FFCP PHASE1:Hg19::chr1:26126670..26126721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15999 | |HGNC=15999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000374315_5end | |association_with_transcript=0bp_to_ENST00000374315_5end | ||
|cluster_id=chr1:26126670..26126721,+ | |||
|coexpression_cluster_id=C3282 | |||
|description=CAGE_peak_1_at_SEPN1_5end | |description=CAGE_peak_1_at_SEPN1_5end | ||
|id=chr1:26126670..26126721,+ | |id=chr1:26126670..26126721,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.66e-27!180;CL:0000222!2.45e-23!119;CL:0002321!2.54e-21!248;CL:0000220!3.50e-21!246;CL:0002078!3.75e-17!44;CL:0000115!4.43e-17!35;CL:0002139!4.84e-15!24;CL:0000183!5.31e-14!59;CL:0000071!5.00e-12!18;CL:0002546!5.00e-12!18;CL:0000680!1.04e-11!57;CL:0000056!1.04e-11!57;CL:0000355!1.04e-11!57;CL:0000393!1.16e-11!60;CL:0000211!1.16e-11!60;CL:0000187!1.77e-11!54;CL:0000213!2.04e-11!57;CL:0000215!2.04e-11!57;CL:0000057!3.52e-10!75;CL:0000192!5.20e-09!42;CL:0000514!5.20e-09!42;CL:1000449!3.30e-07!16;CL:0000359!3.89e-07!32;CL:1000413!9.05e-07!9 | |ontology_enrichment_celltype=CL:0000055!5.66e-27!180;CL:0000222!2.45e-23!119;CL:0002321!2.54e-21!248;CL:0000220!3.50e-21!246;CL:0002078!3.75e-17!44;CL:0000115!4.43e-17!35;CL:0002139!4.84e-15!24;CL:0000183!5.31e-14!59;CL:0000071!5.00e-12!18;CL:0002546!5.00e-12!18;CL:0000680!1.04e-11!57;CL:0000056!1.04e-11!57;CL:0000355!1.04e-11!57;CL:0000393!1.16e-11!60;CL:0000211!1.16e-11!60;CL:0000187!1.77e-11!54;CL:0000213!2.04e-11!57;CL:0000215!2.04e-11!57;CL:0000057!3.52e-10!75;CL:0000192!5.20e-09!42;CL:0000514!5.20e-09!42;CL:1000449!3.30e-07!16;CL:0000359!3.89e-07!32;CL:1000413!9.05e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.86e-15;24!CL:0000115;9.34e-15;36!CL:0000071;4.98e-12;18!CL:0002078;7.67e-12;45!CL:0000213;1.63e-07;58!CL:0000215;1.63e-07;58!CL:0000192;4.70e-07;43!CL:1000449;6.25e-07;15!CL:0000359;6.56e-07;32!CL:0000187;8.67e-07;55!CL:1000413;9.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.34e-24,121;CL:0002321,4.49e-22,250;CL:0002078,9.70e-18,45;CL:0000115,1.11e-17,36;CL:0002139,4.84e-15,24;CL:0000071,5.00e-12,18;CL:0002546,5.00e-12,18;CL:0000680,5.31e-12,58;CL:0000056,5.31e-12,58;CL:0000355,5.31e-12,58;CL:0000393,5.92e-12,61;CL:0000211,5.92e-12,61;CL:0000213,6.59e-12,58;CL:0000215,6.59e-12,58;CL:0000187,8.99e-12,55;CL:0000057,1.52e-10,76;CL:0000192,2.69e-09,43;CL:0000514,2.69e-09,43;CL:0000359,3.89e-07,32;CL:1000449,6.43e-07,15;CL:1000413,9.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.98e-12;18!CL:0000222;1.39e-07;121!CL:0000514;4.70e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.47e-24!79;UBERON:0007798!5.47e-24!79;UBERON:0000119!7.49e-23!312;UBERON:0000483!9.34e-22!309;UBERON:0000468!3.44e-20!659;UBERON:0000055!1.24e-19!69;UBERON:0004872!1.77e-18!84;UBERON:0003914!3.46e-18!118;UBERON:0001009!8.04e-18!113;UBERON:0000467!1.06e-17!625;UBERON:0000480!2.87e-17!626;UBERON:0004535!2.99e-17!110;UBERON:0000475!8.46e-17!365;UBERON:0001981!1.41e-16!60;UBERON:0007500!1.41e-16!60;UBERON:0004537!1.41e-16!60;UBERON:0006965!1.41e-16!60;UBERON:0004111!4.40e-15!241;UBERON:0000477!5.32e-15!286;UBERON:0005256!5.47e-14!143;UBERON:0000922!5.84e-14!612;UBERON:0000481!7.65e-14!347;UBERON:0000486!2.72e-13!82;UBERON:0000490!2.80e-13!138;UBERON:0002050!4.65e-13!605;UBERON:0005423!4.65e-13!605;UBERON:0000914!4.77e-13!83;UBERON:0002329!4.77e-13!83;UBERON:0003077!4.77e-13!83;UBERON:0003059!4.77e-13!83;UBERON:0007282!4.77e-13!83;UBERON:0009618!