FFCP PHASE1:Hg19::chr17:2140078..2140091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23293 | |EntrezGene=23293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17809 | |HGNC=17809 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z874 | |UniProt=B7Z874 | ||
|association_with_transcript=49bp_to_ENST00000536871,uc010vqv.1_5end | |association_with_transcript=49bp_to_ENST00000536871,uc010vqv.1_5end | ||
|cluster_id=chr17:2140078..2140091,- | |||
|description=CAGE_peak_18_at_SMG6_5end | |description=CAGE_peak_18_at_SMG6_5end | ||
|id=chr17:2140078..2140091,- | |id=chr17:2140078..2140091,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;4.66e-21;1!CL:0000746;4.84e-08;3!CL:0000135;6.56e-08;3!CL:0002615;6.56e-08;3!CL:0000388;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.72e-21,1;CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0000135,6.78e-08,3;CL:0000388,6.78e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.66e-21;1!CL:0000513;4.84e-08;3!UBERON:0009847;6.56e-08;3!UBERON:0003353;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-22!115;UBERON:0003978!1.92e-10!3;UBERON:0009751!1.92e-10!3;UBERON:0000946!1.92e-10!3;UBERON:0002523!1.92e-10!3;UBERON:0005983!1.92e-10!3;UBERON:0002165!1.92e-10!3;UBERON:0002062!1.92e-10!3;UBERON:0007280!1.92e-10!3;UBERON:0002133!1.02e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!4.80e-22!115;UBERON:0003978!1.92e-10!3;UBERON:0009751!1.92e-10!3;UBERON:0000946!1.92e-10!3;UBERON:0002523!1.92e-10!3;UBERON:0005983!1.92e-10!3;UBERON:0002165!1.92e-10!3;UBERON:0002062!1.92e-10!3;UBERON:0007280!1.92e-10!3;UBERON:0002133!1.02e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.66e-21;1!UBERON:0000078;3.18e-11;2!UBERON:0002012;3.18e-11;2!UBERON:0008886;3.18e-11;2!UBERON:0001043;6.56e-08;3!UBERON:0007846;6.56e-08;3!UBERON:0000043;6.56e-08;3!UBERON:0007845;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.45e-21,1;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0007846,6.78e-08,3;UBERON:0000043,6.78e-08,3;UBERON:0007845,6.78e-08,3;UBERON:0001043,7.26e-08,3;UBERON:0009143,7.26e-08,3;UBERON:0004145,7.76e-08,3 | |||
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| ||
|short_description=p18@SMG6 | |short_description=p18@SMG6 | ||
}} | }} |
Latest revision as of 02:16, 19 September 2015
Short description: | p18@SMG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SMG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000536871, uc010vqv.1_5end |
EntrezGene: | SMG6 |
HGNC: | 17809 |
UniProt: | B7Z874 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
fibrocyte | 6.78e-08 | 3 |
tendon cell | 6.78e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.45e-21 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
dense regular connective tissue | 6.78e-08 | 3 |
tendon | 6.78e-08 | 3 |
regular connective tissue | 6.78e-08 | 3 |
esophagus | 7.26e-08 | 3 |
esophageal region | 7.26e-08 | 3 |
outflow tract | 7.76e-08 | 3 |