FFCP PHASE1:Hg19::chr1:90287515..90287546,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55144 | |EntrezGene=55144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16992 | |HGNC=16992 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L1W4,Q96GG5 | |UniProt=Q7L1W4,Q96GG5 | ||
|association_with_transcript=35bp_to_ENST00000394593,NM_018103,uc001dnn.2_5end | |association_with_transcript=35bp_to_ENST00000394593,NM_018103,uc001dnn.2_5end | ||
|cluster_id=chr1:90287515..90287546,+ | |||
|description=CAGE_peak_7_at_LRRC8D_5end | |description=CAGE_peak_7_at_LRRC8D_5end | ||
|id=chr1:90287515..90287546,+ | |id=chr1:90287515..90287546,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.19e-07!7;CL:0000586!6.19e-07!7 | |ontology_enrichment_celltype=CL:0000039!6.19e-07!7;CL:0000586!6.19e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.26e-08;7!CL:0000586;7.26e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.01e-07,7;CL:0000586,1.01e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.88e-08;10!UBERON:0007687;6.88e-08;10 | |||
|ontology_enrichment_disease=DOID:162!1.31e-26!235;DOID:14566!1.02e-25!239;DOID:0050687!9.12e-17!143;DOID:0050686!2.83e-14!137;DOID:305!4.92e-14!106;DOID:2531!1.60e-13!51;DOID:0060083!1.60e-13!51;DOID:1240!4.85e-13!39;DOID:8692!3.46e-12!31;DOID:3095!9.94e-07!22;DOID:2994!9.94e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.62e-10;8!DOID:8692;2.22e-08;31!DOID:3095;2.74e-08;22!DOID:2994;2.74e-08;22!DOID:5409;1.32e-07;4!DOID:74;1.76e-07;2!DOID:2531;2.39e-07;51!DOID:0060083;2.39e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.09e-17,235;DOID:14566,1.96e-16,239;DOID:0050686,1.58e-12,137;DOID:2531,5.81e-12,51;DOID:0060083,5.81e-12,51;DOID:1036,9.37e-10,8;DOID:1240,4.52e-09,39;DOID:8692,1.94e-08,31;DOID:3095,2.94e-08,22;DOID:2994,2.94e-08,22;DOID:5409,9.87e-08,4;DOID:74,1.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.56e-07!169;UBERON:0000925!1.56e-07!169;UBERON:0006595!1.56e-07!169;UBERON:0001007!2.29e-07!155;UBERON:0001555!2.29e-07!155;UBERON:0007026!2.29e-07!155;UBERON:0004921!3.39e-07!129;UBERON:0004185!3.39e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.314843125254717,0,0,0,0,0,0,4.8029664359787,1.13735385989937,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,1.30979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0.236613600079688,0,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.68127715990291,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,2.11786274552562,0.459257792658427,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.32227932288782,0.960950336825531,0,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.673554789078584,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.534120355637366,4.81239927631679,0.245040215981032,0.185803175125719,0.432807638929335,0.497992903438899,0,2.59453182862662,0,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0.201799707191048,1.70338495076131,0.343505344755765,0.307240764308458,0.894704431569664,1.66849141711908,0.586164286206121,0.278406173895242,4.92349595790849,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0.358042349351218,2.55786185113436,0.197286811273867,0,0,0,0,0,0,0,0,0.341380344856499,0.762760950878299,0.709163045303809,0.344743373241465,0.291604613383254,0.520874984799877,0,0,0,0,0,0,1.0893846351899,1.11538995422883,0.0769502585037971,0,3.4584585658209,4.8469127981277,0.651884231532048,0,0,0,1.02193298195737,0,0.332423363800313,1.57916962432026,3.33306308340157,3.35643173951685,0.189753732724185,0.635746315921515,0.210998064528027,0,0.424059214301822,0.216388639742091,0.995261931078505,0,0.611030144933625,0.296521128680622,0.247127877893006,0,0.067401132980677,0,0,0.729819156862664,1.17398771359254,0.728341138602278,0.394584402849391,0,0,0.063186579628488,3.90840890477681,0.103688191397247,0.664653872707