FFCP PHASE1:Hg19::chr1:218616018..218616033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_AK021874_5end | |association_with_transcript=50bp_to_AK021874_5end | ||
|cluster_id=chr1:218616018..218616033,+ | |||
|description=CAGE_peak_19_at_TGFB2_5end | |description=CAGE_peak_19_at_TGFB2_5end | ||
|id=chr1:218616018..218616033,+ | |id=chr1:218616018..218616033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.92e-24;3!CL:0000067;1.92e-24;3!CL:0005012;1.92e-24;3!CL:0002304;1.92e-24;3!CL:0000306;1.03e-08;4!CL:0002222;1.03e-08;4!CL:0002224;1.03e-08;4!CL:0000075;4.00e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.34e-24,3;CL:0000067,3.34e-24,3;CL:0005012,3.34e-24,3;CL:0002304,3.34e-24,3;CL:0000306,9.20e-09,4;CL:0002222,9.20e-09,4;CL:0002224,9.20e-09,4;CL:0000075,4.23e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;2.60e-09;1!DOID:3112;6.21e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.82e-09,1;DOID:3112,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.25e-12!312;UBERON:0000483!4.28e-12!309;UBERON:0000477!2.17e-10!286;UBERON:0004111!4.15e-09!241;UBERON:0000033!7.29e-09!123;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000481!1.34e-08!347;UBERON:0000153!1.62e-08!129;UBERON:0007811!1.62e-08!129;UBERON:0002346!2.01e-08!90;UBERON:0000475!2.35e-08!365;UBERON:0000025!5.75e-08!194;UBERON:0003056!6.92e-08!61;UBERON:0007625!2.39e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.92e-24;3!UBERON:0001775;1.92e-24;3!UBERON:0000488;1.72e-18;4!UBERON:0007625;9.23e-18;11!UBERON:0001801;6.32e-14;14!UBERON:0000970;1.30e-13;20!UBERON:0002104;6.11e-13;21!UBERON:0002203;1.63e-12;6!UBERON:0001768;1.63e-12;6!UBERON:0002200;1.63e-12;6!UBERON:0000020;8.99e-12;23!UBERON:0006876;1.22e-11;11!UBERON:0001032;2.92e-11;24!UBERON:0004456;2.92e-11;24!UBERON:0002294;7.53e-11;7!UBERON:0001173;7.53e-11;7!UBERON:0000019;3.25e-10;19!UBERON:0000047;3.25e-10;19!UBERON:0004088;3.25e-10;19!UBERON:0010230;3.25e-10;19!UBERON:0001282;2.60e-09;1!UBERON:0004913;2.60e-09;1!UBERON:0009842;2.60e-09;1!UBERON:0003703;2.60e-09;1!UBERON:0003704;2.60e-09;1!UBERON:0001171;2.60e-09;1!UBERON:0001172;2.60e-09;1!UBERON:0001174;2.60e-09;1!UBERON:0004914;2.60e-09;1!UBERON:0001456;3.19e-09;21!UBERON:0007029;6.21e-09;1!UBERON:0002394;6.73e-09;4!UBERON:0003928;6.73e-09;4!UBERON:0010077;1.03e-08;4!UBERON:0005389;1.03e-08;4!UBERON:0000484;1.03e-08;4!UBERON:0000965;1.03e-08;4!UBERON:0001803;1.03e-08;4!UBERON:0010371;2.14e-08;31!UBERON:0000058;9.84e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.34e-24,3;UBERON:0001775,3.34e-24,3;UBERON:0000488,2.61e-18,4;UBERON:0007625,1.06e-17,11;UBERON:0001801,7.06e-14,14;UBERON:0000970,5.74e-13,21;UBERON:0002104,5.74e-13,21;UBERON:0002203,2.14e-12,6;UBERON:0001768,2.14e-12,6;UBERON:0002200,2.14e-12,6;UBERON:0006876,1.36e-11,11;UBERON:0000020,2.76e-11,24;UBERON:0001032,2.76e-11,24;UBERON:0004456,2.76e-11,24;UBERON:0000019,1.16e-09,20;UBERON:0000047,1.16e-09,20;UBERON:0010312,1.16e-09,20;UBERON:0004088,1.16e-09,20;UBERON:0010230,1.16e-09,20;UBERON:0003072,1.16e-09,20;UBERON:0004128,1.16e-09,20;UBERON:0003071,1.16e-09,20;UBERON:0001282,2.40e-09,1;UBERON:0009842,2.40e-09,1;UBERON:0003704,2.40e-09,1;UBERON:0001171,2.40e-09,1;UBERON:0001172,2.40e-09,1;UBERON:0004913,3.05e-09,1;UBERON:0003703,3.05e-09,1;UBERON:0001174,3.05e-09,1;UBERON:0004914,3.05e-09,1;UBERON:0007029,5.31e-09,1;UBERON:0001456,9.17e-09,22;UBERON:0010077,9.20e-09,4;UBERON:0005389,9.20e-09,4;UBERON:0000484,9.20e-09,4;UBERON:0002546,9.20e-09,4;UBERON:0000965,9.20e-09,4;UBERON:0001803,9.20e-09,4;UBERON:0003073,9.20e-09,4;UBERON:0005426,9.20e-09,4;UBERON:0002294,1.55e-08,9;UBERON:0001173,1.55e-08,9;UBERON:0004912,1.55e-08,9;UBERON:0003056,6.18e-07,61;UBERON:0000058,9.51e-07,19 | |||
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| ||
|short_description=p19@TGFB2 | |short_description=p19@TGFB2 | ||
}} | }} |
Latest revision as of 04:47, 25 September 2015
Short description: | p19@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TGFB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_AK021874_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.34e-24 | 3 |
ciliated epithelial cell | 3.34e-24 | 3 |
multi-ciliated epithelial cell | 3.34e-24 | 3 |
non-pigmented ciliary epithelial cell | 3.34e-24 | 3 |
crystallin accumulating cell | 9.20e-09 | 4 |
vertebrate lens cell | 9.20e-09 | 4 |
lens epithelial cell | 9.20e-09 | 4 |
columnar/cuboidal epithelial cell | 4.23e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.82e-09 | 1 |
papillary adenocarcinoma | 4.19e-09 | 1 |