FFCP PHASE1:Hg19::chr1:95392608..95392629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1266 | |EntrezGene=1266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2157 | |HGNC=2157 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHA7 | |UniProt=Q6FHA7 | ||
|association_with_transcript=8bp_to_ENST00000538964,uc010otw.1_5end | |association_with_transcript=8bp_to_ENST00000538964,uc010otw.1_5end | ||
|cluster_id=chr1:95392608..95392629,- | |||
|description=CAGE_peak_2_at_CNN3_5end | |description=CAGE_peak_2_at_CNN3_5end | ||
|id=chr1:95392608..95392629,- | |id=chr1:95392608..95392629,- | ||
|ontology_enrichment_celltype=CL:0000055!2.89e-32!180;CL:0000220!7.01e-23!246;CL:0002321!7.58e-23!248;CL:0000222!3.12e-18!119;CL:0000057!3.76e-15!75;CL:0000680!8.31e-11!57;CL:0000056!8.31e-11!57;CL:0000355!8.31e-11!57;CL:0000393!1.39e-10!60;CL:0000211!1.39e-10!60;CL:0000187!6.00e-10!54;CL:0000183!1.42e-09!59;CL:0000192!2.09e-08!42;CL:0000514!2.09e-08!42;CL:0000133!2.73e-07!59;CL:0000213!4.96e-07!57;CL:0000215!4.96e-07!57;CL:0000359!4.99e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.89e-32!180;CL:0000220!7.01e-23!246;CL:0002321!7.58e-23!248;CL:0000222!3.12e-18!119;CL:0000057!3.76e-15!75;CL:0000680!8.31e-11!57;CL:0000056!8.31e-11!57;CL:0000355!8.31e-11!57;CL:0000393!1.39e-10!60;CL:0000211!1.39e-10!60;CL:0000187!6.00e-10!54;CL:0000183!1.42e-09!59;CL:0000192!2.09e-08!42;CL:0000514!2.09e-08!42;CL:0000133!2.73e-07!59;CL:0000213!4.96e-07!57;CL:0000215!4.96e-07!57;CL:0000359!4.99e-07!32 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.79e-23,250;CL:0000222,9.96e-19,121;CL:0000057,8.32e-16,76;CL:0000680,5.93e-11,58;CL:0000056,5.93e-11,58;CL:0000355,5.93e-11,58;CL:0000393,9.87e-11,61;CL:0000211,9.87e-11,61;CL:0000187,4.34e-10,55;CL:0000192,1.57e-08,43;CL:0000514,1.57e-08,43;CL:0000213,2.69e-07,58;CL:0000215,2.69e-07,58;CL:0000133,3.12e-07,59;CL:0000359,4.52e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.24e-25!365;UBERON:0000119!3.04e-22!312;UBERON:0000483!7.35e-22!309;UBERON:0000490!5.89e-19!138;UBERON:0000481!6.47e-19!347;UBERON:0005256!6.61e-19!143;UBERON:0002100!1.40e-18!216;UBERON:0003914!1.02e-17!118;UBERON:0000477!1.34e-17!286;UBERON:0004111!1.25e-16!241;UBERON:0002049!3.78e-16!79;UBERON:0007798!3.78e-16!79;UBERON:0000468!4.84e-15!659;UBERON:0000025!8.78e-14!194;UBERON:0000467!3.41e-12!625;UBERON:0000480!6.73e-12!626;UBERON:0000914!9.11e-12!83;UBERON:0002329!9.11e-12!83;UBERON:0003077!9.11e-12!83;UBERON:0003059!9.11e-12!83;UBERON:0007282!9.11e-12!83;UBERON:0009618!9.11e-12!83;UBERON:0007285!9.11e-12!83;UBERON:0004535!1.22e-11!110;UBERON:0000055!2.68e-11!69;UBERON:0001009!2.75e-11!113;UBERON:0003104!3.25e-11!238;UBERON:0009142!3.25e-11!238;UBERON:0004872!4.23e-11!84;UBERON:0002385!3.24e-10!63;UBERON:0001015!3.24e-10!63;UBERON:0000383!3.24e-10!63;UBERON:0001134!3.37e-10!61;UBERON:0002036!3.37e-10!61;UBERON:0003082!3.37e-10!61;UBERON:0001981!3.51e-10!60;UBERON:0007500!3.51e-10!60;UBERON:0004537!3.51e-10!60;UBERON:0006965!3.51e-10!60;UBERON:0004290!7.16e-10!70;UBERON:0000922!4.64e-09!612;UBERON:0002050!7.48e-09!605;UBERON:0005423!7.48e-09!605;UBERON:0000923!1.27e-08!604;UBERON:0005291!1.27e-08!604;UBERON:0006598!1.27e-08!604;UBERON:0002532!1.27e-08!604;UBERON:0000486!1.44e-08!82;UBERON:0002417!8.04e-08!61;UBERON:0000916!8.04e-08!61;UBERON:0009569!1.89e-07!113;UBERON:0007625!2.57e-07!11;UBERON:0004121!4.06e-07!169;UBERON:0000970!4.71e-07!20;UBERON:0000019!4.97e-07!19;UBERON:0000047!4.97e-07!19;UBERON:0004088!4.97e-07!19;UBERON:0003072!4.97e-07!19;UBERON:0003071!4.97e-07!19;UBERON:0004128!4.97e-07!19;UBERON:0001637!7.16e-07!42;UBERON:0003509!7.16e-07!42;UBERON:0004572!7.16e-07!42;UBERON:0003929!8.25e-07!54;UBERON:0002107!8.40e-07!19;UBERON:0006925!8.40e-07!19;UBERON:0008836!8.40e-07!19;UBERON:0002104!8.73e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.35e-07;11!UBERON:0002049;3.71e-07;75!UBERON:0007798;3.71e-07;75!UBERON:0000970;4.12e-07;20!UBERON:0000019;4.27e-07;19!UBERON:0000047;4.27e-07;19!UBERON:0004088;4.27e-07;19!UBERON:0010230;4.27e-07;19!UBERON:0002104;8.05e-07;21!UBERON:0002107;8.69e-07;19!UBERON:0006925;8.69e-07;19 | |||
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|short_description=p2@CNN3 | |short_description=p2@CNN3 | ||
}} | }} |
Latest revision as of 23:39, 19 September 2015
Short description: | p2@CNN3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000538964, uc010otw.1_5end |
EntrezGene: | CNN3 |
HGNC: | 2157 |
UniProt: | Q6FHA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.79e-23 | 250 |
mesodermal cell | 9.96e-19 | 121 |
fibroblast | 8.32e-16 | 76 |
muscle precursor cell | 5.93e-11 | 58 |
myoblast | 5.93e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-11 | 58 |
electrically responsive cell | 9.87e-11 | 61 |
electrically active cell | 9.87e-11 | 61 |
muscle cell | 4.34e-10 | 55 |
smooth muscle cell | 1.57e-08 | 43 |
smooth muscle myoblast | 1.57e-08 | 43 |
lining cell | 2.69e-07 | 58 |
barrier cell | 2.69e-07 | 58 |
neurectodermal cell | 3.12e-07 | 59 |
vascular associated smooth muscle cell | 4.52e-07 | 32 |