185,0,0,0,1.70765727617876,0.277349346026277,0,0.391969589657511,0,0.17472666824203,0,0.483781656445426,0.950161122120412,0.246346371159628,0.0969890164884194,3.61850119435151,0.225980740780532,0.137041924646751,0,0.0633107959558787,1.56441106187842,0.160317640503067,0.213452994739353,0,1.29681375438695,0,0.171594997861965,0.14405479798815,0.124252535565433,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.630265458457789,0.164831716762333,0.26961417541674,0.590564889088493,4.9110532598155,0,0.272406812223151,0.321506296930038,0.412618309791701,0,0,0,0.0607495566580247,0,1.73372556058236,1.94081976099493,0.739202355635845,0.179287339332845,0.383830394638891,0,0,2.5426853765475,0,0,0,0,2.21649806023215,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0.106787412567695,0.314408610199332,0,0.992332043623902,0,0,0,0,0,0,0,1.88464915500281,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,1.24513771442608,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,1.56596575179127,0,0,1.71315693154527,0.179088841081487,0,0,0,0.192914038270915,0.337884881306145,2.04993214870357,0,0,0.138258436151731,0.389720617678777,0,0,0.982829546539238,0,0.422624246717254,0,1.70706767510625,1.20550485762571,0,0.184105950251841,1.95831310807222,0,1.79052119825112,0,2.83078695340614,0.655257829152084,0.509197589862076,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0.825788063434183,0,1.03973099535304,0,0,0,0.150420656698515,0,0,2.88097363929565,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0.606965604236632,0.455324382702595,0.177404740325278,0.691403925334676,0,0,0.131545547125698,0,0.222462803784138,0,0,2.5224494698241,0,0,0,0.500335809236594,0.47404083519818,0,2.95559062914385,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0.447421727191169,1.66855397145913,0.365753774946808,0.647428837187895,0.102662806856247,0,0,0.467878926924211,0.397901550322736,0,3.27543637912984,1.31928620094515,1.96251696636676,0,0,0.470317296361523,0,3.06379511232114,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.160482733378337,0,0.917458566809082,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,2.18531143927391,0,0.305966489225945,1.06886962106224,0.551369397209069,4.76344324655513,0.909344378618873,1.07185652062471,0,0.103432995861895,0.213233981900981,0,0.839655827868079,1.61394257169231,1.34558235096736,0.827413057616144,1.41482032270754,0,0,0.740872583160463,0.358611026963382,0,0.325613074443898,2.7749109928206,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.314843125254717,0,0,0,0,0,0,4.8029664359787,1.13735385989937,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,1.30979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0.236613600079688,0,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.68127715990291,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,2.11786274552562,0.459257792658427,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,1.32227932288782,0.960950336825531,0,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.673554789078584,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.534120355637366,4.81239927631679,0.245040215981032,0.185803175125719,0.432807638929335,0.497992903438899,0,2.59453182862662,0,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0.201799707191048,1.70338495076131,0.343505344755765,0.307240764308458,0.894704431569664,1.66849141711908,0.586164286206121,0.278406173895242,4.92349595790849,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0.358042349351218,2.55786185113436,0.197286811273867,0,0,0,0,0,0,0,0,0.341380344856499,0.762760950878299,0.709163045303809,0.344743373241465,0.291604613383254,0.520874984799877,0,0,0,0,0,0,1.0893846351899,1.11538995422883,0.0769502585037971,0,3.4584585658209,4.8469127981277,0.651884231532048,0,0,0,1.02193298195737,0,0.332423363800313,1.57916962432026,3.33306