FFCP PHASE1:Hg19::chr16:20548514..20548523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348158 | |EntrezGene=348158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30931 | |HGNC=30931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_BC026010_5end | |association_with_transcript=-10bp_to_BC026010_5end | ||
|cluster_id=chr16:20548514..20548523,- | |||
|coexpression_cluster_id=C1294 | |||
|description=CAGE_peak_3_at_ACSM2B_5end | |description=CAGE_peak_3_at_ACSM2B_5end | ||
|id=chr16:20548514..20548523,- | |id=chr16:20548514..20548523,- | ||
|ontology_enrichment_celltype=CL:0000181!2.70e-45!12;CL:0000417!2.70e-45!12;CL:0000668!2.70e-45!12;CL:0000414!2.70e-45!12;CL:0000412!2.70e-45!12;CL:0000182!2.70e-45!12;CL:0000223!4.36e-09!59 | |ontology_enrichment_celltype=CL:0000181!2.70e-45!12;CL:0000417!2.70e-45!12;CL:0000668!2.70e-45!12;CL:0000414!2.70e-45!12;CL:0000412!2.70e-45!12;CL:0000182!2.70e-45!12;CL:0000223!4.36e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.45e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-30,12;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.76e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.81e-39!19;UBERON:0006925!9.81e-39!19;UBERON:0008836!9.81e-39!19;UBERON:0008835!2.02e-33!22;UBERON:0003894!2.02e-33!22;UBERON:0009854!5.87e-32!23;UBERON:0007499!2.22e-29!25;UBERON:0009497!2.22e-29!25;UBERON:0000015!2.22e-29!25;UBERON:0002423!2.22e-29!25;UBERON:0006235!2.22e-29!25;UBERON:0004161!2.22e-29!25;UBERON:0005057!3.06e-28!26;UBERON:0009856!3.06e-28!26;UBERON:0002365!1.23e-23!31;UBERON:0002330!1.23e-23!31;UBERON:0005172!1.04e-21!55;UBERON:0005173!1.04e-21!55;UBERON:0002368!6.72e-21!35;UBERON:0002417!1.67e-19!61;UBERON:0000916!1.67e-19!61;UBERON:0000949!3.57e-16!45;UBERON:0003929!2.07e-13!54;UBERON:0002530!3.08e-12!59;UBERON:0005177!8.75e-11!107;UBERON:0009569!3.63e-10!113;UBERON:0005911!1.13e-08!82;UBERON:0002405!9.26e-08!115;UBERON:0001041!3.59e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-19;19!UBERON:0006925;1.58e-19;19!UBERON:0002423;4.61e-15;25!UBERON:0002365;1.07e-12;31!UBERON:0002330;1.07e-12;31!UBERON:0002368;4.71e-12;33!UBERON:0005172;1.89e-11;52!UBERON:0005173;1.89e-11;52!UBERON:0000949;1.36e-09;43!UBERON:0002417;8.23e-08;58!UBERON:0000916;8.23e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-19,19;UBERON:0006925,1.58e-19,19;UBERON:0008836,1.58e-19,19;UBERON:0008835,5.41e-17,22;UBERON:0003894,5.41e-17,22;UBERON:0009854,2.71e-16,23;UBERON:0007499,4.61e-15,25;UBERON:0009497,4.61e-15,25;UBERON:0000015,4.61e-15,25;UBERON:0002423,4.61e-15,25;UBERON:0006235,4.61e-15,25;UBERON:0004161,4.61e-15,25;UBERON:0009856,1.62e-14,26;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002365,2.58e-12,31;UBERON:0002330,2.58e-12,31;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0003929,2.12e-07,54;UBERON:0005177,6.11e-07,101;UBERON:0002530,7.84e-07,59 | |||
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|short_description=p3@ACSM2B | |short_description=p3@ACSM2B | ||
}} | }} |
Latest revision as of 02:17, 25 September 2015
Short description: | p3@ACSM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACSM2B_5end |
Coexpression cluster: | C1294_Hepatocyte_kidney_liver_seminal_salivary_ductus_thyroid |
Association with transcript: | -10bp_to_BC026010_5end |
EntrezGene: | ACSM2B |
HGNC: | 30931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.45e-30 | 12 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.58e-19 | 19 |
digestive gland | 1.58e-19 | 19 |
liver bud | 1.58e-19 | 19 |
hepatic diverticulum | 5.41e-17 | 22 |
liver primordium | 5.41e-17 | 22 |
digestive tract diverticulum | 2.71e-16 | 23 |
epithelial sac | 4.61e-15 | 25 |
epithelium of foregut-midgut junction | 4.61e-15 | 25 |
anatomical boundary | 4.61e-15 | 25 |
hepatobiliary system | 4.61e-15 | 25 |
foregut-midgut junction | 4.61e-15 | 25 |
septum transversum | 4.61e-15 | 25 |
sac | 1.62e-14 | 26 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
exocrine gland | 2.58e-12 | 31 |
exocrine system | 2.58e-12 | 31 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
endocrine gland | 5.30e-11 | 35 |
endocrine system | 9.88e-09 | 45 |
gut epithelium | 2.12e-07 | 54 |
trunk region element | 6.11e-07 | 101 |
gland | 7.84e-07 | 59 |