FFCP PHASE1:Hg19::chr20:656437..656451,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140809 | |EntrezGene=140809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16132 | |HGNC=16132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488788_5end | |association_with_transcript=0bp_to_ENST00000488788_5end | ||
|cluster_id=chr20:656437..656451,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_4_at_SRXN1_5end | |description=CAGE_peak_4_at_SRXN1_5end | ||
|id=chr20:656437..656451,- | |id=chr20:656437..656451,- | ||
|ontology_enrichment_celltype=CL:0002319!3.57e-11!25;CL:0000047!1.70e-08!8;CL:0000133!7.78e-08!59;CL:0002322!1.19e-07!5 | |ontology_enrichment_celltype=CL:0002319!3.57e-11!25;CL:0000047!1.70e-08!8;CL:0000133!7.78e-08!59;CL:0002322!1.19e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.42e-10;2!CL:0000242;1.42e-10;2!CL:0000540;3.40e-08;6!CL:0000404;3.40e-08;6!CL:0002319;4.47e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.35e-10,2;CL:0000047,2.17e-10,8;CL:0000540,3.53e-08,6;CL:0000031,3.53e-08,6;CL:0000404,3.53e-08,6;CL:0002319,4.43e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.19e-14;3!UBERON:0006601;2.02e-10;82!CL:0000031;3.40e-08;6!UBERON:0003056;2.18e-07;3!UBERON:0006238;5.60e-07;10 | |||
|ontology_enrichment_disease=DOID:169!6.37e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.95e-67!82;UBERON:0000073!5.38e-67!94;UBERON:0001016!5.38e-67!94;UBERON:0005743!2.31e-66!86;UBERON:0001049!8.23e-57!57;UBERON:0005068!8.23e-57!57;UBERON:0006241!8.23e-57!57;UBERON:0007135!8.23e-57!57;UBERON:0000955!5.71e-53!69;UBERON:0006238!5.71e-53!69;UBERON:0002616!1.11e-48!59;UBERON:0003075!3.99e-47!86;UBERON:0007284!3.99e-47!86;UBERON:0002346!1.71e-44!90;UBERON:0001950!4.61e-41!20;UBERON:0004121!2.25e-37!169;UBERON:0002619!5.34e-37!22;UBERON:0001893!1.53e-36!34;UBERON:0002020!2.61e-36!34;UBERON:0003528!2.61e-36!34;UBERON:0000924!3.57e-36!173;UBERON:0006601!3.57e-36!173;UBERON:0001869!6.31e-36!32;UBERON:0000956!1.86e-35!25;UBERON:0000203!1.86e-35!25;UBERON:0002780!7.63e-35!41;UBERON:0001890!7.63e-35!41;UBERON:0006240!7.63e-35!41;UBERON:0002791!2.26e-34!33;UBERON:0003080!7.46e-34!42;UBERON:0000033!6.04e-28!123;UBERON:0003056!3.53e-27!61;UBERON:0000153!4.16e-26!129;UBERON:0007811!4.16e-26!129;UBERON:0003076!5.21e-25!15;UBERON:0003057!5.21e-25!15;UBERON:0004733!5.88e-23!12;UBERON:0002028!5.88e-23!12;UBERON:0007277!5.88e-23!12;UBERON:0007023!7.55e-23!115;UBERON:0004732!5.44e-21!13;UBERON:0002680!1.89e-16!9;UBERON:0001895!1.89e-16!9;UBERON:0010092!1.89e-16!9;UBERON:0000200!2.62e-15!6;UBERON:0002021!6.13e-14!5;UBERON:0001872!1.24e-13!5;UBERON:0001871!4.52e-11!7;UBERON:0000025!5.37e-11!194;UBERON:0002298!1.13e-10!8;UBERON:0002037!2.38e-10!6;UBERON:0006215!2.38e-10!6;UBERON:0000064!6.92e-10!219;UBERON:0001896!2.84e-08!3;UBERON:0005290!2.84e-08!3;UBERON:0010096!2.84e-08!3;UBERON:0002771!3.65e-08!3;UBERON:0000988!6.91e-08!3;UBERON:0000483!1.29e-07!309;UBERON:0000119!1.96e-07!312;UBERON:0004111!5.63e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.35e-53;20!UBERON:0002619;1.28e-48;22!UBERON:0000956;1.38e-42;25!UBERON:0000203;1.38e-42;25!UBERON:0001869;4.65e-32;32!UBERON:0001893;1.96e-29;34!UBERON:0002791;1.37e-28;32!UBERON:0003528;1.40e-28;34!UBERON:0002020;1.40e-28;34!UBERON:0002021;4.10e-24;5!UBERON:0000073;6.07e-24;53!UBERON:0002616;6.07e-24;53!UBERON:0002780;1.01e-22;41!UBERON:0001890;1.01e-22;41!UBERON:0000955;1.41e-22;68!UBERON:0000200;6.14e-19;6!UBERON:0001016;3.80e-18;83!UBERON:0001017;1.30e-17;75!UBERON:0001872;7.05e-16;5!UBERON:0001870;7.60e-14;3!UBERON:0004733;2.65e-13;12!UBERON:0002028;2.65e-13;12!UBERON:0004732;3.09e-12;13!UBERON:0002702;8.43e-10;2!UBERON:0002680;1.84e-08;9!UBERON:0001895;1.84e-08;9!UBERON:0002037;1.48e-07;6!UBERON:0002298;2.27e-07;6!UBERON:0001896;5.99e-07;3!UBERON:0005290;5.99e-07;3!UBERON:0011216;6.70e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.11e-53,20;UBERON:0001016,5.62e-52,89;UBERON:0001017,3.36e-51,81;UBERON:0002619,1.93e-48,22;UBERON:0000955,7.97e-46,68;UBERON:0006238,7.97e-46,68;UBERON:0000073,5.20e-44,53;UBERON:0002616,5.20e-44,53;UBERON:0000956,1.98e-42,25;UBERON:0000203,1.98e-42,25;UBERON:0001049,2.11e-41,56;UBERON:0005068,2.11e-41,56;UBERON:0006241,2.11e-41,56;UBERON:0007135,2.11e-41,56;UBERON:0001869,3.95e-37,32;UBERON:0001893,8.78e-35,34;UBERON:0003528,1.23e-34,34;UBERON:0002020,1.23e-34,34;UBERON:0002791,1.19e-32,