4.77e-13!83;UBERON:0007285!4.77e-13!83;UBERON:0000923!8.05e-13!604;UBERON:0005291!8.05e-13!604;UBERON:0006598!8.05e-13!604;UBERON:0002532!8.05e-13!604;UBERON:0004290!8.19e-13!70;UBERON:0000025!8.86e-13!194;UBERON:0001986!5.00e-12!18;UBERON:0004638!5.00e-12!18;UBERON:0004852!5.00e-12!18;UBERON:0002100!7.40e-12!216;UBERON:0006914!7.55e-12!25;UBERON:0000487!1.21e-11!22;UBERON:0001134!1.45e-11!61;UBERON:0002036!1.45e-11!61;UBERON:0003082!1.45e-11!61;UBERON:0002385!4.24e-11!63;UBERON:0001015!4.24e-11!63;UBERON:0000383!4.24e-11!63;UBERON:0001637!1.99e-10!42;UBERON:0003509!1.99e-10!42;UBERON:0004572!1.99e-10!42;UBERON:0003103!4.58e-10!69;UBERON:0004573!4.95e-08!33;UBERON:0004571!4.95e-08!33;UBERON:0003104!7.36e-08!238;UBERON:0009142!7.36e-08!238;UBERON:0004211!3.30e-07!16;UBERON:0001285!3.30e-07!16;UBERON:0007684!3.30e-07!16;UBERON:0003220!3.30e-07!16;UBERON:0004208!3.30e-07!16;UBERON:0000353!4.42e-07!17;UBERON:0000080!7.31e-07!18;UBERON:0002120!7.31e-07!18;UBERON:0004875!7.31e-07!18;UBERON:0005721!7.31e-07!18;UBERON:0005754!7.31e-07!18;UBERON:0007297!7.31e-07!18;UBERON:0006555!8.42e-07!17;UBERON:0005103!8.42e-07!17;UBERON:0000083!8.42e-07!17;UBERON:0009201!8.42e-07!17;UBERON:0004819!8.42e-07!17;UBERON:0006553!8.42e-07!17;UBERON:0003074!8.42e-07!17;UBERON:0003060!8.42e-07!17;UBERON:0003915!9.05e-07!9;UBERON:0004700!9.05e-07!9;UBERON:0001917!9.05e-07!9;UBERON:0004876!9.93e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.98e-12;18!UBERON:0001986;4.98e-12;18!UBERON:0004852;4.98e-12;18!UBERON:0006914;7.67e-12;25!UBERON:0000487;1.23e-11;22!UBERON:0003914;1.79e-10;74!UBERON:0000055;2.46e-10;65!UBERON:0000490;2.95e-10;33!UBERON:0002049;5.79e-10;75!UBERON:0007798;5.79e-10;75!UBERON:0007500;2.26e-09;56!UBERON:0001981;2.26e-09;56!UBERON:0004537;2.26e-09;56!UBERON:0001637;3.52e-08;42!UBERON:0003509;3.52e-08;42!UBERON:0004572;3.52e-08;42!UBERON:0004573;1.06e-07;33!UBERON:0004571;1.06e-07;33!UBERON:0006555;6.25e-07;15!UBERON:0004819;6.25e-07;15!UBERON:0001285;6.25e-07;15!UBERON:0007684;6.25e-07;15!UBERON:0003915;9.02e-07;9!UBERON:0004700;9.02e-07;9!UBERON:0001917;9.02e-07;9 | |||
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| ||
|short_description=p1@SEPN1 | |short_description=p1@SEPN1 | ||
}} | }} |
Latest revision as of 03:49, 17 September 2015
Short description: | p1@SEPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPN1_5end |
Coexpression cluster: | C3282_Mesenchymal_Renal_Endothelial_Hepatic_Fibroblast_Pericytes_Trabecular |
Association with transcript: | 0bp_to_ENST00000374315_5end |
EntrezGene: | NA |
HGNC: | 15999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.34e-24 | 121 |
embryonic cell | 4.49e-22 | 250 |
meso-epithelial cell | 9.70e-18 | 45 |
endothelial cell | 1.11e-17 | 36 |
endothelial cell of vascular tree | 4.84e-15 | 24 |
blood vessel endothelial cell | 5.00e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.00e-12 | 18 |
muscle precursor cell | 5.31e-12 | 58 |
myoblast | 5.31e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.31e-12 | 58 |
electrically responsive cell | 5.92e-12 | 61 |
electrically active cell | 5.92e-12 | 61 |
lining cell | 6.59e-12 | 58 |
barrier cell | 6.59e-12 | 58 |
muscle cell | 8.99e-12 | 55 |
fibroblast | 1.52e-10 | 76 |
smooth muscle cell | 2.69e-09 | 43 |
smooth muscle myoblast | 2.69e-09 | 43 |
vascular associated smooth muscle cell | 3.89e-07 | 32 |
epithelial cell of nephron | 6.43e-07 | 15 |
endothelial cell of artery | 9.05e-07 | 9 |