FFCP PHASE1:Hg19::chr20:17949425..17949444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27131 | |EntrezGene=27131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14969 | |HGNC=14969 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486039,ENST00000490175_5end | |association_with_transcript=0bp_to_ENST00000486039,ENST00000490175_5end | ||
|cluster_id=chr20:17949425..17949444,- | |||
|description=CAGE_peak_1_at_SNX5_5end | |description=CAGE_peak_1_at_SNX5_5end | ||
|id=chr20:17949425..17949444,- | |id=chr20:17949425..17949444,- | ||
|ontology_enrichment_celltype=CL:0000012!3.07e-32!682;CL:0000548!4.88e-31!679;CL:0000004!4.88e-31!679;CL:0000255!4.88e-31!679;CL:0000066!1.43e-20!254;CL:0000003!7.02e-19!722;CL:0000063!6.33e-18!578;CL:0000144!3.58e-16!625;CL:0002321!2.84e-11!248;CL:0000220!8.27e-11!246;CL:0002371!4.80e-09!591;CL:0000076!1.06e-08!62;CL:0000223!7.54e-08!59;CL:0002076!7.13e-07!43 | |ontology_enrichment_celltype=CL:0000012!3.07e-32!682;CL:0000548!4.88e-31!679;CL:0000004!4.88e-31!679;CL:0000255!4.88e-31!679;CL:0000066!1.43e-20!254;CL:0000003!7.02e-19!722;CL:0000063!6.33e-18!578;CL:0000144!3.58e-16!625;CL:0002321!2.84e-11!248;CL:0000220!8.27e-11!246;CL:0002371!4.80e-09!591;CL:0000076!1.06e-08!62;CL:0000223!7.54e-08!59;CL:0002076!7.13e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.46e-20,253;CL:0002321,3.36e-11,250;CL:0000076,1.17e-08,63;CL:0000223,6.83e-08,58;CL:0002076,6.24e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.60e-33!235;DOID:14566!2.79e-31!239;DOID:0050687!2.23e-17!143;DOID:2531!4.63e-14!51;DOID:0060083!4.63e-14!51;DOID:0050686!7.56e-14!137;DOID:305!1.38e-13!106;DOID:1240!2.24e-10!39;DOID:8692!1.65e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.57e-08;51!DOID:0060083;1.57e-08;51!DOID:1240;5.90e-08;39!DOID:8692;2.27e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.60e-33,235;DOID:14566,2.79e-31,239;DOID:0050687,2.23e-17,143;DOID:2531,4.63e-14,51;DOID:0060083,4.63e-14,51;DOID:0050686,7.56e-14,137;DOID:305,1.38e-13,106;DOID:1240,2.24e-10,39;DOID:8692,1.65e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SNX5 | |short_description=p1@SNX5 | ||
}} | }} |
Latest revision as of 06:54, 20 September 2015
Short description: | p1@SNX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000486039, ENST00000490175_5end |
EntrezGene: | SNX5 |
HGNC: | 14969 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.46e-20 | 253 |
embryonic cell | 3.36e-11 | 250 |
squamous epithelial cell | 1.17e-08 | 63 |
endodermal cell | 6.83e-08 | 58 |
endo-epithelial cell | 6.24e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.60e-33 | 235 |
disease of cellular proliferation | 2.79e-31 | 239 |
cell type cancer | 2.23e-17 | 143 |
hematologic cancer | 4.63e-14 | 51 |
immune system cancer | 4.63e-14 | 51 |
organ system cancer | 7.56e-14 | 137 |
carcinoma | 1.38e-13 | 106 |
leukemia | 2.24e-10 | 39 |
myeloid leukemia | 1.65e-07 | 31 |