FFCP PHASE1:Hg19::chr16:215965..215984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3042 | |EntrezGene=3042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4826 | |HGNC=4826 | ||
|TSSclassifier=strong | |||
|UniProt=Q6B0K9 | |UniProt=Q6B0K9 | ||
|association_with_transcript=0bp_to_ENST00000356815,NM_001003938,uc002cfu.1_5end | |association_with_transcript=0bp_to_ENST00000356815,NM_001003938,uc002cfu.1_5end | ||
|cluster_id=chr16:215965..215984,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_HBM_5end | |description=CAGE_peak_1_at_HBM_5end | ||
|id=chr16:215965..215984,+ | |id=chr16:215965..215984,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000226;6.19e-08;3!CL:0000842;6.19e-08;3!CL:0000764;2.33e-07;2!CL:0000558;2.33e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,5.89e-08,3;CL:0000842,5.89e-08,3;CL:0000764,2.33e-07,2;CL:0000765,2.33e-07,2;CL:0000050,2.33e-07,2;CL:0000038,2.33e-07,2;CL:0000558,2.33e-07,2;CL:0000547,2.33e-07,2;CL:0000549,2.33e-07,2;CL:0000550,2.33e-07,2;CL:0000552,2.33e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.03e-13;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-55!115;UBERON:0001049!4.34e-16!57;UBERON:0005068!4.34e-16!57;UBERON:0006241!4.34e-16!57;UBERON:0007135!4.34e-16!57;UBERON:0000178!5.61e-13!15;UBERON:0000179!5.61e-13!15;UBERON:0000463!5.61e-13!15;UBERON:0003080!9.76e-13!42;UBERON:0003075!3.59e-12!86;UBERON:0007284!3.59e-12!86;UBERON:0002780!5.12e-12!41;UBERON:0001890!5.12e-12!41;UBERON:0006240!5.12e-12!41;UBERON:0002616!5.50e-12!59;UBERON:0001017!5.65e-12!82;UBERON:0005743!8.44e-12!86;UBERON:0000955!2.31e-11!69;UBERON:0006238!2.31e-11!69;UBERON:0002346!3.88e-11!90;UBERON:0001950!7.65e-10!20;UBERON:0001893!1.08e-09!34;UBERON:0000073!1.11e-09!94;UBERON:0001016!1.11e-09!94;UBERON:0002020!1.14e-09!34;UBERON:0003528!1.14e-09!34;UBERON:0002791!3.50e-09!33;UBERON:0002619!1.23e-08!22;UBERON:0001869!2.92e-08!32;UBERON:0003056!1.98e-07!61;UBERON:0002390!2.11e-07!102;UBERON:0003061!2.11e-07!102;UBERON:0000956!3.44e-07!25;UBERON:0000203!3.44e-07!25;UBERON:0002193!6.04e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-25;15!UBERON:0000179;1.90e-25;15!UBERON:0000463;1.90e-25;15!UBERON:0000922;7.24e-21;49!UBERON:0002390;2.13e-19;32!UBERON:0002193;5.75e-10;42!UBERON:0004177;6.60e-09;5!UBERON:0005057;6.60e-09;5!UBERON:0000341;7.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.82e-25,15;UBERON:0000179,1.82e-25,15;UBERON:0000463,1.82e-25,15;UBERON:0007023,3.70e-17,114;UBERON:0000341,7.05e-07,2 | |||
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| ||
|short_description=p1@HBM | |short_description=p1@HBM | ||
}} | }} |
Latest revision as of 04:08, 25 September 2015
Short description: | p1@HBM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HBM_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000356815, NM_001003938, uc002cfu.1_5end |
EntrezGene: | HBM |
HGNC: | 4826 |
UniProt: | Q6B0K9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 5.89e-08 | 3 |
mononuclear cell | 5.89e-08 | 3 |
erythroid lineage cell | 2.33e-07 | 2 |
erythroblast | 2.33e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.33e-07 | 2 |
erythroid progenitor cell | 2.33e-07 | 2 |
reticulocyte | 2.33e-07 | 2 |
proerythroblast | 2.33e-07 | 2 |
basophilic erythroblast | 2.33e-07 | 2 |
polychromatophilic erythroblast | 2.33e-07 | 2 |
orthochromatic erythroblast | 2.33e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.82e-25 | 15 |
haemolymphatic fluid | 1.82e-25 | 15 |
organism substance | 1.82e-25 | 15 |
adult organism | 3.70e-17 | 114 |
throat | 7.05e-07 | 2 |