FFCP PHASE1:Hg19::chr20:5903888..5903912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903888..5903912,- | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903888..5903912,- | |description=CAGE_peak_at_chr20:5903888..5903912,- | ||
|id=chr20:5903888..5903912,- | |id=chr20:5903888..5903912,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.97e-14;1!CL:0000164;1.97e-14;1!CL:0000502;1.97e-14;1!CL:0000172;1.97e-14;1!CL:0000173;1.97e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.41e-14,1;CL:0000164,2.41e-14,1;CL:0000502,2.41e-14,1;CL:0000172,2.41e-14,1;CL:0000173,2.41e-14,1;CL:0002351,2.41e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.54e-19;3!CL:0002351;1.97e-14;1!UBERON:0010227;1.97e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.97e-14;1!DOID:169;1.10e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.41e-14,1;DOID:169,1.10e-09,6 | |||
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| ||
|short_description=p@chr20:5903888..5903912,- | |short_description=p@chr20:5903888..5903912,- | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903888..5903912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903888..5903912, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.41e-14 | 1 |
enteroendocrine cell | 2.41e-14 | 1 |
type D enteroendocrine cell | 2.41e-14 | 1 |
somatostatin secreting cell | 2.41e-14 | 1 |
pancreatic D cell | 2.41e-14 | 1 |
progenitor cell of endocrine pancreas | 2.41e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.41e-14 | 1 |
neuroendocrine tumor | 1.10e-09 | 6 |