FFCP PHASE1:Hg19::chr16:2521599..2521611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4917 | |EntrezGene=4917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8030 | |HGNC=8030 | ||
|TSSclassifier=strong | |||
|UniProt=O00634 | |UniProt=O00634 | ||
|association_with_transcript=99bp_to_ENST00000293973,NM_006181,uc002cqj.2_5end | |association_with_transcript=99bp_to_ENST00000293973,NM_006181,uc002cqj.2_5end | ||
|cluster_id=chr16:2521599..2521611,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_7_at_NTN3_5end | |description=CAGE_peak_7_at_NTN3_5end | ||
|id=chr16:2521599..2521611,+ | |id=chr16:2521599..2521611,+ | ||
|ontology_enrichment_celltype=CL:0000242!2.65e-10!2;CL:0002575!5.42e-10!2;CL:0000240!3.73e-07!6;CL:0000311!3.73e-07!6;CL:0000079!3.73e-07!6;CL:0000237!3.73e-07!6;CL:0000036!3.73e-07!6;CL:0000357!3.73e-07!6;CL:0000114!3.73e-07!6 | |ontology_enrichment_celltype=CL:0000242!2.65e-10!2;CL:0002575!5.42e-10!2;CL:0000240!3.73e-07!6;CL:0000311!3.73e-07!6;CL:0000079!3.73e-07!6;CL:0000237!3.73e-07!6;CL:0000036!3.73e-07!6;CL:0000357!3.73e-07!6;CL:0000114!3.73e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2!CL:0000123;9.18e-26;2!CL:0000242;9.18e-26;2!CL:0000312;3.60e-11;5!CL:0000240;1.57e-09;6!CL:0000311;1.57e-09;6!CL:0000079;1.57e-09;6!CL:0000237;1.57e-09;6!CL:0000362;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2;CL:0000242,9.18e-26,2;CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.10e-50;1!CL:0000357;1.57e-09;6!CL:0000114;1.57e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6 | |||
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| ||
|short_description=p7@NTN3 | |short_description=p7@NTN3 | ||
}} | }} |
Latest revision as of 19:48, 15 September 2015
Short description: | p7@NTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NTN3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 99bp_to_ENST00000293973, NM_006181, uc002cqj.2_5end |
EntrezGene: | NTN3 |
HGNC: | 8030 |
UniProt: | O00634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
Merkel cell | 9.18e-26 | 2 |
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |