FFCP PHASE1:Hg19::chr11:6677018..6677065,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:6677018..6677065,-
|short_description=p1@DCHS1
|description=CAGE_peak_1_at_DCHS1_5end
|association_with_transcript=8bp_to_NM_003737,uc001mem.1_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8642 | |EntrezGene=8642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13681 | |HGNC=13681 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JQ0 | |UniProt=Q96JQ0 | ||
|association_with_transcript=8bp_to_NM_003737,uc001mem.1_5end | |||
|cluster_id=chr11:6677018..6677065,- | |||
|description=CAGE_peak_1_at_DCHS1_5end | |||
|id=chr11:6677018..6677065,- | |||
|ontology_enrichment_celltype=CL:0000115!2.04e-12!35;CL:0002139!3.37e-11!24;CL:0002078!2.33e-09!44;CL:0000071!1.35e-08!18;CL:0002546!1.35e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.92e-12;24!CL:0000115;5.90e-12;36!CL:0000071;1.90e-09;18!CL:0002078;6.29e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.75e-14,36;CL:0002139,1.33e-12,24;CL:0002078,2.88e-10,45;CL:0000071,1.27e-09,18;CL:0002546,1.27e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.90e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-15!94;UBERON:0001016!1.10e-15!94;UBERON:0007023!2.20e-15!115;UBERON:0001017!1.00e-13!82;UBERON:0005743!2.10e-13!86;UBERON:0000924!3.11e-12!173;UBERON:0006601!3.11e-12!173;UBERON:0002346!3.47e-12!90;UBERON:0000477!6.54e-12!286;UBERON:0004121!2.64e-11!169;UBERON:0003075!3.95e-11!86;UBERON:0007284!3.95e-11!86;UBERON:0002049!6.80e-11!79;UBERON:0007798!6.80e-11!79;UBERON:0004111!2.07e-10!241;UBERON:0001049!4.14e-10!57;UBERON:0005068!4.14e-10!57;UBERON:0006241!4.14e-10!57;UBERON:0007135!4.14e-10!57;UBERON:0000955!5.94e-10!69;UBERON:0006238!5.94e-10!69;UBERON:0002616!7.39e-10!59;UBERON:0000025!8.60e-10!194;UBERON:0001009!4.34e-09!113;UBERON:0004535!9.14e-09!110;UBERON:0000055!1.02e-08!69;UBERON:0001986!1.35e-08!18;UBERON:0004638!1.35e-08!18;UBERON:0004852!1.35e-08!18;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129;UBERON:0000119!4.01e-08!312;UBERON:0000483!6.80e-08!309;UBERON:0000033!1.25e-07!123;UBERON:0000468!1.25e-07!659;UBERON:0003056!3.70e-07!61;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60;UBERON:0004872!7.61e-07!84;UBERON:0003080!9.23e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.90e-09;18!UBERON:0001986;1.90e-09;18!UBERON:0004852;1.90e-09;18!UBERON:0000922;2.31e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-14,114;UBERON:0001016,8.19e-14,89;UBERON:0001017,2.90e-12,81;UBERON:0002346,1.92e-11,86;UBERON:0004121,8.82e-11,171;UBERON:0000924,8.82e-11,171;UBERON:0006601,8.82e-11,171;UBERON:0003075,1.24e-10,82;UBERON:0007284,1.24e-10,82;UBERON:0011216,8.94e-10,223;UBERON:0004111,1.07e-09,240;UBERON:0004638,1.27e-09,18;UBERON:0001986,1.27e-09,18;UBERON:0004852,1.27e-09,18;UBERON:0002049,2.68e-09,78;UBERON:0007798,2.68e-09,78;UBERON:0010314,4.38e-09,132;UBERON:0001049,4.55e-09,56;UBERON:0005068,4.55e-09,56;UBERON:0006241,4.55e-09,56;UBERON:0007135,4.55e-09,56;UBERON:0000073,6.41e-09,53;UBERON:0002616,6.41e-09,53;UBERON:0000955,1.24e-08,68;UBERON:0006238,1.24e-08,68;UBERON:0000025,1.39e-08,192;UBERON:0000055,5.10e-08,68;UBERON:0001009,1.12e-07,112;UBERON:0004535,1.40e-07,109;UBERON:0010371,1.77e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,6.31208400096238,3.64537113300707,1.34465029290355,1.80808358407193,3.65155045193687,2.92759679274304,20.9305798730539,14.2800483870977,15.0458266309482,11.4494394852423,7.11747010378998,8.28581421325698,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0.293600439334847,0,0.200544447470142,1.73608696572681,0.223915474239924,0,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0,2.9506465517075,3.14408610199332,1.02800749499755,0,1.62961133316795,4.2610302516126,1.94826728407911,0,0,0.443067789167242,0,0,0,0,0,0,2.81744470007915,5.35081656179426,7.31748666634838,0.113309342697566,0.766440987203842,1.03088233644789,0,2.22995790026868,1.30216690771284,0,2.86092726247768,2.8157054453972,1.24930726552346,0.710331756132051,1.64225599384209,0.80642697289893,0.802320587350522,3.62061009706997,2.43806866313962,1.34140171940727,1.15076305659177,1.44575660953827,4.01070328508712,2.31754430337318,4.7717156823066,10.2193322763554,3.68685786939865,4.43458794925128,2.89854792787316,4.84622579341537,0,0,0,0,0,2.14641561874808,0,1.48583000531826,3.9752481473341,1.72046919021225,5.9013885273291,3.39184765154406,14.2629808311368,10.7296036356626,3.9709043641994,7.23566925674121,6.75955899104749,13.0541038978221,9.26507429351038,6.0821768457481,16.8402819708237,1.47065232138347,17.012980905517,6.07238152331742,7.4094692966636,5.63057402416611,7.66583187329416,7.59412527654503,7.5112715011467,0,0,0,1.49091585508596,0.25326102332916,0,2.86836620748814,0.354668382198357,0,0,0,2.17847724779836,5.11900553864815,1.30769522490767,3.93529311876822,6.33793516927999,8.66989297785048,0,0,0.597794722207204,2.23125547423153,2.5899671098901,4.07307339436521,0.204154171254893,2.21101771161182,0.826606249406124,8.31602000097437,4.69807165629258,4.55080680969013,1.43723628363248,4.37673896280572,3.87867411603089,0,5.70670907145089,0.30648779579902,3.45547535485173,0.453728732640084,8.9694817844431,4.27114777637135,0.211931901159562,4.80145753735044,3.50378599410692,0.772921620136887,2.41951913231067,1.68776332241266,0.779496041289589,2.77677151668526,1.56484827691909,6.46584227275248,5.68015348026583,2.92181084860157,3.05209066158878,0,0,0,1.21973706129595,1.45782745153634,2.90484857173796,4.66474747569167,1.26160425437814,2.91981887260664,12.5159625863853,3.85944562915731,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,41.3367054589803,14.0241773803446,3.7041661019826,4.41026134156626,0,0,6.49868897349544,0,0.245976877086227,0.343135620597051,0,0,0,0,11.077482380551,0,0,11.0133884726323,0.587043471179108,7.65142173133691,3.24089858803628,6.65889532821094,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.829312462163088,1.15295962733569,1.2624243342638,1.20645999155121,1.52795370223311,0,5.13217338068116,0.411309970813294,0,1.14330573052231,2.80327710863402,3.05172048183296,0.07333828582095,0.904902010304444,0,0,2.39344304926383,3.12022310734098,1.02882949704857,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.479249710983165,3.44585807502342,0,0,0,0,0,1.18218456121156,1.2937654491571,0.513372145118994,14.229298956458,48.15174592732,26.2918196344416,36.6860621082224,37.6383863475366,0,0,0,11.41030872988,1.50051156317903,2.71265023699736,0.415941723061614,0,0.157702415033935,0.234282829985426,4.51419149591578,6.82222512167955,6.2083842775503,3.98535359121262,2.58116835958384,6.16873662723388,8.81105208582333,12.6963066810017,1.86091223510599,1.50999940573032,1.28073069364133,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0.771048469013278,1.42049380250502,1.31403449622095,0,0.581051892299796,0.362578348774867,0,0,0.459257792658427,3.64182336013434,3.8026080338233,0.902399225814824,0.539107359730903,0.784349769176855,0,0.211103257785751,27.2960121770152,10.3757160218675,4.10240240594065,21.5918153766405,0.812839312631559,2.00675909541941,0.254876273045038,0,0,0,0,0,0.984043937099117,0.325378394664303,2.57602529119306,0.54941678891006,0.660075999364704,0,0,0,5.60690166094307,0,0.307007349452259,0.551346289938122,0.859361958946189,1.45016693914229,0.767039646744908,3.11612124763581,0,0,0,0,0,0,1.3940745403212,0.308033580176089,0,2.60979897622522,0.9266210955196,0,0.372158369359667,0.632758849437452,0.38126038784765,2.303080121802,1.28381696410176,1.59101623962968,0.78494864019923,1.43897966066652,3.0199073270966,2.70968525395079,0.202182481573316,0,0.421258456238981,0,0.731140468893853,6.33900880540533,1.22849920267187,1.97967604735198,5.65040583101214,8.27048015319186,0,0,0,3.27947376023316,0,1.54911749049875,0.563391205064483,2.43799298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| ||
|short_description=p1@DCHS1 | |||
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Latest revision as of 16:30, 19 September 2015
Short description: | p1@DCHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCHS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_003737, uc001mem.1_5end |
EntrezGene: | DCHS1 |
HGNC: | 13681 |
UniProt: | Q96JQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.75e-14 | 36 |
endothelial cell of vascular tree | 1.33e-12 | 24 |
meso-epithelial cell | 2.88e-10 | 45 |
blood vessel endothelial cell | 1.27e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-14 | 114 |
nervous system | 8.19e-14 | 89 |
central nervous system | 2.90e-12 | 81 |
neurectoderm | 1.92e-11 | 86 |
ectoderm-derived structure | 8.82e-11 | 171 |
ectoderm | 8.82e-11 | 171 |
presumptive ectoderm | 8.82e-11 | 171 |
neural plate | 1.24e-10 | 82 |
presumptive neural plate | 1.24e-10 | 82 |
organ system subdivision | 8.94e-10 | 223 |
anatomical conduit | 1.07e-09 | 240 |
blood vessel endothelium | 1.27e-09 | 18 |
endothelium | 1.27e-09 | 18 |
cardiovascular system endothelium | 1.27e-09 | 18 |
vasculature | 2.68e-09 | 78 |
vascular system | 2.68e-09 | 78 |
structure with developmental contribution from neural crest | 4.38e-09 | 132 |
neural tube | 4.55e-09 | 56 |
neural rod | 4.55e-09 | 56 |
future spinal cord | 4.55e-09 | 56 |
neural keel | 4.55e-09 | 56 |
regional part of nervous system | 6.41e-09 | 53 |
regional part of brain | 6.41e-09 | 53 |
brain | 1.24e-08 | 68 |
future brain | 1.24e-08 | 68 |
tube | 1.39e-08 | 192 |
vessel | 5.10e-08 | 68 |
circulatory system | 1.12e-07 | 112 |
cardiovascular system | 1.40e-07 | 109 |
ecto-epithelium | 1.77e-07 | 104 |