FFCP PHASE1:Hg19::chr16:19429245..19429253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79838 | |EntrezGene=79838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |HGNC=22999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=227bp_to_ENST00000542583,uc010var.1_5end | |association_with_transcript=227bp_to_ENST00000542583,uc010var.1_5end | ||
|cluster_id=chr16:19429245..19429253,+ | |||
|coexpression_cluster_id=C2361 | |||
|description=CAGE_peak_9_at_TMC5_5end | |description=CAGE_peak_9_at_TMC5_5end | ||
|id=chr16:19429245..19429253,+ | |id=chr16:19429245..19429253,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.44e-16;1!CL:0000164;6.44e-16;1!CL:0000502;6.44e-16;1!CL:0000172;6.44e-16;1!CL:0000173;6.44e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.44e-16,1;CL:0000164,6.44e-16,1;CL:0000502,6.44e-16,1;CL:0000172,6.44e-16,1;CL:0000173,6.44e-16,1;CL:0002351,6.44e-16,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.44e-16;1 | |||
|ontology_enrichment_disease=DOID:3493!1.74e-09!2 | |ontology_enrichment_disease=DOID:3493!1.74e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.94e-29;2!DOID:4430;6.44e-16;1!DOID:3111;2.75e-15;1!DOID:3603;2.75e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.94e-29,2;DOID:4430,6.44e-16,1;DOID:3111,3.17e-15,1;DOID:3603,3.17e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.39e-10!129;UBERON:0004185!1.39e-10!129;UBERON:0004119!1.93e-09!169;UBERON:0000925!1.93e-09!169;UBERON:0006595!1.93e-09!169;UBERON:0002394!3.34e-09!4;UBERON:0003928!3.34e-09!4;UBERON:0003127!3.92e-09!2;UBERON:0002294!4.56e-09!7;UBERON:0001173!4.56e-09!7;UBERON:0004912!4.56e-09!7;UBERON:0000341!5.85e-09!2;UBERON:0001007!7.08e-09!155;UBERON:0001555!7.08e-09!155;UBERON:0007026!7.08e-09!155;UBERON:0007023!9.30e-09!115 | |ontology_enrichment_uberon=UBERON:0004921!1.39e-10!129;UBERON:0004185!1.39e-10!129;UBERON:0004119!1.93e-09!169;UBERON:0000925!1.93e-09!169;UBERON:0006595!1.93e-09!169;UBERON:0002394!3.34e-09!4;UBERON:0003928!3.34e-09!4;UBERON:0003127!3.92e-09!2;UBERON:0002294!4.56e-09!7;UBERON:0001173!4.56e-09!7;UBERON:0004912!4.56e-09!7;UBERON:0000341!5.85e-09!2;UBERON:0001007!7.08e-09!155;UBERON:0001555!7.08e-09!155;UBERON:0007026!7.08e-09!155;UBERON:0007023!9.30e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.07e-26;4!UBERON:0005409;1.53e-15;22!UBERON:0000160;4.36e-13;17!UBERON:0004921;3.34e-09;33!UBERON:0003127;1.73e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.16e-26,4;UBERON:0005409,9.44e-14,25;UBERON:0000160,4.50e-13,17;UBERON:0004921,8.43e-09,118;UBERON:0003127,1.61e-08,2;UBERON:0001007,5.41e-07,145;UBERON:0001555,5.41e-07,145;UBERON:0007026,5.41e-07,145 | |||
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| ||
|short_description=p9@TMC5 | |short_description=p9@TMC5 | ||
}} | }} |
Latest revision as of 23:51, 24 September 2015
Short description: | p9@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMC5_5end |
Coexpression cluster: | C2361_small_somatostatinoma_colon_signet_trachea_lung_temporal |
Association with transcript: | 227bp_to_ENST00000542583, uc010var.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.44e-16 | 1 |
enteroendocrine cell | 6.44e-16 | 1 |
type D enteroendocrine cell | 6.44e-16 | 1 |
somatostatin secreting cell | 6.44e-16 | 1 |
pancreatic D cell | 6.44e-16 | 1 |
progenitor cell of endocrine pancreas | 6.44e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.16e-26 | 4 |
gastrointestinal system | 9.44e-14 | 25 |
intestine | 4.50e-13 | 17 |
subdivision of digestive tract | 8.43e-09 | 118 |
open tracheal system trachea | 1.61e-08 | 2 |
digestive system | 5.41e-07 | 145 |
digestive tract | 5.41e-07 | 145 |
primitive gut | 5.41e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.94e-29 | 2 |
somatostatinoma | 6.44e-16 | 1 |
cystadenocarcinoma | 3.17e-15 | 1 |
mucinous cystadenocarcinoma | 3.17e-15 | 1 |