FFCP PHASE1:Hg19::chr20:49547766..49547785,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23394 | |EntrezGene=23394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15766 | |HGNC=15766 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2P0 | |UniProt=Q9H2P0 | ||
|association_with_transcript=-16bp_to_ENST00000396029_5end | |association_with_transcript=-16bp_to_ENST00000396029_5end | ||
|cluster_id=chr20:49547766..49547785,- | |||
|description=CAGE_peak_5_at_ADNP_5end | |description=CAGE_peak_5_at_ADNP_5end | ||
|id=chr20:49547766..49547785,- | |id=chr20:49547766..49547785,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.45e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.51e-10!143;DOID:162!1.04e-08!235;DOID:14566!2.10e-08!239;DOID:305!5.41e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.23e-09,143;DOID:162,4.32e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.45e-18!94;UBERON:0001016!2.45e-18!94;UBERON:0001017!5.50e-18!82;UBERON:0005743!4.14e-17!86;UBERON:0000924!1.34e-13!173;UBERON:0006601!1.34e-13!173;UBERON:0007023!1.57e-13!115;UBERON:0000955!4.98e-13!69;UBERON:0006238!4.98e-13!69;UBERON:0004121!7.83e-13!169;UBERON:0001049!2.05e-12!57;UBERON:0005068!2.05e-12!57;UBERON:0006241!2.05e-12!57;UBERON:0007135!2.05e-12!57;UBERON:0003080!2.10e-11!42;UBERON:0002780!6.33e-11!41;UBERON:0001890!6.33e-11!41;UBERON:0006240!6.33e-11!41;UBERON:0002616!2.63e-10!59;UBERON:0001893!3.76e-09!34;UBERON:0002020!5.15e-09!34;UBERON:0003528!5.15e-09!34;UBERON:0001869!5.81e-09!32;UBERON:0002346!6.21e-09!90;UBERON:0002791!9.41e-09!33;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0003075!3.26e-08!86;UBERON:0007284!3.26e-08!86;UBERON:0000033!3.58e-08!123;UBERON:0003056!1.47e-07!61;UBERON:0000956!3.57e-07!25;UBERON:0000203!3.57e-07!25;UBERON:0001950!9.27e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.50e-09;34!UBERON:0001869;4.21e-09;32!UBERON:0003528;5.35e-09;34!UBERON:0002020;5.35e-09;34!UBERON:0002780;9.34e-09;41!UBERON:0001890;9.34e-09;41!UBERON:0002791;1.10e-08;32!UBERON:0000073;4.33e-08;53!UBERON:0002616;4.33e-08;53!UBERON:0001950;6.43e-08;20!UBERON:0000956;8.75e-08;25!UBERON:0000203;8.75e-08;25!UBERON:0002619;1.69e-07;22!UBERON:0000955;3.04e-07;68!UBERON:0001016;4.73e-07;83!UBERON:0001017;7.23e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.35e-19,89;UBERON:0001017,1.14e-18,81;UBERON:0011216,4.25e-18,223;UBERON:0007023,7.31e-16,114;UBERON:0004121,4.19e-14,171;UBERON:0000924,4.19e-14,171;UBERON:0006601,4.19e-14,171;UBERON:0000955,1.62e-13,68;UBERON:0006238,1.62e-13,68;UBERON:0001049,3.91e-13,56;UBERON:0005068,3.91e-13,56;UBERON:0006241,3.91e-13,56;UBERON:0007135,3.91e-13,56;UBERON:0000073,3.35e-12,53;UBERON:0002616,3.35e-12,53;UBERON:0002780,4.69e-12,41;UBERON:0001890,4.69e-12,41;UBERON:0003080,4.69e-12,41;UBERON:0006240,4.69e-12,41;UBERON:0001893,2.06e-10,34;UBERON:0003528,2.95e-10,34;UBERON:0002020,2.95e-10,34;UBERON:0001869,3.30e-10,32;UBERON:0002346,6.05e-10,86;UBERON:0002791,1.76e-09,32;UBERON:0003075,3.93e-09,82;UBERON:0007284,3.93e-09,82;UBERON:0003056,2.18e-08,61;UBERON:0000956,3.28e-08,25;UBERON:0000203,3.28e-08,25;UBERON:0001950,4.90e-08,20;UBERON:0002619,1.15e-07,22;UBERON:0010371,2.03e-07,104 | |||
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| ||
|short_description=p5@ADNP | |short_description=p5@ADNP | ||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p5@ADNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADNP_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000396029_5end |
EntrezGene: | ADNP |
HGNC: | 15766 |
UniProt: | Q9H2P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.35e-19 | 89 |
central nervous system | 1.14e-18 | 81 |
organ system subdivision | 4.25e-18 | 223 |
adult organism | 7.31e-16 | 114 |
ectoderm-derived structure | 4.19e-14 | 171 |
ectoderm | 4.19e-14 | 171 |
presumptive ectoderm | 4.19e-14 | 171 |
brain | 1.62e-13 | 68 |
future brain | 1.62e-13 | 68 |
neural tube | 3.91e-13 | 56 |
neural rod | 3.91e-13 | 56 |
future spinal cord | 3.91e-13 | 56 |
neural keel | 3.91e-13 | 56 |
regional part of nervous system | 3.35e-12 | 53 |
regional part of brain | 3.35e-12 | 53 |
regional part of forebrain | 4.69e-12 | 41 |
forebrain | 4.69e-12 | 41 |
anterior neural tube | 4.69e-12 | 41 |
future forebrain | 4.69e-12 | 41 |
telencephalon | 2.06e-10 | 34 |
brain grey matter | 2.95e-10 | 34 |
gray matter | 2.95e-10 | 34 |
cerebral hemisphere | 3.30e-10 | 32 |
neurectoderm | 6.05e-10 | 86 |
regional part of telencephalon | 1.76e-09 | 32 |
neural plate | 3.93e-09 | 82 |
presumptive neural plate | 3.93e-09 | 82 |
pre-chordal neural plate | 2.18e-08 | 61 |
cerebral cortex | 3.28e-08 | 25 |
pallium | 3.28e-08 | 25 |
neocortex | 4.90e-08 | 20 |
regional part of cerebral cortex | 1.15e-07 | 22 |
ecto-epithelium | 2.03e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.23e-09 | 143 |
cancer | 4.32e-07 | 235 |