FFCP PHASE1:Hg19::chr11:65429891..65429915,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65429891..65429915,-
|short_description=p7@RELA
|description=CAGE_peak_7_at_RELA_5end
|association_with_transcript=0bp_to_ENST00000527874_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5970 | |EntrezGene=5970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |HGNC=9955 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJR1 | |UniProt=E9PJR1 | ||
|association_with_transcript=0bp_to_ENST00000527874_5end | |||
|cluster_id=chr11:65429891..65429915,- | |||
|description=CAGE_peak_7_at_RELA_5end | |||
|id=chr11:65429891..65429915,- | |||
|ontology_enrichment_celltype=CL:0002139!1.82e-27!24;CL:0000071!1.43e-21!18;CL:0002546!1.43e-21!18;CL:0000115!4.16e-19!35;CL:0002078!2.34e-15!44;CL:0000222!1.10e-14!119;CL:0000213!3.23e-14!57;CL:0000215!3.23e-14!57;CL:0002057!2.86e-12!42;CL:1000413!3.13e-12!9;CL:0000860!7.00e-11!45;CL:0002544!1.22e-08!6;CL:0000359!1.49e-08!32;CL:0002543!6.11e-08!6;CL:0005020!1.88e-07!6;CL:0002138!1.88e-07!6;CL:0005022!1.88e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.69e-55;24!CL:0000071;8.70e-46;18!CL:0000115;6.54e-36;36!CL:0000860;1.09e-28;33!CL:0002057;1.09e-28;33!CL:1000413;7.53e-28;9!CL:0002078;1.06e-22;45!CL:0000473;1.43e-19;39!CL:0000234;1.43e-19;39!CL:0002544;5.62e-19;6!CL:0000213;3.40e-15;58!CL:0000215;3.40e-15;58!CL:0000576;7.60e-13;48!CL:0002543;1.68e-12;6!CL:0000359;1.73e-11;32!CL:0002138;1.73e-11;6!CL:0002144;3.95e-09;3!CL:0002545;2.27e-07;2!CL:0000766;3.10e-07;69!CL:0000076;4.27e-07;63!CL:0002594;8.46e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.82e-56,24;CL:0000071,5.37e-46,18;CL:0002546,5.37e-46,18;CL:0000115,3.11e-42,36;CL:0002078,2.00e-32,45;CL:1000413,7.14e-28,9;CL:0000222,1.10e-23,121;CL:0000213,1.17e-23,58;CL:0000215,1.17e-23,58;CL:0000860,1.84e-23,42;CL:0002057,1.84e-23,42;CL:0000473,7.46e-20,48;CL:0000234,7.46e-20,48;CL:0002544,5.31e-19,6;CL:0002194,7.92e-15,59;CL:0000576,7.92e-15,59;CL:0000040,7.92e-15,59;CL:0000559,7.92e-15,59;CL:0000839,2.38e-14,66;CL:0002009,3.50e-14,61;CL:0000557,4.64e-14,67;CL:0000766,9.98e-13,72;CL:0002543,1.27e-12,6;CL:0000359,6.48e-12,32;CL:0005020,1.48e-11,6;CL:0002138,1.48e-11,6;CL:0005022,1.48e-11,6;CL:0000076,6.34e-10,63;CL:0002144,3.53e-09,3;CL:0000192,3.82e-08,43;CL:0000514,3.82e-08,43;CL:0002545,2.21e-07,2;CL:0002321,2.64e-07,250;CL:0000763,7.40e-07,108;CL:0000049,7.40e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002546;8.70e-46;18!CL:0002057;2.41e-18;42!CL:0005022;1.73e-11;6!CL:0000222;2.31e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.37e-30!69;UBERON:0001981!8.82e-27!60;UBERON:0007500!8.82e-27!60;UBERON:0004537!8.82e-27!60;UBERON:0006965!8.82e-27!60;UBERON:0002049!6.87e-25!79;UBERON:0007798!6.87e-25!79;UBERON:0001009!3.60e-24!113;UBERON:0004872!6.92e-24!84;UBERON:0004535!3.08e-22!110;UBERON:0001986!1.43e-21!18;UBERON:0004638!1.43e-21!18;UBERON:0004852!1.43e-21!18;UBERON:0001637!1.72e-20!42;UBERON:0003509!1.72e-20!42;UBERON:0004572!1.72e-20!42;UBERON:0006914!2.94e-18!25;UBERON:0000487!3.00