32;UBERON:0003075,5.18e-32,82;UBERON:0007284,5.18e-32,82;UBERON:0002780,6.96e-32,41;UBERON:0001890,6.96e-32,41;UBERON:0003080,6.96e-32,41;UBERON:0006240,6.96e-32,41;UBERON:0002346,2.89e-30,86;UBERON:0004121,1.25e-29,171;UBERON:0000924,1.25e-29,171;UBERON:0006601,1.25e-29,171;UBERON:0010371,1.49e-28,104;UBERON:0003056,1.39e-25,61;UBERON:0002021,3.91e-24,5;UBERON:0011216,1.81e-19,223;UBERON:0000200,6.51e-19,6;UBERON:0010314,9.57e-18,132;UBERON:0007023,4.42e-16,114;UBERON:0001872,7.76e-16,5;UBERON:0001870,9.33e-14,3;UBERON:0004733,3.03e-13,12;UBERON:0002028,3.03e-13,12;UBERON:0007277,3.03e-13,12;UBERON:0004732,3.50e-12,13;UBERON:0003076,1.76e-10,15;UBERON:0003057,1.76e-10,15;UBERON:0002702,8.83e-10,2;UBERON:0000025,2.35e-09,192;UBERON:0002680,2.27e-08,9;UBERON:0001895,2.27e-08,9;UBERON:0010092,2.27e-08,9;UBERON:0002037,1.72e-07,6;UBERON:0006215,1.72e-07,6;UBERON:0002298,2.25e-07,6;UBERON:0001896,5.22e-07,3;UBERON:0005290,5.22e-07,3;UBERON:0010096,5.22e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,2.90250954043037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,11.712586847186,9.27946575333234,15.4114964107601,7.01732626818479,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,2.90799823828566,1.11321717794222,5.98841394003583,0,0,0,0,0,0,5.51589397186343,0.291604613383254,0.520874984799877,0,0,3.05163472634166,2.54332297841817,2.65992857058193,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.539209063845416,0,1.87411556580271,0,0,0,0,0,7.03967351750127,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74559555639118,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,1.001527445652,0.573409195690071,1.22021956690538,2.98062734118641,0.691743174681154,0,0,0,0,2.81000943484129,5.65192011582218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81367616868034,0.539124056983409,0,2.73024095480035,0,0,0,0,0,0,0,0,0,0.770750701157514,4.25089728976755,3.19267718114303,1.23069818544453,7.81422258287326,10.9960031418106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71456715401171,0.781078098613847,3.10030194751776,3.10737469950143,8.75159694429151,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,4.27523028158519,0,0,0,0,0,0,0,0,4.43154573895269,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.59160620129095,0,0,2.6385724018903,0.754814217833368,0,0,0,0,0.707029641304878,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,2.90250954043037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,11.712586847186,9.27946575333234,15.4114964107601,7.01732626818479,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,2.90799823828566,1.11321717794222,5.98841394003583,0,0,0,0,0,0,5.51589397186343,0.291604613383254,0.520874984799877,0,0,3.05163472634166,2.54332297841817,2.65992857058193,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.539209063845416,0,1.87411556580271,0,0,0,0,0,7.03967351750127,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74559555639118,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,1.001527445652,0.573409195690071,1.22021956690538,2.98062734118641,0.691743174681154,0,0,0,0,2.81000943484129,5.65192011582218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81367616868034,0.539124056983409,0,2.73024095480035,0,0,0,0,0,0,0,0,0,0.770750701157514,4.25089728976755,3.19267718114303,1.23069818544453,7.81422258287326,10.9960031418106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71456715401171,0.781078098613847,3.10030194751776,3.10737469950143,8.75159694429151,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,4.27523028158519,0,0,0,0,0,0,0,0,4.43154573895269,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,1.59160620129095,0,0,2.6385724018903,0.754814217833368,0,0,0,0,0.707029641304878,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0,0,2.03974470572744,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p4@SRXN1 | |short_description=p4@SRXN1 | ||
}} | }} |
Latest revision as of 15:51, 17 September 2015
Short description: | p4@SRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRXN1_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000488788_5end |
EntrezGene: | SRXN1 |
HGNC: | 16132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.35e-10 | 2 |
neuronal stem cell | 2.17e-10 | 8 |
neuron | 3.53e-08 | 6 |
neuroblast | 3.53e-08 | 6 |
electrically signaling cell | 3.53e-08 | 6 |
neural cell | 4.43e-08 | 25 |