FFCP PHASE1:Hg19::chr20:48100770..48100790,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3745 | |EntrezGene=3745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6231 | |HGNC=6231 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-280bp_to_uc002xus.1_5end | |association_with_transcript=-280bp_to_uc002xus.1_5end | ||
|cluster_id=chr20:48100770..48100790,- | |||
|coexpression_cluster_id=C2191 | |||
|description=CAGE_peak_2_at_KCNB1_5end | |description=CAGE_peak_2_at_KCNB1_5end | ||
|id=chr20:48100770..48100790,- | |id=chr20:48100770..48100790,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.91e-11;82!UBERON:0003056;7.28e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-57!115;UBERON:0001017!5.78e-41!82;UBERON:0000955!6.78e-41!69;UBERON:0006238!6.78e-41!69;UBERON:0000073!5.29e-40!94;UBERON:0001016!5.29e-40!94;UBERON:0005743!7.45e-40!86;UBERON:0002616!5.62e-36!59;UBERON:0001049!1.75e-35!57;UBERON:0005068!1.75e-35!57;UBERON:0006241!1.75e-35!57;UBERON:0007135!1.75e-35!57;UBERON:0002780!1.68e-31!41;UBERON:0001890!1.68e-31!41;UBERON:0006240!1.68e-31!41;UBERON:0003080!1.92e-30!42;UBERON:0001893!7.35e-26!34;UBERON:0002020!1.50e-25!34;UBERON:0003528!1.50e-25!34;UBERON:0003075!3.05e-25!86;UBERON:0007284!3.05e-25!86;UBERON:0002791!1.18e-24!33;UBERON:0002346!1.84e-24!90;UBERON:0001869!2.16e-24!32;UBERON:0000153!3.79e-24!129;UBERON:0007811!3.79e-24!129;UBERON:0000033!1.36e-23!123;UBERON:0004121!4.47e-21!169;UBERON:0000924!7.73e-21!173;UBERON:0006601!7.73e-21!173;UBERON:0002619!1.75e-20!22;UBERON:0003056!9.10e-20!61;UBERON:0000956!5.05e-19!25;UBERON:0000203!5.05e-19!25;UBERON:0001950!2.06e-18!20;UBERON:0000475!8.06e-10!365;UBERON:0000025!3.22e-09!194;UBERON:0000200!4.39e-09!6;UBERON:0004111!2.39e-08!241;UBERON:0000477!2.40e-08!286;UBERON:0000481!3.80e-08!347;UBERON:0002308!5.86e-08!9;UBERON:0000125!5.86e-08!9;UBERON:0000922!2.76e-07!612;UBERON:0000062!3.38e-07!511;UBERON:0004732!4.43e-07!13;UBERON:0001894!4.95e-07!7;UBERON:0006222!4.95e-07!7;UBERON:0000483!5.15e-07!309;UBERON:0002021!7.43e-07!5;UBERON:0000119!9.42e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.01e-38;22!UBERON:0001869;3.72e-36;32!UBERON:0002780;1.18e-35;41!UBERON:0001890;1.18e-35;41!UBERON:0001893;8.94e-34;34!UBERON:0001950;1.01e-33;20!UBERON:0002791;3.27e-33;32!UBERON:0000956;8.58e-33;25!UBERON:0000203;8.58e-33;25!UBERON:0003528;2.15e-29;34!UBERON:0002020;2.15e-29;34!UBERON:0000073;7.91e-26;53!UBERON:0002616;7.91e-26;53!UBERON:0000955;5.04e-23;68!UBERON:0001017;1.84e-21;75!UBERON:0000200;1.60e-16;6!UBERON:0001016;2.94e-15;83!UBERON:0007023;2.30e-13;114!UBERON:0001894;7.18e-13;7!UBERON:0003296;6.01e-11;4!UBERON:0010133;6.01e-11;4!UBERON:0001871;2.25e-09;6!UBERON:0001872;2.38e-09;5!UBERON:0001870;4.00e-09;3!UBERON:0002021;6.03e-09;5!UBERON:0000349;2.55e-08;5!UBERON:0011216;1.20e-07;132!UBERON:0002420;6.17e-07;9!UBERON:0007245;6.17e-07;9!UBERON:0010009;6.17e-07;9!UBERON:0010011;6.17e-07;9!UBERON:0000454;6.17e-07;9!UBERON:0001905;7.39e-07;2!UBERON:0002757;7.39e-07;2!UBERON:0010134;7.39e-07;2!UBERON:0005408;7.39e-07;2!UBERON:0001899;7.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.76e-49,41;UBERON:0001890,3.76e-49,41;UBERON:0003080,3.76e-49,41;UBERON:0006240,3.76e-49,41;UBERON:0000955,2.53e-46,68;UBERON:0006238,2.53e-46,68;UBERON:0007023,4.19e-45,114;UBERON:0000073,4.02e-44,53;UBERON:0002616,4.02e-44,53;UBERON:0001049,2.84e-41,56;UBERON:0005068,2.84e-41,56;UBERON:0006241,2.84e-41,56;UBERON:0007135,2.84e-41,56;UBERON:0001016,8.91e-41,89;UBERON:0001869,1.51e-40,32;UBERON:0001017,1.34e-39,81;UBERON:0001893,8.32e-38,34;UBERON:0002619,1.13e-37,22;UBERON:0003056,2.36e-37,61;UBERON:0002791,7.29e-37,32;UBERON:0003528,2.35e-34,34;UBERON:0002020,2.35e-34,34;UBERON:0001950,1.48e-33,20;UBERON:0003075,9.62e-33,82;UBERON:0007284,9.62e-33,82;UBERON:0000956,1.16e-32,25;UBERON:0000203,1.16e-32,25;UBERON:0002346,9.67e-31,86;UBERON:0010371,1.21e-23,104;UBERON:0011216,6.16e-23,223;UBERON:0004121,4.79e-19,171;UBERON:0000924,4.79e-19,171;UBERON:0006601,4.79e-19,171;UBERON:0010314,6.78e-19,132;UBERON:0000200,1.69e-16,6;UBERON:0001894,6.32e-13,7;UBERON:0006222,6.32e-13,7;UBERON:0000025,2.35e-11,192;UBERON:0003296,6.96e-11,4;UBERON:0010133,6.96e-11,4;UBERON:0001872,2.27e-09,5;UBERON:0001871,2.80e-09,6;UBERON:0001870,4.47e-09,3;UBERON:0002021,6.71e-09,5;UBERON:0004111,6.76e-09,240;UBERON:0000349,2.38e-08,5;UBERON:0000483,3.21e-07,306;UBERON:0000119,4.82e-07,309;UBERON:0002420,5.27e-07,9;UBERON:0007245,5.27e-07,9;UBERON:0010009,5.27e-07,9;UBERON:0010011,5.27e-07,9;UBERON:0000454,5.27e-07,9;UBERON:0001905,7.32e-07,2;UBERON:0002757,7.32e-07,2;UBERON:0010134,7.32e-07,2;UBERON:0005408,7.32e-07,2;UBERON:0001899,7.32e-07,2;UBERON:0002784,9.18e-07,4 | |||
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|short_description=p2@KCNB1 | |short_description=p2@KCNB1 | ||
}} | }} |
Latest revision as of 19:12, 16 September 2015
Short description: | p2@KCNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNB1_5end |
Coexpression cluster: | C2191_pineal_medial_occipital_parietal_middle_temporal_postcentral |
Association with transcript: | -280bp_to_uc002xus.1_5end |
EntrezGene: | KCNB1 |
HGNC: | 6231 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data