FFCP PHASE1:Hg19::chr11:64622524..64622547,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:64622524..64622547,-
|short_description=p6@EHD1
|description=CAGE_peak_6_at_EHD1_5end
|association_with_transcript=19bp_to_ENST00000488711_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10938 | |EntrezGene=10938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3242 | |HGNC=3242 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000488711_5end | |||
|cluster_id=chr11:64622524..64622547,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_EHD1_5end | |||
|id=chr11:64622524..64622547,- | |||
|ontology_enrichment_celltype=CL:0002057!1.77e-20!42;CL:0000860!2.18e-20!45;CL:0000012!1.91e-18!682;CL:0000548!3.06e-18!679;CL:0000004!3.06e-18!679;CL:0000255!3.06e-18!679;CL:0000003!1.07e-13!722;CL:0000063!7.16e-13!578;CL:0000144!1.83e-11!625;CL:0000066!5.42e-11!254;CL:0002009!1.01e-10!65;CL:0002194!1.12e-10!63;CL:0000576!1.12e-10!63;CL:0000040!1.12e-10!63;CL:0000559!1.12e-10!63;CL:0000766!2.41e-10!76;CL:0000076!8.23e-10!62;CL:0002371!1.42e-09!591;CL:0000839!1.65e-08!70;CL:0000557!1.88e-08!71;CL:0000222!3.06e-08!119;CL:0000220!3.22e-07!246;CL:0002321!6.43e-07!248;CL:0000213!8.81e-07!57;CL:0000215!8.81e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-37;33!CL:0002057;1.54e-37;33!CL:0000473;2.10e-24;39!CL:0000234;2.10e-24;39!CL:0000576;5.76e-21;48!CL:0000766;3.48e-12;69!CL:0000767;7.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.04e-38,42;CL:0002057,3.04e-38,42;CL:0000473,3.55e-32,48;CL:0000234,3.55e-32,48;CL:0002009,4.09e-26,61;CL:0002194,1.66e-25,59;CL:0000576,1.66e-25,59;CL:0000040,1.66e-25,59;CL:0000559,1.66e-25,59;CL:0000766,1.71e-25,72;CL:0000557,6.88e-23,67;CL:0000839,8.75e-22,66;CL:0000763,1.69e-14,108;CL:0000049,1.69e-14,108;CL:0000738,4.33e-11,136;CL:0002087,2.23e-10,115;CL:0002031,1.02e-08,120;CL:0000037,4.10e-07,168;CL:0000767,8.22e-07,3;CL:0000988,9.35e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.62e-10!167;UBERON:0000926!1.28e-09!448;UBERON:0004120!1.28e-09!448;UBERON:0006603!1.28e-09!448;UBERON:0003081!3.85e-09!216;UBERON:0004765!1.13e-08!101;UBERON:0001434!1.13e-08!101;UBERON:0001474!6.44e-08!86;UBERON:0002371!8.00e-08!80;UBERON:0002390!6.80e-07!102;UBERON:0003061!6.80e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-20,76;UBERON:0001474,3.45e-18,82;UBERON:0002390,6.36e-16,98;UBERON:0003061,6.36e-16,98;UBERON:0004765,1.06e-15,90;UBERON:0002405,6.99e-15,93;UBERON:0001434,4.03e-14,100;UBERON:0002193,1.65e-13,108;UBERON:0003081,5.79e-11,203;UBERON:0002204,2.73e-09,167;UBERON:0000926,4.62e-07,315;UBERON:0004120,4.62e-07,315;UBERON:0006603,4.62e-07,315 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.74259811776028,0,0,0,0,0,0.369363174230364,0,0,0,0.821246550437305,0.251085279189606,0,0,0,6.29382842958246,2.30297638858328,5.57338043937874,1.83884244895785,2.409647350226,1.10926203050036,0,0,0,22.1598163412751,24.8675114862976,23.2201631665961,0,0,0,2.61716829803216,0.377875943688809,5.57943340731977,14.6430293250581,6.57868620834921,9.29119112685311,4.60307827715441,5.37937483711111,11.5876292645407,9.3081333798887,14.2006630388442,9.47985406160392,9.03563229804502,6.00393530127261,9.88783331558372,16.5285301880287,8.34415470397843,10.8687311385837,0.659702600373432,1.19678194572979,0.426224750532694,50.7866167600022,30.6388021333215,42.3519129316991,4.77372463987812,5.21482918420201,7.38442071997397,33.9023721474687,32.7767096028933,37.6590241054652,0,0.212604299965044,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0.722878304769133,0,1.15877215168659,0,0,0.0945348171640679,0.886917589850256,0.175669571386252,0,0.364295288292542,0.741568885568859,0,0,0,1.90792499444274,0.571994910780128,0.74291500265913,0.198762407366705,0.860234595106124,1.73570250803797,1.69592382577203,2.51699661725944,0.275118041940067,1.25396979922086,0,0.35576626268671,0,0.805658634218294,0,0.24406205754817,1.10298924103761,2.43042584364528,0.0892997282840798,0.22452937262617,0,0,2.84779697870439,0.549605231791222,1.31780417436063,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.624320153660641,1.1409436430889,1.49448680551801,0,0.161872944368132,0.421352420106746,0.816616685019573,1.35117749042945,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