FFCP PHASE1:Hg19::chr17:13505219..13505299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9955 | |EntrezGene=9955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5196 | |HGNC=5196 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y663 | |UniProt=Q9Y663 | ||
|association_with_transcript=0bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | |association_with_transcript=0bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | ||
|cluster_id=chr17:13505219..13505299,- | |||
|description=CAGE_peak_1_at_HS3ST3A1_5end | |description=CAGE_peak_1_at_HS3ST3A1_5end | ||
|id=chr17:13505219..13505299,- | |id=chr17:13505219..13505299,- | ||
|ontology_enrichment_celltype=CL:0000055!8.41e-39!180;CL:0000057!1.29e-20!75;CL:0000680!4.02e-11!57;CL:0000056!4.02e-11!57;CL:0000355!4.02e-11!57;CL:0000393!4.07e-11!60;CL:0000211!4.07e-11!60;CL:0000183!4.49e-11!59;CL:0002620!1.77e-10!23;CL:0000187!3.02e-10!54;CL:0000192!4.75e-08!42;CL:0000514!4.75e-08!42;CL:0000222!1.90e-07!119;CL:0002334!4.73e-07!12;CL:0000133!9.76e-07!59 | |ontology_enrichment_celltype=CL:0000055!8.41e-39!180;CL:0000057!1.29e-20!75;CL:0000680!4.02e-11!57;CL:0000056!4.02e-11!57;CL:0000355!4.02e-11!57;CL:0000393!4.07e-11!60;CL:0000211!4.07e-11!60;CL:0000183!4.49e-11!59;CL:0002620!1.77e-10!23;CL:0000187!3.02e-10!54;CL:0000192!4.75e-08!42;CL:0000514!4.75e-08!42;CL:0000222!1.90e-07!119;CL:0002334!4.73e-07!12;CL:0000133!9.76e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-11;23!CL:0000057;1.45e-10;73!CL:0002334;1.44e-07;12!CL:0002320;3.09e-07;188!CL:0000723;3.52e-07;61!CL:0000393;6.84e-07;61!CL:0000211;6.84e-07;61!CL:0000187;8.90e-07;55!CL:1000449;9.13e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.93e-23,76;CL:0000393,6.22e-12,61;CL:0000211,6.22e-12,61;CL:0000680,6.22e-12,58;CL:0000056,6.22e-12,58;CL:0000355,6.22e-12,58;CL:0002620,1.37e-11,23;CL:0000187,5.57e-11,55;CL:0000222,1.70e-08,121;CL:0000192,1.71e-08,43;CL:0000514,1.71e-08,43;CL:0000048,7.79e-08,427;CL:0002334,1.47e-07,12;CL:0000034,2.73e-07,441;CL:0000723,3.62e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000355;4.84e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.79e-16!143;UBERON:0000475!3.13e-15!365;UBERON:0000914!1.09e-14!83;UBERON:0002329!1.09e-14!83;UBERON:0003077!1.09e-14!83;UBERON:0003059!1.09e-14!83;UBERON:0007282!1.09e-14!83;UBERON:0009618!1.09e-14!83;UBERON:0007285!1.09e-14!83;UBERON:0004290!6.39e-14!70;UBERON:0002100!3.19e-12!216;UBERON:0002199!2.45e-10!45;UBERON:0002416!2.45e-10!45;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0000486!7.83e-10!82;UBERON:0002385!8.52e-10!63;UBERON:0001015!8.52e-10!63;UBERON:0000383!8.52e-10!63;UBERON:0003102!2.05e-09!95;UBERON:0002097!1.40e-08!40;UBERON:0000481!2.21e-08!347;UBERON:0003104!7.46e-08!238;UBERON:0009142!7.46e-08!238;UBERON:0004876!9.72e-07!20 | |ontology_enrichment_uberon=UBERON:0005256!2.79e-16!143;UBERON:0000475!3.13e-15!365;UBERON:0000914!1.09e-14!83;UBERON:0002329!1.09e-14!83;UBERON:0003077!1.09e-14!83;UBERON:0003059!1.09e-14!83;UBERON:0007282!1.09e-14!83;UBERON:0009618!1.09e-14!83;UBERON:0007285!1.09e-14!83;UBERON:0004290!6.39e-14!70;UBERON:0002100!3.19e-12!216;UBERON:0002199!2.45e-10!45;UBERON:0002416!2.45e-10!45;UBERON:0001134!4.95e-10!61;UBERON:0002036!4.95e-10!61;UBERON:0003082!4.95e-10!61;UBERON:0000486!7.83e-10!82;UBERON:0002385!8.52e-10!63;UBERON:0001015!8.52e-10!63;UBERON:0000383!8.52e-10!63;UBERON:0003102!2.05e-09!95;UBERON:0002097!1.40e-08!40;UBERON:0000481!2.21e-08!347;UBERON:0003104!7.46e-08!238;UBERON:0009142!7.46e-08!238;UBERON:0004876!9.72e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.91e-07;41!UBERON:0003102;4.15e-07;50!UBERON:0002199;5.40e-07;46!UBERON:0002416;5.40e-07;46!UBERON:0006555;9.13e-07;15!UBERON:0004819;9.13e-07;15!UBERON:0001285;9.13e-07;15!UBERON:0007684;9.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.94e-17,78;UBERON:0002329,8.47e-15,71;UBERON:0003059,8.47e-15,71;UBERON:0007282,8.47e-15,71;UBERON:0004290,8.47e-15,71;UBERON:0009618,8.47e-15,71;UBERON:0007524,1.47e-14,73;UBERON:0003077,2.88e-14,72;UBERON:0007285,2.88e-14,72;UBERON:0003104,2.60e-13,160;UBERON:0009142,2.60e-13,160;UBERON:0005256,2.49e-12,122;UBERON:0002100,1.37e-11,199;UBERON:0002199,3.71e-11,46;UBERON:0002416,3.71e-11,46;UBERON:0000486,7.77e-11,83;UBERON:0001134,1.35e-10,62;UBERON:0002036,1.35e-10,62;UBERON:0003082,1.35e-10,62;UBERON:0002385,4.57e-10,64;UBERON:0001015,4.57e-10,64;UBERON:0000383,4.57e-10,64;UBERON:0002097,3.02e-09,41;UBERON:0003102,5.99e-08,99 | |||
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| ||
|short_description=p1@HS3ST3A1 | |short_description=p1@HS3ST3A1 | ||
}} | }} |
Latest revision as of 16:50, 18 September 2015
Short description: | p1@HS3ST3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HS3ST3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000284110, NM_006042, uc002gob.1_5end |
EntrezGene: | HS3ST3A1 |
HGNC: | 5196 |
UniProt: | Q9Y663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.93e-23 | 76 |
electrically responsive cell | 6.22e-12 | 61 |
electrically active cell | 6.22e-12 | 61 |
muscle precursor cell | 6.22e-12 | 58 |
myoblast | 6.22e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.22e-12 | 58 |
skin fibroblast | 1.37e-11 | 23 |
muscle cell | 5.57e-11 | 55 |
mesodermal cell | 1.70e-08 | 121 |
smooth muscle cell | 1.71e-08 | 43 |
smooth muscle myoblast | 1.71e-08 | 43 |
multi fate stem cell | 7.79e-08 | 427 |
preadipocyte | 1.47e-07 | 12 |
stem cell | 2.73e-07 | 441 |
somatic stem cell | 3.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.94e-17 | 78 |
somite | 8.47e-15 | 71 |
presomitic mesoderm | 8.47e-15 | 71 |
presumptive segmental plate | 8.47e-15 | 71 |
dermomyotome | 8.47e-15 | 71 |
trunk paraxial mesoderm | 8.47e-15 | 71 |
dense mesenchyme tissue | 1.47e-14 | 73 |
paraxial mesoderm | 2.88e-14 | 72 |
presumptive paraxial mesoderm | 2.88e-14 | 72 |
mesenchyme | 2.60e-13 | 160 |
entire embryonic mesenchyme | 2.60e-13 | 160 |
trunk mesenchyme | 2.49e-12 | 122 |
trunk | 1.37e-11 | 199 |
integument | 3.71e-11 | 46 |
integumental system | 3.71e-11 | 46 |
multilaminar epithelium | 7.77e-11 | 83 |
skeletal muscle tissue | 1.35e-10 | 62 |
striated muscle tissue | 1.35e-10 | 62 |
myotome | 1.35e-10 | 62 |
muscle tissue | 4.57e-10 | 64 |
musculature | 4.57e-10 | 64 |
musculature of body | 4.57e-10 | 64 |
skin of body | 3.02e-09 | 41 |
surface structure | 5.99e-08 | 99 |