBERON:0004815;1.68e-09;3!UBERON:0002031;1.68e-09;3!UBERON:0002185;1.89e-09;5!UBERON:0000055;9.97e-09;65!UBERON:0007196;1.54e-08;15!UBERON:0001558;1.54e-08;15!UBERON:0002049;5.74e-08;75!UBERON:0007798;5.74e-08;75!UBERON:0003915;8.36e-08;9!UBERON:0004700;8.36e-08;9!UBERON:0001917;8.36e-08;9!UBERON:0002133;1.84e-07;2!UBERON:0005969;1.86e-07;2!UBERON:0003956;1.86e-07;2!UBERON:0002405;2.62e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.49e-24,18;UBERON:0001986,6.49e-24,18;UBERON:0004852,6.49e-24,18;UBERON:0000487,5.39e-19,22;UBERON:0001473,8.31e-18,8;UBERON:0004536,8.31e-18,8;UBERON:0006558,8.31e-18,8;UBERON:0002049,6.83e-17,78;UBERON:0007798,6.83e-17,78;UBERON:0000055,1.29e-16,68;UBERON:0006914,2.42e-16,25;UBERON:0002465,5.12e-14,10;UBERON:0001638,5.99e-11,9;UBERON:0003920,5.99e-11,9;UBERON:0004582,5.99e-11,9;UBERON:0004535,2.84e-10,109;UBERON:0001009,7.79e-10,112;UBERON:0004815,1.17e-09,3;UBERON:0002031,1.17e-09,3;UBERON:0002185,1.35e-09,5;UBERON:0007196,1.25e-08,15;UBERON:0001558,1.25e-08,15;UBERON:0007500,1.39e-08,59;UBERON:0001981,1.39e-08,59;UBERON:0004537,1.39e-08,59;UBERON:0006965,1.39e-08,59;UBERON:0004111,1.82e-08,240;UBERON:0003915,9.38e-08,9;UBERON:0004700,9.38e-08,9;UBERON:0001917,9.38e-08,9;UBERON:0005969,1.87e-07,2;UBERON:0003956,1.87e-07,2;UBERON:0002133,1.99e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.738726348460727,1.42800483870977,0,0,0,0,0,0,0,0,0,0,1.83884244895785,4.51808878167375,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,1.09288586487763,0.370784442784429,0,0.174129737299267,0,0,0,0,0.39752481473341,2.58070378531837,1.38856200643038,0.56530794192401,2.09749718104953,2.47606237746061,0.626984899610432,2.32575083252396,2.13459757612026,1.67360306382335,0.402829317109147,1.52054421143703,3.41686880567437,2.20597848207521,0,1.7859945656816,1.12264686313085,1.0135033243499,4.5994991239765,4.74632829784064,3.66403487860815,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.587172493218824,0.809364721840658,1.82586048712923,2.85815839756851,6.1417158655884,0,0,0,1.82032272387605,0,2.52504170931099,1.7516592782075,0.831192346452549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,4.49607013030478,0,0.185176890317059,0,7.27954349695705,2.88662684050547,0,0,40.8557047163839,60.651102147536,55.3639583002681,0.790204397959275,0,0,0,0,0,0,0.425325291727159,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0.414656231081544,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.897048674762886,0,0.66004457238855,0,0,0,0,0,0,4.25547396069835,1.0656887160644,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.581051892299796,0,0.601519410909855,0,0,0,0,0,0,0,0,0.105551628892876,2.27466768141793,2.38131187387122,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,1.30012049207304,0,0.096670718292122,0.308097234229289,0.767518373630648,1.10269257987624,0.214840489736547,0,0.93749290157711,0,0,0.576570202095319,0.510450849978337,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,1.535386747868,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,6.07157078025144,6.29882496440969,1.73199802905922,0.670302275535787,2.17781969722645,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0.111308705022906,0,0,1.19548792950642,1.93398740871803,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0.260427761085233,0.0874599999961957,0.724999575434793,1.0241410345695,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.331737779793674,0.295547618953547,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0.485560759068186,0,0,0,0.252746318513952,0,0,10.634461963315,2.64793564700399,3.45326210247948,9.55779438183671,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