.673344455816265,0.625592599359821,0.277064115484183,0,0.919463387397059,0,0.453728732640084,0.179389635688862,0.213557388818567,0,1.50045548042201,0.309157587715317,0,0.37223371266318,0,0.389748020644795,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.339121184620975,0.966304265816484,1.09098448236334,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0.196221465125346,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.329250856225877,1.1240175325762,1.3068766413512,0.648119116109707,0.325808305310325,0,1.44331342025273,0.231860809950154,0,0.144366447761074,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0,0.850650583454319,0.179117045405697,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,1.0267360014933,0.258543431515556,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.799266537048298,0,0,0,0.65147236858747,0,0,1.20575750823834,0.871533458600294,1.19967589418468,0,0,0,0.479249710983165,0,0,0.434343920002738,0.821905290201534,0.716243852959582,0,0.788123040807709,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.35142424497814,0,2.27407504055985,2.0694614258501,0.664225598535437,0.553107505625109,0.347534457872331,0,0.343143423810856,0.413536052245775,4.96142661882819,5.22965033236877,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0.492762936082855,1.03850885836724,0.697262270759755,0.604297247958111,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0,0.451199612907412,0.231046011313244,1.56869953835371,1.46139224653261,0.316654886678627,0,0.340187410553031,1.29549549661284,0,0.270946437543853,1.00337954770971,0.509752546090077,0.831076008928724,1.56712328305525,0,0.261435451024901,0.512900250232778,0,0,0,0.366277859273374,0.577566499444116,0,1.95018073810956,0,0.386682873168488,0.308097234229289,0,0,0,0.145016693914229,0.340906509664404,0.267096106940212,0,0.192190067365106,0.382838137483752,0,0,0,0,0.924100740528266,1.59691809095107,1.73986598415015,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0.95460974377781,0,0,0,0.235624804691373,0.606547444719948,0,0,0.48763373908959,0.487426979262569,0,0.272999822815972,0.141405431953713,1.13008116620243,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0,1.21746226177622,0.30982349809975,0.845086807596724,0.143411352204052,0.196498082026242,0.7133421029625,0.354761064070598,1.26664581178598,0.658589785919804,1.13841952129715,0,0.673554789078584,0,0,0.188287601553558,1.29151611801369,0,0.443430153536676,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,2.24991101504741,0,0,1.07842021376792,0.5370635240268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| ||
|short_description=p6@EHD1 | |||
}} | }} |
Latest revision as of 04:53, 19 September 2015
Short description: | p6@EHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EHD1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 19bp_to_ENST00000488711_5end |
EntrezGene: | EHD1 |
HGNC: | 3242 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.04e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.04e-38 | 42 |
defensive cell | 3.55e-32 | 48 |
phagocyte | 3.55e-32 | 48 |
macrophage dendritic cell progenitor | 4.09e-26 | 61 |
monopoietic cell | 1.66e-25 | 59 |
monocyte | 1.66e-25 | 59 |
monoblast | 1.66e-25 | 59 |
promonocyte | 1.66e-25 | 59 |
myeloid leukocyte | 1.71e-25 | 72 |
granulocyte monocyte progenitor cell | 6.88e-23 | 67 |
myeloid lineage restricted progenitor cell | 8.75e-22 | 66 |
myeloid cell | 1.69e-14 | 108 |
common myeloid progenitor | 1.69e-14 | 108 |
leukocyte | 4.33e-11 | 136 |
nongranular leukocyte | 2.23e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-08 | 120 |
hematopoietic stem cell | 4.10e-07 | 168 |
basophil | 8.22e-07 | 3 |
hematopoietic cell | 9.35e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-20 | 76 |
bone element | 3.45e-18 | 82 |
hematopoietic system | 6.36e-16 | 98 |
blood island | 6.36e-16 | 98 |
skeletal element | 1.06e-15 | 90 |
immune system | 6.99e-15 | 93 |
skeletal system | 4.03e-14 | 100 |
hemolymphoid system | 1.65e-13 | 108 |
lateral plate mesoderm | 5.79e-11 | 203 |
musculoskeletal system | 2.73e-09 | 167 |
mesoderm | 4.62e-07 | 315 |
mesoderm-derived structure | 4.62e-07 | 315 |
presumptive mesoderm | 4.62e-07 | 315 |