FFCP PHASE1:Hg19::chr16:84538185..84538196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84538185..84538196,- | |||
|description=CAGE_peak_at_chr16:84538185..84538196,- | |description=CAGE_peak_at_chr16:84538185..84538196,- | ||
|id=chr16:84538185..84538196,- | |id=chr16:84538185..84538196,- | ||
|ontology_enrichment_celltype=CL:0000066!1.20e-21!254;CL:0002076!3.75e-13!43;CL:0000223!5.66e-10!59;CL:0000076!1.91e-09!62;CL:0002368!4.20e-09!13;CL:0002251!1.19e-08!21;CL:0000220!4.51e-07!246;CL:0002321!7.52e-07!248 | |ontology_enrichment_celltype=CL:0000066!1.20e-21!254;CL:0002076!3.75e-13!43;CL:0000223!5.66e-10!59;CL:0000076!1.91e-09!62;CL:0002368!4.20e-09!13;CL:0002251!1.19e-08!21;CL:0000220!4.51e-07!246;CL:0002321!7.52e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.77e-15;42!CL:0002251;1.97e-13;20!CL:0002328;3.59e-11;3!CL:0002621;3.59e-11;3!CL:0002368;1.27e-09;13!CL:0000511;1.81e-09;1!CL:0002625;1.81e-09;1!CL:0000216;1.81e-09;1!CL:0002252;5.30e-09;1!CL:0002202;3.29e-08;9!CL:0002632;3.29e-08;9!CL:0002188;4.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.44e-20,42;CL:0000223,4.12e-14,58;CL:0002251,1.95e-13,20;CL:0002328,2.78e-11,3;CL:0002621,4.66e-11,3;CL:0000066,8.55e-10,253;CL:0002368,1.39e-09,13;CL:0000511,1.89e-09,1;CL:0002625,1.89e-09,1;CL:0000216,1.89e-09,1;CL:0002252,4.54e-09,1;CL:0002202,3.64e-08,9;CL:0002632,3.64e-08,9;CL:0002188,3.25e-07,5;CL:0000076,7.02e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;1.81e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.39e-09!106;DOID:0050687!7.42e-09!143;DOID:1749!1.75e-08!14 | |ontology_enrichment_disease=DOID:305!1.39e-09!106;DOID:0050687!7.42e-09!143;DOID:1749!1.75e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.36e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.11e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0001004!3.01e-07!72;UBERON:0001007!6.73e-07!155;UBERON:0001555!6.73e-07!155;UBERON:0007026!6.73e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0001004!3.01e-07!72;UBERON:0001007!6.73e-07!155;UBERON:0001555!6.73e-07!155;UBERON:0007026!6.73e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.59e-11;3!UBERON:0002031;3.59e-11;3!UBERON:0001949;3.59e-11;3!UBERON:0000161;4.84e-10;19!UBERON:0000166;4.84e-10;19!UBERON:0003729;9.29e-10;13!UBERON:0001136;1.81e-09;1!UBERON:0001343;1.81e-09;1!UBERON:0004910;1.81e-09;1!UBERON:0004813;1.81e-09;1!UBERON:0000997;5.30e-09;1!UBERON:0005056;5.30e-09;1!UBERON:0004176;5.30e-09;1!UBERON:0003343;8.01e-09;4!UBERON:0004785;8.01e-09;4!UBERON:0004807;1.50e-08;22!UBERON:0002185;4.84e-07;5!UBERON:0000165;9.52e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.78e-11,3;UBERON:0002031,2.78e-11,3;UBERON:0001949,4.66e-11,3;UBERON:0003729,1.06e-09,13;UBERON:0001136,1.89e-09,1;UBERON:0001343,1.89e-09,1;UBERON:0004910,1.89e-09,1;UBERON:0005154,1.89e-09,1;UBERON:0005295,1.89e-09,1;UBERON:0004813,1.89e-09,1;UBERON:0005297,1.89e-09,1;UBERON:0005294,1.89e-09,1;UBERON:0010141,1.89e-09,1;UBERON:0005891,1.89e-09,1;UBERON:0003343,8.19e-09,4;UBERON:0004785,8.19e-09,4;UBERON:0000997,9.17e-09,1;UBERON:0005056,9.17e-09,1;UBERON:0001004,9.36e-09,74;UBERON:0000166,1.24e-08,22;UBERON:0000161,3.00e-07,36;UBERON:0002185,4.16e-07,5;UBERON:0004876,4.99e-07,11 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.25326102332916,0.529636723252875,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0,0,0,1.15956511897978,0.545492241181669,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.768251997860379,0,0.402115889646523,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,0.850650583454319,0.895585227028483,0.871901815541886,0,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0,0.657017248110473,0,0,0,0.802025881213139,1.38121483403844,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.541892875087706,0,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,3.21367859688319,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0,0.991709492165869,0.384380134730212,1.27612712494584,0.910420027699949,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.606547444719948,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.682760689712998,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.359030577639089,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0,0,0,0.104421949505455,0,0,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,1.07791637155815,2.17648016451006,0,0,0.290268993867255,0.0730893170861856,0,0.678923115418936,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0,0.39961921916426,0.144090417154106,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.670869375198532,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0,1.08599920350743,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