e-18!22;UBERON:0003914!4.49e-18!118;UBERON:0003081!4.88e-17!216;UBERON:0000025!2.40e-15!194;UBERON:0004111!3.54e-14!241;UBERON:0004573!4.99e-14!33;UBERON:0004571!4.99e-14!33;UBERON:0000467!1.79e-12!625;UBERON:0000480!2.25e-12!626;UBERON:0003915!3.13e-12!9;UBERON:0004700!3.13e-12!9;UBERON:0001917!3.13e-12!9;UBERON:0000947!2.44e-11!21;UBERON:0010191!2.44e-11!21;UBERON:0000468!1.37e-10!659;UBERON:0000477!2.09e-10!286;UBERON:0000483!1.15e-08!309;UBERON:0000119!2.36e-08!312;UBERON:0000922!3.68e-08!612;UBERON:0000926!7.29e-08!448;UBERON:0004120!7.29e-08!448;UBERON:0006603!7.29e-08!448;UBERON:0000923!9.17e-08!604;UBERON:0005291!9.17e-08!604;UBERON:0006598!9.17e-08!604;UBERON:0002532!9.17e-08!604;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0007100!1.59e-07!27;UBERON:0002204!5.17e-07!167;UBERON:0000490!6.84e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.70e-46;18!UBERON:0001986;8.70e-46;18!UBERON:0004852;8.70e-46;18!UBERON:0000487;1.34e-36;22!UBERON:0006914;1.22e-31;25!UBERON:0003915;7.53e-28;9!UBERON:0004700;7.53e-28;9!UBERON:0001917;7.53e-28;9!UBERON:0000055;5.69e-24;65!UBERON:0001637;2.43e-23;42!UBERON:0003509;2.43e-23;42!UBERON:0004572;2.43e-23;42!UBERON:0000490;3.19e-21;33!UBERON:0007500;3.75e-21;56!UBERON:0001981;3.75e-21;56!UBERON:0004537;3.75e-21;56!UBERON:0002049;1.97e-18;75!UBERON:0007798;1.97e-18;75!UBERON:0004573;3.39e-18;33!UBERON:0004571;3.39e-18;33!UBERON:0003914;3.07e-15;74!UBERON:0001009;2.65e-10;112!UBERON:0000947;3.06e-10;21!UBERON:0010191;3.06e-10;21!UBERON:0000025;1.80e-09;93!UBERON:0010523;3.95e-09;3!UBERON:0001915;3.95e-09;3!UBERON:0001982;3.95e-09;3!UBERON:0004535;4.44e-09;109!UBERON:0001473;1.54e-08;8!UBERON:0004536;1.54e-08;8!UBERON:0006558;1.54e-08;8!UBERON:0001638;3.32e-08;9!UBERON:0003920;3.32e-08;9!UBERON:0004582;3.32e-08;9!UBERON:0010260;1.99e-07;9!UBERON:0005800;2.27e-07;2!UBERON:0001515;2.27e-07;2!UBERON:0001310;8.46e-07;4!UBERON:0002465;9.10e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.21e-47,68;UBERON:0004638,5.37e-46,18;UBERON:0001986,5.37e-46,18;UBERON:0004852,5.37e-46,18;UBERON:0007500,2.14e-40,59;UBERON:0001981,2.14e-40,59;UBERON:0004537,2.14e-40,59;UBERON:0006965,2.14e-40,59;UBERON:0002049,1.02e-39,78;UBERON:0007798,1.02e-39,78;UBERON:0000487,9.09e-37,22;UBERON:0003081,3.88e-33,203;UBERON:0006914,8.67e-32,25;UBERON:0004872,2.93e-30,83;UBERON:0001009,7.85e-30,112;UBERON:0004535,3.60e-29,109;UBERON:0001637,1.34e-28,42;UBERON:0003509,1.34e-28,42;UBERON:0004572,1.34e-28,42;UBERON:0003915,7.14e-28,9;UBERON:0004700,7.14e-28,9;UBERON:0001917,7.14e-28,9;UBERON:0003914,7.32e-22,117;UBERON:0000926,1.95e-19,315;UBERON:0004120,1.95e-19,315;UBERON:0006603,1.95e-19,315;UBERON:0004573,3.58e-19,33;UBERON:0004571,3.58e-19,33;UBERON:0002405,1.81e-14,93;UBERON:0000025,2.45e-12,192;UBERON:0000490,4.42e-12,148;UBERON:0002371,8.65e-12,76;UBERON:0004111,9.92e-12,240;UBERON:0002193,1.43e-11,108;UBERON:0002204,2.36e-11,167;UBERON:0001474,1.47e-10,82;UBERON:0000947,3.57e-10,21;UBERON:0010191,3.57e-10,21;UBERON:0004765,3.52e-09,90;UBERON:0010523,3.53e-09,3;UBERON:0