FFCP PHASE1:Hg19::chr11:65319650..65319661,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:65319650..65319661,-
|short_description=p40@LTBP3
|description=CAGE_peak_40_at_LTBP3_5end
|association_with_transcript=-303bp_to_ENST00000529764_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4054 | |EntrezGene=4054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |HGNC=6716 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-303bp_to_ENST00000529764_5end | |||
|cluster_id=chr11:65319650..65319661,- | |||
|description=CAGE_peak_40_at_LTBP3_5end | |||
|id=chr11:65319650..65319661,- | |||
|ontology_enrichment_celltype=CL:0000542!3.44e-17!53;CL:0000051!3.44e-17!53;CL:0000838!5.57e-16!52;CL:0000945!1.68e-11!24;CL:0000826!1.68e-11!24 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.67e-23;1!CL:0000164;3.67e-23;1!CL:0000502;3.67e-23;1!CL:0000172;3.67e-23;1!CL:0000173;3.67e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.10e-23,1;CL:0000164,4.10e-23,1;CL:0000502,4.10e-23,1;CL:0000172,4.10e-23,1;CL:0000173,4.10e-23,1;CL:0002351,4.10e-23,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.67e-23;1 | |||
|ontology_enrichment_disease=DOID:14566!1.10e-14!239;DOID:162!1.62e-14!235;DOID:305!1.14e-12!106;DOID:0060058!7.94e-11!10;DOID:0050687!2.09e-10!143;DOID:3119!3.08e-10!14;DOID:0050686!7.59e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:4430;3.67e-23;1!DOID:4929;2.74e-12;2!DOID:0060058;8.27e-10;10!DOID:3119;2.77e-07;14!DOID:5409;6.68e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.10e-23,1;DOID:4929,2.32e-12,2;DOID:0060058,7.40e-10,10;DOID:3119,2.68e-07,14;DOID:5409,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.54e-09!7;UBERON:0001173!8.54e-09!7;UBERON:0004912!8.54e-09!7;UBERON:0000344!3.89e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.67e-23;1!UBERON:0003703;3.67e-23;1!UBERON:0001174;3.67e-23;1!UBERON:0004914;3.67e-23;1!UBERON:0002108;1.77e-18;4!UBERON:0002370;2.74e-12;2!UBERON:0005058;2.74e-12;2!UBERON:0009113;2.74e-12;2!UBERON:0002114;1.26e-08;2!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.62e-23,1;UBERON:0003703,2.62e-23,1;UBERON:0001174,2.62e-23,1;UBERON:0004914,2.62e-23,1;UBERON:0002108,1.77e-18,4;UBERON:0002114,1.12e-08,2;UBERON:0002370,8.61e-07,4;UBERON:0005058,8.61e-07,4;UBERON:0009113,8.61e-07,4;UBERON:0003295,8.61e-07,4;UBERON:0005562,8.61e-07,4 | |||
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| ||
|short_description=p40@LTBP3 | |||
}} | }} |
Latest revision as of 09:37, 19 September 2015
Short description: | p40@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -303bp_to_ENST00000529764_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.10e-23 | 1 |
enteroendocrine cell | 4.10e-23 | 1 |
type D enteroendocrine cell | 4.10e-23 | 1 |
somatostatin secreting cell | 4.10e-23 | 1 |
pancreatic D cell | 4.10e-23 | 1 |
progenitor cell of endocrine pancreas | 4.10e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.62e-23 | 1 |
extrahepatic bile duct | 2.62e-23 | 1 |
common bile duct | 2.62e-23 | 1 |
duodenal papilla | 2.62e-23 | 1 |
small intestine | 1.77e-18 | 4 |
duodenum | 1.12e-08 | 2 |
thymus | 8.61e-07 | 4 |
hemolymphoid system gland | 8.61e-07 | 4 |
thymic region | 8.61e-07 | 4 |
pharyngeal gland | 8.61e-07 | 4 |
thymus primordium | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.10e-23 | 1 |
tubular adenocarcinoma | 2.32e-12 | 2 |
lymphoma | 7.40e-10 | 10 |
gastrointestinal system cancer | 2.68e-07 | 14 |
lung small cell carcinoma | 6.50e-07 | 4 |