FFCP PHASE1:Hg19::chr17:13505119..13505130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9955 | |EntrezGene=9955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5196 | |HGNC=5196 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y663 | |UniProt=Q9Y663 | ||
|association_with_transcript=113bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | |association_with_transcript=113bp_to_ENST00000284110,NM_006042,uc002gob.1_5end | ||
|cluster_id=chr17:13505119..13505130,- | |||
|description=CAGE_peak_3_at_HS3ST3A1_5end | |description=CAGE_peak_3_at_HS3ST3A1_5end | ||
|id=chr17:13505119..13505130,- | |id=chr17:13505119..13505130,- | ||
|ontology_enrichment_celltype=CL:0000055!2.41e-21!180;CL:0000057!1.07e-14!75;CL:0002620!1.03e-13!23;CL:0000144!1.03e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.41e-21!180;CL:0000057!1.07e-14!75;CL:0002620!1.03e-13!23;CL:0000144!1.03e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.28e-10;23!CL:0000047;2.50e-09;2!CL:0002600;2.50e-09;2!CL:0000057;4.00e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-10,76;CL:0002620,1.71e-10,23;CL:0002600,1.45e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.45e-08;5!DOID:450;1.45e-08;5!DOID:66;1.45e-08;5!DOID:423;1.45e-08;5!DOID:0080000;1.45e-08;5!DOID:11722;1.45e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.67e-08,5;DOID:450,1.67e-08,5;DOID:66,1.67e-08,5;DOID:423,1.67e-08,5;DOID:0080000,1.67e-08,5;DOID:11722,1.67e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-10!365;UBERON:0002199!2.24e-10!45;UBERON:0002416!2.24e-10!45;UBERON:0004290!2.22e-08!70;UBERON:0002097!2.83e-08!40;UBERON:0000914!1.84e-07!83;UBERON:0002329!1.84e-07!83;UBERON:0003077!1.84e-07!83;UBERON:0003059!1.84e-07!83;UBERON:0007282!1.84e-07!83;UBERON:0009618!1.84e-07!83;UBERON:0007285!1.84e-07!83;UBERON:0005256!2.40e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.28e-07;41!UBERON:0002203;8.63e-07;6!UBERON:0001768;8.63e-07;6!UBERON:0002200;8.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.57e-09,46;UBERON:0002416,6.57e-09,46;UBERON:0002097,2.37e-08,41;UBERON:0002203,7.15e-07,6;UBERON:0001768,7.15e-07,6;UBERON:0002200,7.15e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,2.52687949370732,0.261185628199839,0.982935746006035,0,0,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.77383517970051,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,1.34503812496621,0.117434498643765,1.13311061057692,0.421352420106746,0.204154171254893,0,0,1.18800285728205,0,1.82032272387605,0.718618141816238,0,0.375355559615893,0,0.438977620880838,0,0,0,0.538168907066586,0.213557388818567,1.27159140695737,3.00091096084402,2.26715564324566,0.515281080091258,0,1.5189869901714,1.26668106709558,0.504867548488229,0.368199594569197,0.484938170456436,1.06502877754984,0.806016785821122,0.67824236924195,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,1.41849132023278,0,0,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.895304816199478,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.2276957863045,1.96462066103151,0,0,0.482561763430822,0,0.771048469013278,0.532685175939381,1.31403449622095,0,1.51073491997947,0,0,0,0.34444334449382,0.546273504020151,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.527758144464379,0,0,1.0795795805107,0,0.541892875087706,1.00337954770971,0,0,0.671624264166535,0,0,0,0.984043937099117,0.650756789328606,0,1.19040304263846,0.907604499126468,0,0,0,0.096670718292122,0.154048617114644,0.921022048356777,0.827019434907183,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0.532306030317022,1.73986598415015,0,0,0,0,0.38126038784765,0.767693373934002,0.42793898803392,0,0,1.07923474549989,0.54907405947211,0.706874414074119,0,0,0,1.95053495635836,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,1.73632660280006,1.31178950409327,0,0,0.563391205064483,0,0,0,1.77380532035299,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0.20453736500431,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,1.02547850262301,0,0,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.901940516486955,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,1.64450309576101,1.19228767021794,0,0,0,0,0,0,0,0,0,0.745515213392595,0,3.66941356398758,3.24268823568233,0,3.46740707881823,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0.653174720218818,5.98650957812437,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.941063278792687,0,0,1.19403842309499,0.467426619694449,0,0,0,0,0.457680136793847