001915,3.53e-09,3;UBERON:0001982,3.53e-09,3;UBERON:0001473,1.37e-08,8;UBERON:0004536,1.37e-08,8;UBERON:0006558,1.37e-08,8;UBERON:0001638,2.78e-08,9;UBERON:0003920,2.78e-08,9;UBERON:0004582,2.78e-08,9;UBERON:0002390,4.90e-08,98;UBERON:0003061,4.90e-08,98;UBERON:0001434,8.84e-08,100;UBERON:0010260,2.15e-07,9;UBERON:0005800,2.21e-07,2;UBERON:0001515,2.21e-07,2;UBERON:0002465,8.31e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,1.85943229524548,3.28934310417461,1.23882548358041,12.0830804775303,10.246428261164,5.91205574721463,2.06847408441971,2.5819387343353,0,0.376484679085209,0.545812300115692,0,1.83650335422542,1.60464513538047,0,1.31940520074686,2.99195486432448,0.426224750532694,5.22376629531451,2.26954089876456,3.11411124497787,19.597395890026,7.82224377630302,13.031330682307,9.08099253950053,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,6.16163462836786,8.60234595106124,6.2485290289367,12.4367747223282,27.2674633536439,9.62913146790236,8.15080369493561,1.55050055501597,2.84613010149368,1.00416183829401,1.61131726843659,4.56163263431108,1.46437234528902,3.30896772311282,10.5318453224629,1.60739510911344,0.673588117878509,1.68917220724983,9.19899824795299,16.1375162126582,4.76324534219059,0,0,0,0,0.25326102332916,0.397227542439656,0,0,0,2.1349799145941,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.567160915800105,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.352226082707465,2.45422961193825,1.85194205030644,0.951270761172991,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,9.85326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,4.54933536283586,1.87103075804167,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0.2023155617111,0.464845549297286,0.31481234683064,1.3940745403212,4.00443654228915,1.06461206063404,0,2.22389062924704,0,0,0,0,0,0,0,1.56989728039846,0.179872457583315,0,0,2.02182481573316,0,2.52755073743389,0,3.65570234446927,0,0.136499911407986,0,0,0,3.3171948762061,1.31535265576129,0,0,2.02910376962704,1.54911749049875,0.563391205064483,0,0.0982490410131212,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,4.30723814746088,0.199679000498991,0.858452096273142,1.33902874465124,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.316801009558219,0,0,0,1.98627591109629,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,2.06852730178481,0,0,0,2.34932307648928,0,0,0,0,0,0,0,1.5041393641362,2.45076461410769,0,0,0,0.366078794705889,0,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.981542335574726,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.12729431655633,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0.1796504042131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| ||
|short_description=p7@RELA | |||
}} | }} |
Latest revision as of 10:33, 19 September 2015
Short description: | p7@RELA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RELA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527874_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | E9PJR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data