,1.52322084867518,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.926089897295336,0.244736704506468,0.895444205407437,0,0.438568099157414,0.883445729729405,0.578742114812744,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0.845248493434508,0,0,0.172214979660816,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,3.53331786603692,0,0.733714394086716,1.27078232765372,0,0.690359926060101,0,0,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.443511850813194,0,0,0.339848664884159,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.647782773655864,0,0.571812353413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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.25326102332916,0.529636723252875,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0,0,0,1.15956511897978,0.545492241181669,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.768251997860379,0,0.402115889646523,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,0.850650583454319,0.895585227028483,0.871901815541886,0,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0,0.657017248110473,0,0,0,0.802025881213139,1.38121483403844,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.541892875087706,0,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,3.21367859688319,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0,0.991709492165869,0.384380134730212,1.27612712494584,0.910420027699949,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.606547444719948,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.682760689712998,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.359030577639089,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0,0,0,0.104421949505455,0,0,0,0,0.782658475728359,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0,0,1.07791637155815,2.17648016451006,0,0,0.290268993867255,0.0730893170861856,0,0.678923115418936,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0,0.39961921916426,0.144090417154106,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.670869375198532,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0,1.08599920350743,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,1.52322084867518,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.926089897295336,0.244736704506468,0.895444205407437,0,0.438568099157414,0.883445729729405,0.578742114812744,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0.845248493434508,0,0,0.172214979660816,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,3.53331786603692,0,0.733714394086716,1.27078232765372,0,0.690359926060101,0,0,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.443511850813194,0,0,0.339848664884159,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.647782773655864,0,0.571812353413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| ||
|short_description=p@chr16:84538185..84538196,- | |short_description=p@chr16:84538185..84538196,- | ||
}} | }} |
Latest revision as of 12:53, 25 July 2015
Short description: | p@chr16:84538185..84538196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84538185..84538196, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.44e-20 | 42 |
endodermal cell | 4.12e-14 | 58 |
epithelial cell of alimentary canal | 1.95e-13 | 20 |
bronchial epithelial cell | 2.78e-11 | 3 |
gingival epithelial cell | 4.66e-11 | 3 |
epithelial cell | 8.55e-10 | 253 |
respiratory epithelial cell | 1.39e-09 | 13 |
androgen binding protein secreting cell | 1.89e-09 | 1 |
seminiferous tubule epithelial cell | 1.89e-09 | 1 |
Sertoli cell | 1.89e-09 | 1 |
epithelial cell of esophagus | 4.54e-09 | 1 |
epithelial cell of tracheobronchial tree | 3.64e-08 | 9 |
epithelial cell of lower respiratory tract | 3.64e-08 | 9 |
glomerular endothelial cell | 3.25e-07 | 5 |
squamous epithelial cell | 7.02e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.78e-11 | 3 |
epithelium of bronchus | 2.78e-11 | 3 |
gingival epithelium | 4.66e-11 | 3 |
mouth mucosa | 1.06e-09 | 13 |
mesothelium | 1.89e-09 | 1 |
seminiferous tubule of testis | 1.89e-09 | 1 |
epithelium of male gonad | 1.89e-09 | 1 |
epithelial cord | 1.89e-09 | 1 |
sex cord | 1.89e-09 | 1 |
seminiferous tubule epithelium | 1.89e-09 | 1 |
testis sex cord | 1.89e-09 | 1 |
genital ridge | 1.89e-09 | 1 |
primitive sex cord of indifferent gonad | 1.89e-09 | 1 |
coelomic epithelium | 1.89e-09 | 1 |
mucosa of oral region | 8.19e-09 | 4 |
respiratory system mucosa | 8.19e-09 | 4 |
mammalian vulva | 9.17e-09 | 1 |
external female genitalia | 9.17e-09 | 1 |
respiratory system | 9.36e-09 | 74 |
oral opening | 1.24e-08 | 22 |
orifice | 3.00e-07 | 36 |
bronchus | 4.16e-07 | 5 |
urogenital ridge | 4.99e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.11e-20 | 14 |