FFCP PHASE1:Hg19::chr17:17740330..17740349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6720 | |EntrezGene=6720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11289 | |HGNC=11289 | ||
|TSSclassifier=strong | |||
|UniProt=P36956,B0I4X3 | |UniProt=P36956,B0I4X3 | ||
|association_with_transcript=-5bp_to_ENST00000338854,NM_001005291,NM_004176,uc002grt.1,uc002gru.1,uc010cpq.1_5end | |association_with_transcript=-5bp_to_ENST00000338854,NM_001005291,NM_004176,uc002grt.1,uc002gru.1,uc010cpq.1_5end | ||
|cluster_id=chr17:17740330..17740349,- | |||
|description=CAGE_peak_3_at_SREBF1_5end | |description=CAGE_peak_3_at_SREBF1_5end | ||
|id=chr17:17740330..17740349,- | |id=chr17:17740330..17740349,- | ||
|ontology_enrichment_celltype=CL:0000066!6.64e-17!254;CL:0000220!6.37e-11!246;CL:0002321!7.93e-11!248 | |ontology_enrichment_celltype=CL:0000066!6.64e-17!254;CL:0000220!6.37e-11!246;CL:0002321!7.93e-11!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.53e-17,253;CL:0002321,7.51e-11,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.48e-10!143;DOID:14566!6.11e-08!239;DOID:162!1.59e-07!235 | |ontology_enrichment_disease=DOID:0050687!2.48e-10!143;DOID:14566!6.11e-08!239;DOID:162!1.59e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.46e-10,143;DOID:14566,6.06e-08,239;DOID:162,1.58e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!5.02e-11!238;UBERON:0009142!5.02e-11!238;UBERON:0005177!7.10e-10!107;UBERON:0004119!5.50e-09!169;UBERON:0000925!5.50e-09!169;UBERON:0006595!5.50e-09!169;UBERON:0002100!1.06e-08!216;UBERON:0000464!1.22e-08!104;UBERON:0000466!2.26e-08!126;UBERON:0001048!5.58e-08!168;UBERON:0000077!1.57e-07!130;UBERON:0005085!6.47e-07!29;UBERON:0001041!6.82e-07!98;UBERON:0009569!8.12e-07!113 | |ontology_enrichment_uberon=UBERON:0003104!5.02e-11!238;UBERON:0009142!5.02e-11!238;UBERON:0005177!7.10e-10!107;UBERON:0004119!5.50e-09!169;UBERON:0000925!5.50e-09!169;UBERON:0006595!5.50e-09!169;UBERON:0002100!1.06e-08!216;UBERON:0000464!1.22e-08!104;UBERON:0000466!2.26e-08!126;UBERON:0001048!5.58e-08!168;UBERON:0000077!1.57e-07!130;UBERON:0005085!6.47e-07!29;UBERON:0001041!6.82e-07!98;UBERON:0009569!8.12e-07!113 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.89e-10,101;UBERON:0002100,3.30e-10,199;UBERON:0004119,8.42e-07,160;UBERON:0000925,8.42e-07,160;UBERON:0006595,8.42e-07,160;UBERON:0009569,9.54e-07,112 | |||
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| ||
|short_description=p3@SREBF1 | |short_description=p3@SREBF1 | ||
}} | }} |
Latest revision as of 22:19, 18 September 2015
Short description: | p3@SREBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SREBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000338854, NM_001005291, NM_004176, uc002grt.1, uc002gru.1, uc010cpq.1_5end |
EntrezGene: | SREBF1 |
HGNC: | 11289 |
UniProt: | P36956B0I4X3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.53e-17 | 253 |
embryonic cell | 7.51e-11 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.89e-10 | 101 |
trunk | 3.30e-10 | 199 |
endoderm-derived structure | 8.42e-07 | 160 |
endoderm | 8.42e-07 | 160 |
presumptive endoderm | 8.42e-07 | 160 |
subdivision of trunk | 9.54e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.46e-10 | 143 |
disease of cellular proliferation | 6.06e-08 | 239 |
cancer | 1.58e-07 | 235 |