FFCP PHASE1:Hg19::chr17:37809300..37809309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10948 | |EntrezGene=10948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17579 | |HGNC=17579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000488876,uc002hsf.2_5end | |association_with_transcript=-41bp_to_ENST00000488876,uc002hsf.2_5end | ||
|cluster_id=chr17:37809300..37809309,+ | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_13_at_STARD3_5end | |description=CAGE_peak_13_at_STARD3_5end | ||
|id=chr17:37809300..37809309,+ | |id=chr17:37809300..37809309,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.22e-44;6!CL:0002255;1.22e-44;6!CL:0000499;1.47e-10;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.22e-44,6;CL:0002255,1.22e-44,6;CL:0000499,1.47e-10,28;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.04e-34;2!UBERON:0005795;2.38e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;1.22e-44;6!DOID:299;1.09e-11;25!DOID:120;6.56e-11;27!DOID:193;3.10e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.22e-44,6;DOID:299,1.09e-11,25;DOID:120,6.56e-11,27;DOID:193,3.10e-10,29 | |||
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| ||
|short_description=p13@STARD3 | |short_description=p13@STARD3 | ||
}} | }} |
Latest revision as of 22:03, 19 September 2015
Short description: | p13@STARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_STARD3_5end |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | -41bp_to_ENST00000488876, uc002hsf.2_5end |
EntrezGene: | STARD3 |
HGNC: | 17579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.22e-44 | 6 |
stromal cell of endometrium | 1.22e-44 | 6 |
stromal cell | 1.47e-10 | 28 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 5.04e-34 | 2 |
future caudate nucleus | 5.04e-34 | 2 |
caudate-putamen | 3.27e-23 | 3 |
dorsal striatum | 3.27e-23 | 3 |
corpus striatum | 8.69e-18 | 4 |
striatum | 8.69e-18 | 4 |
ventral part of telencephalon | 8.69e-18 | 4 |
future corpus striatum | 8.69e-18 | 4 |
uterus | 1.09e-13 | 21 |
embryonic uterus | 4.01e-13 | 22 |
internal female genitalia | 4.01e-13 | 22 |
internal genitalia | 1.09e-11 | 25 |
telencephalic nucleus | 8.99e-11 | 7 |
basal ganglion | 1.12e-08 | 9 |
neural nucleus | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.22e-44 | 6 |
adenocarcinoma | 1.09e-11 | 25 |
female reproductive organ cancer | 6.56e-11 | 27 |
reproductive organ cancer | 3.10e-10 | 29 |