,0,0.15543720058278,0.443565449968902,0.477890301491107,0.449803112163605,0.155262956876259,0,1.06336685823198,0.521745061811734,0.450772826991655,0,0.406870733204662,0,0.966695013382396,0,0.398095888698616,0,0.686791410365586,0,0,0.963099152036517,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0.926404341482917,0.438568099157414,1.59020231351293,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,1.3807198521202,0.198916222116275,0,3.22728109925632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.378499274505237,0.98339014767326,3.54755802832024,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,2.52687949370732,0.261185628199839,0.982935746006035,0,0,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.77383517970051,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,1.34503812496621,0.117434498643765,1.13311061057692,0.421352420106746,0.204154171254893,0,0,1.18800285728205,0,1.82032272387605,0.718618141816238,0,0.375355559615893,0,0.438977620880838,0,0,0,0.538168907066586,0.213557388818567,1.27159140695737,3.00091096084402,2.26715564324566,0.515281080091258,0,1.5189869901714,1.26668106709558,0.504867548488229,0.368199594569197,0.484938170456436,1.06502877754984,0.806016785821122,0.67824236924195,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,1.41849132023278,0,0,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.895304816199478,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.2276957863045,1.96462066103151,0,0,0.482561763430822,0,0.771048469013278,0.532685175939381,1.31403449622095,0,1.51073491997947,0,0,0,0.34444334449382,0.546273504020151,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.527758144464379,0,0,1.0795795805107,0,0.541892875087706,1.00337954770971,0,0,0.671624264166535,0,0,0,0.984043937099117,0.650756789328606,0,1.19040304263846,0.907604499126468,0,0,0,0.096670718292122,0.154048617114644,0.921022048356777,0.827019434907183,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0.532306030317022,1.73986598415015,0,0,0,0,0.38126038784765,0.767693373934002,0.42793898803392,0,0,1.07923474549989,0.54907405947211,0.706874414074119,0,0,0,1.95053495635836,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,1.73632660280006,1.31178950409327,0,0,0.563391205064483,0,0,0,1.77380532035299,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0.20453736500431,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,1.02547850262301,0,0,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.901940516486955,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,1.64450309576101,1.19228767021794,0,0,0,0,0,0,0,0,0,0.745515213392595,0,3.66941356398758,3.24268823568233,0,3.46740707881823,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0.653174720218818,5.98650957812437,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.941063278792687,0,0,1.19403842309499,0.467426619694449,0,0,0,0,0.457680136793847,0,0.15543720058278,0.443565449968902,0.477890301491107,0.449803112163605,0.155262956876259,0,1.06336685823198,0.521745061811734,0.450772826991655,0,0.406870733204662,0,0.966695013382396,0,0.398095888698616,0,0.686791410365586,0,0,0.963099152036517,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0.926404341482917,0.438568099157414,1.59020231351293,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,1.3807198521202,0.198916222116275,0,3.22728109925632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.378499274505237,0.98339014767326,3.54755802832024,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@HS3ST3A1 | |short_description=p3@HS3ST3A1 | ||
}} | }} |
Latest revision as of 16:48, 18 September 2015
Short description: | p3@HS3ST3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HS3ST3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_ENST00000284110, NM_006042, uc002gob.1_5end |
EntrezGene: | HS3ST3A1 |
HGNC: | 5196 |
UniProt: | Q9Y663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-10 | 76 |
skin fibroblast | 1.71e-10 | 23 |
smooth muscle cell of trachea | 1.45e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
integument | 6.57e-09 | 46 |
integumental system | 6.57e-09 | 46 |
skin of body | 2.37e-08 | 41 |
vasculature of eye | 7.15e-07 | 6 |
uvea | 7.15e-07 | 6 |
vasculature of head | 7.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.67e-08 | 5 |
myotonic disease | 1.67e-08 | 5 |
muscle tissue disease | 1.67e-08 | 5 |
myopathy | 1.67e-08 | 5 |
muscular disease | 1.67e-08 | 5 |
myotonic dystrophy | 1.67e-08 | 5 |