0,0,4.46851842035607,0,36.6115242534175,0,0.429226048136571,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.544813624446302,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0.258565912723101,0.52893040697076,0,0,20.9303328632682,32.3840868505312,1.24271716604159,0,0,0,0,2.1760712134779,2.506898940227,2.14441903734423,0.983617892129413,0.157054096250234,0,0,0.1251909307065,0,0.776503360757966,1.4903136705932,0,1.12482367165896,0,0,4.9405822136616,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,6.21323933454091,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.543757863814654,0.0657727735628491,0,4.89418168325104,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,1.03608082081518,0,0,0.860454717640555,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.231522474323834,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.227336094654718,0,0,0.413731983447581,0.639701945702943,0,0,0.869046000142011,0,0.509177266225319,0.808468755832877,0.217716747896961,0,0.26940821205835,5.80949863680678,0,0.407016343054873,0,0,0,0,0.36672433254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| ||
|short_description=p3@MED24 | |short_description=p3@MED24 | ||
}} | }} |
Latest revision as of 23:43, 19 September 2015
Short description: | p3@MED24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MED24_5end |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | -76bp_to_ENST00000492176_5end |
EntrezGene: | MED24 |
HGNC: | 22963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.11e-40 | 36 |
endothelial cell of vascular tree | 3.32e-39 | 24 |
meso-epithelial cell | 3.40e-31 | 45 |
blood vessel endothelial cell | 6.49e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.49e-24 | 18 |
lining cell | 1.02e-22 | 58 |
barrier cell | 1.02e-22 | 58 |
lymphangioblast | 4.18e-18 | 6 |
endothelial cell of lymphatic vessel | 4.18e-18 | 6 |
vascular lymphangioblast | 4.18e-18 | 6 |
vein endothelial cell | 8.99e-17 | 6 |
bronchial epithelial cell | 1.17e-09 | 3 |
mesodermal cell | 2.01e-09 | 121 |
squamous epithelial cell | 9.82e-09 | 63 |
endothelial cell of umbilical vein | 1.77e-08 | 3 |
embryonic cell | 3.45e-08 | 250 |
epithelial cell of tracheobronchial tree | 6.24e-08 | 9 |
epithelial cell of lower respiratory tract | 6.24e-08 | 9 |
endothelial cell of artery | 9.38e-08 | 9 |
trabecular meshwork cell | 1.87e-07 | 2 |
epithelial cell | 5.93e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.49e-24 | 18 |
endothelium | 6.49e-24 | 18 |
cardiovascular system endothelium | 6.49e-24 | 18 |
simple squamous epithelium | 5.39e-19 | 22 |
lymphatic vessel | 8.31e-18 | 8 |
lymph vasculature | 8.31e-18 | 8 |
lymphatic part of lymphoid system | 8.31e-18 | 8 |
vasculature | 6.83e-17 | 78 |
vascular system | 6.83e-17 | 78 |
vessel | 1.29e-16 | 68 |
squamous epithelium | 2.42e-16 | 25 |
lymphoid system | 5.12e-14 | 10 |
vein | 5.99e-11 | 9 |
venous blood vessel | 5.99e-11 | 9 |
venous system | 5.99e-11 | 9 |
cardiovascular system | 2.84e-10 | 109 |
circulatory system | 7.79e-10 | 112 |
lower respiratory tract epithelium | 1.17e-09 | 3 |
epithelium of bronchus | 1.17e-09 | 3 |
bronchus | 1.35e-09 | 5 |
tracheobronchial tree | 1.25e-08 | 15 |
lower respiratory tract | 1.25e-08 | 15 |
epithelial tube open at both ends | 1.39e-08 | 59 |
blood vessel | 1.39e-08 | 59 |
blood vasculature | 1.39e-08 | 59 |
vascular cord | 1.39e-08 | 59 |
anatomical conduit | 1.82e-08 | 240 |
endothelial tube | 9.38e-08 | 9 |
arterial system endothelium | 9.38e-08 | 9 |
endothelium of artery | 9.38e-08 | 9 |
reticulum trabeculare | 1.87e-07 | 2 |
aqueous drainage system | 1.87e-07 | 2 |
atrioventricular valve | 1.99e-07 | 2 |