FFCP PHASE1:Hg19::chr20:33462785..33462799,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55902 | |EntrezGene=55902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |HGNC=15814 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDJ9 | |UniProt=F8WDJ9 | ||
|association_with_transcript=3bp_to_ENST00000475459_5end | |association_with_transcript=3bp_to_ENST00000475459_5end | ||
|cluster_id=chr20:33462785..33462799,+ | |||
|coexpression_cluster_id=C3800 | |||
|description=CAGE_peak_4_at_ACSS2_5end | |description=CAGE_peak_4_at_ACSS2_5end | ||
|id=chr20:33462785..33462799,+ | |id=chr20:33462785..33462799,+ | ||
|ontology_enrichment_celltype=CL:0002619!2.09e-11!3;CL:0000235!1.71e-09!10;CL:0000181!8.14e-08!12;CL:0000417!8.14e-08!12;CL:0000668!8.14e-08!12;CL:0000414!8.14e-08!12;CL:0000412!8.14e-08!12;CL:0000182!8.14e-08!12 | |ontology_enrichment_celltype=CL:0002619!2.09e-11!3;CL:0000235!1.71e-09!10;CL:0000181!8.14e-08!12;CL:0000417!8.14e-08!12;CL:0000668!8.14e-08!12;CL:0000414!8.14e-08!12;CL:0000412!8.14e-08!12;CL:0000182!8.14e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.02e-27;6!CL:0000182;2.35e-13;12!CL:0000840;4.79e-10;5!CL:0000990;7.49e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.48e-27,6;CL:0000182,2.07e-13,12;CL:0000840,4.29e-10,5;CL:0001029,4.29e-10,5;CL:0002194,3.12e-07,59;CL:0000576,3.12e-07,59;CL:0000040,3.12e-07,59;CL:0000559,3.12e-07,59;CL:0002009,5.92e-07,61;CL:0000990,6.97e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.18e-20;11!UBERON:0009497;6.05e-17;13!UBERON:0003104;9.31e-12;31!UBERON:0006242;1.44e-07;1!UBERON:0001041;4.65e-07;30 | |||
|ontology_enrichment_disease=DOID:3493!7.19e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.14e-14!35;UBERON:0005057!3.36e-12!26;UBERON:0009854!1.17e-11!23;UBERON:0004921!1.92e-11!129;UBERON:0004185!1.92e-11!129;UBERON:0009497!1.29e-10!25;UBERON:0000015!1.29e-10!25;UBERON:0002423!1.29e-10!25;UBERON:0006235!1.29e-10!25;UBERON:0004161!1.29e-10!25;UBERON:0001155!1.74e-10!9;UBERON:0009856!4.07e-10!26;UBERON:0005172!6.66e-10!55;UBERON:0005173!6.66e-10!55;UBERON:0008835!9.23e-10!22;UBERON:0003894!9.23e-10!22;UBERON:0001007!1.74e-09!155;UBERON:0001555!1.74e-09!155;UBERON:0007026!1.74e-09!155;UBERON:0000160!1.87e-09!27;UBERON:0002107!5.36e-09!19;UBERON:0006925!5.36e-09!19;UBERON:0008836!5.36e-09!19;UBERON:0002405!6.69e-09!115;UBERON:0003929!9.93e-09!54;UBERON:0002417!1.26e-08!61;UBERON:0000916!1.26e-08!61;UBERON:0000059!1.64e-08!11;UBERON:0007499!2.00e-08!25;UBERON:0004119!3.25e-08!169;UBERON:0000925!3.25e-08!169;UBERON:0006595!3.25e-08!169;UBERON:0000945!5.88e-07!8;UBERON:0010039!5.88e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.77e-16;19!UBERON:0006925;7.77e-16;19!UBERON:0002423;2.57e-15;25!UBERON:0000160;4.86e-13;17!UBERON:0005409;4.42e-10;22!UBERON:0002365;5.49e-09;31!UBERON:0002330;5.49e-09;31!UBERON:0002368;7.54e-08;33!UBERON:0002171;1.44e-07;1!UBERON:0006518;1.44e-07;1!UBERON:0008949;1.44e-07;1!UBERON:0000101;1.44e-07;1!UBERON:0002167;1.44e-07;1!UBERON:0001155;2.33e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.03e-16,19;UBERON:0006925,6.03e-16,19;UBERON:0008836,6.03e-16,19;UBERON:0009497,2.24e-15,25;UBERON:0000015,2.24e-15,25;UBERON:0002423,2.24e-15,25;UBERON:0006235,2.24e-15,25;UBERON:0004161,2.24e-15,25;UBERON:0008835,1.17e-13,22;UBERON:0003894,1.17e-13,22;UBERON:0000160,4.71e-13,17;UBERON:0009854,4.99e-13,23;UBERON:0007499,6.42e-12,25;UBERON:0009856,1.99e-11,26;UBERON:0003929,3.14e-10,54;UBERON:0005172,3.51e-10,54;UBERON:0005173,3.51e-10,54;UBERON:0002365,1.90e-09,31;UBERON:0002330,1.90e-09,31;UBERON:0004921,2.29e-09,118;UBERON:0002417,5.38e-09,60;UBERON:0000916,5.38e-09,60;UBERON:0005409,7.36e-09,25;UBERON:0002368,2.85e-08,35;UBERON:0001007,3.32e-08,145;UBERON:0001555,3.32e-08,145;UBERON:0007026,3.32e-08,145;UBERON:0002171,1.64e-07,1;UBERON:0006518,1.64e-07,1;UBERON:0008949,1.64e-07,1;UBERON:0000101,1.64e-07,1;UBERON:0002167,1.64e-07,1;UBERON:0005911,1.68e-07,82;UBERON:0001155,2.29e-07,9;UBERON:0004119,3.76e-07,160;UBERON:0000925,3.76e-07,160;UBERON:0006595,3.76e-07,160 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.971680998056939,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25681995367566,0,0,1.9472843619281,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,0,6.49868897349544,0,9.71608664490597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,4.44608103764552,3.86441021950693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,10.9478812418636,6.72277490225378,6.72133159426988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.483485450861,1.41547442093788,0,0,0,0,0,0,0,0,0,0,0,2.99461687736953,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90517903781507,3.97520666736664,0,0,0,0,0.213574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,8.48915739187391,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.971680998056939,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25681995367566,0,0,1.9472843619281,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,0,6.49868897349544,0,9.71608664490597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,4.44608103764552,3.86441021950693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,10.9478812418636,6.72277490225378,6.72133159426988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.483485450861,1.41547442093788,0,0,0,0,0,0,0,0,0,0,0,2.99461687736953,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90517903781507,3.97520666736664,0,0,0,0,0.213574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,8.48915739187391,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@ACSS2 | |short_description=p4@ACSS2 | ||
}} | }} |
Latest revision as of 18:24, 15 September 2015
Short description: | p4@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACSS2_5end |
Coexpression cluster: | C3800_Hepatocyte_colon_small_Intestinal_testicular_liver_adenocarcinoma |
Association with transcript: | 3bp_to_ENST00000475459_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | F8WDJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.48e-27 | 6 |
hepatocyte | 2.07e-13 | 12 |
immature conventional dendritic cell | 4.29e-10 | 5 |
common dendritic progenitor | 4.29e-10 | 5 |
monopoietic cell | 3.12e-07 | 59 |
monocyte | 3.12e-07 | 59 |
monoblast | 3.12e-07 | 59 |
promonocyte | 3.12e-07 | 59 |
macrophage dendritic cell progenitor | 5.92e-07 | 61 |
conventional dendritic cell | 6.97e-07 | 8 |