308340157,3.35643173951685,0.189753732724185,0.635746315921515,0.210998064528027,0,0.424059214301822,0.216388639742091,0.995261931078505,0,0.611030144933625,0.296521128680622,0.247127877893006,0,0.067401132980677,0,0,0.729819156862664,1.17398771359254,0.728341138602278,0.394584402849391,0,0,0.063186579628488,3.90840890477681,0.103688191397247,0.664653872707185,0,0,0,1.70765727617876,0.277349346026277,0,0.391969589657511,0,0.17472666824203,0,0.483781656445426,0.950161122120412,0.246346371159628,0.0969890164884194,3.61850119435151,0.225980740780532,0.137041924646751,0,0.0633107959558787,1.56441106187842,0.160317640503067,0.213452994739353,0,1.29681375438695,0,0.171594997861965,0.14405479798815,0.124252535565433,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.630265458457789,0.164831716762333,0.26961417541674,0.590564889088493,4.9110532598155,0,0.272406812223151,0.321506296930038,0.412618309791701,0,0,0,0.0607495566580247,0,1.73372556058236,1.94081976099493,0.739202355635845,0.179287339332845,0.383830394638891,0,0,2.5426853765475,0,0,0,0,2.21649806023215,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0.106787412567695,0.314408610199332,0,0.992332043623902,0,0,0,0,0,0,0,1.88464915500281,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,1.24513771442608,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,1.56596575179127,0,0,1.71315693154527,0.179088841081487,0,0,0,0.192914038270915,0.337884881306145,2.04993214870357,0,0,0.138258436151731,0.389720617678777,0,0,0.982829546539238,0,0.422624246717254,0,1.70706767510625,1.20550485762571,0,0.184105950251841,1.95831310807222,0,1.79052119825112,0,2.83078695340614,0.655257829152084,0.509197589862076,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0.825788063434183,0,1.03973099535304,0,0,0,0.150420656698515,0,0,2.88097363929565,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0.606965604236632,0.455324382702595,0.177404740325278,0.691403925334676,0,0,0.131545547125698,0,0.222462803784138,0,0,2.5224494698241,0,0,0,0.500335809236594,0.47404083519818,0,2.95559062914385,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0,0,0,0.447421727191169,1.66855397145913,0.365753774946808,0.647428837187895,0.102662806856247,0,0,0.467878926924211,0.397901550322736,0,3.27543637912984,1.31928620094515,1.96251696636676,0,0,0.470317296361523,0,3.06379511232114,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.160482733378337,0,0.917458566809082,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0.252332849670158,2.18531143927391,0,0.305966489225945,1.06886962106224,0.551369397209069,4.76344324655513,0.909344378618873,1.07185652062471,0,0.103432995861895,0.213233981900981,0,0.839655827868079,1.61394257169231,1.34558235096736,0.827413057616144,1.41482032270754,0,0,0.740872583160463,0.358611026963382,0,0.325613074443898,2.7749109928206,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p7@LRRC8D | |short_description=p7@LRRC8D | ||
}} | }} |
Latest revision as of 18:13, 19 September 2015
Short description: | p7@LRRC8D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRC8D_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000394593, NM_018103, uc001dnn.2_5end |
EntrezGene: | LRRC8D |
HGNC: | 16992 |
UniProt: | Q7L1W4Q96GG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.01e-07 | 7 |
germ cell | 1.01e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.09e-17 | 235 |
disease of cellular proliferation | 1.96e-16 | 239 |
organ system cancer | 1.58e-12 | 137 |
hematologic cancer | 5.81e-12 | 51 |
immune system cancer | 5.81e-12 | 51 |
chronic leukemia | 9.37e-10 | 8 |
leukemia | 4.52e-09 | 39 |
myeloid leukemia | 1.94e-08 | 31 |
germ cell and embryonal cancer | 2.94e-08 | 22 |
germ cell cancer | 2.94e-08 | 22 |
lung small cell carcinoma | 9.87e-08 | 4 |
hematopoietic system disease | 1.20e-07 | 2 |