FFCP PHASE1:Hg19::chr1:215178908..215178935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |EntrezGene=3776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |HGNC=6277 | ||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |UniProt=O95069,Q6ZW95 | ||
|association_with_transcript=23bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |association_with_transcript=23bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | ||
|cluster_id=chr1:215178908..215178935,+ | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_3_at_KCNK2_5end | |description=CAGE_peak_3_at_KCNK2_5end | ||
|id=chr1:215178908..215178935,+ | |id=chr1:215178908..215178935,+ | ||
|ontology_enrichment_celltype=CL:0000057!8.26e-27!75;CL:0000055!1.25e-20!180;CL:0002620!4.18e-20!23;CL:0002334!2.78e-10!12;CL:0000048!1.99e-09!430;CL:0000723!6.39e-09!436;CL:0000034!2.83e-08!444;CL:0002556!6.70e-08!6;CL:0000134!2.23e-07!358;CL:0002320!3.41e-07!365 | |ontology_enrichment_celltype=CL:0000057!8.26e-27!75;CL:0000055!1.25e-20!180;CL:0002620!4.18e-20!23;CL:0002334!2.78e-10!12;CL:0000048!1.99e-09!430;CL:0000723!6.39e-09!436;CL:0000034!2.83e-08!444;CL:0002556!6.70e-08!6;CL:0000134!2.23e-07!358;CL:0002320!3.41e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.70e-18;23!CL:0002334;2.08e-16;12!CL:0000057;3.62e-10;73!CL:0002580;1.59e-09;3!CL:0002570;7.12e-09;8!CL:0000197;1.89e-08;6!CL:0000098;1.89e-08;6!CL:0002167;1.89e-08;6!CL:0002579;2.20e-08;3!CL:0000062;6.92e-07;9!CL:0002320;9.20e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.38e-29,76;CL:0002620,4.01e-18,23;CL:0002334,1.32e-16,12;CL:0000134,2.53e-11,354;CL:0002320,7.63e-11,361;CL:0000048,5.24e-10,427;CL:0000219,7.74e-10,386;CL:0000723,1.14e-09,433;CL:0002580,1.66e-09,3;CL:0000034,3.10e-09,441;CL:0002570,7.44e-09,8;CL:0002579,1.49e-08,3;CL:0000197,1.91e-08,6;CL:0000098,1.91e-08,6;CL:0002167,1.91e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.64e-08!5;DOID:450!3.64e-08!5;DOID:66!3.64e-08!5;DOID:423!3.64e-08!5;DOID:0080000!3.64e-08!5;DOID:11722!3.64e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.05e-14;5!DOID:450;1.05e-14;5!DOID:66;1.05e-14;5!DOID:423;1.05e-14;5!DOID:0080000;1.05e-14;5!DOID:11722;1.05e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.28e-14,5;DOID:450,1.28e-14,5;DOID:66,1.28e-14,5;DOID:423,1.28e-14,5;DOID:0080000,1.28e-14,5;DOID:11722,1.28e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.04e-15!45;UBERON:0002416!2.04e-15!45;UBERON:0002097!3.31e-14!40;UBERON:0003102!9.82e-13!95;UBERON:0000475!1.07e-09!365;UBERON:0000914!3.46e-08!83;UBERON:0002329!3.46e-08!83;UBERON:0003077!3.46e-08!83;UBERON:0003059!3.46e-08!83;UBERON:0007282!3.46e-08!83;UBERON:0009618!3.46e-08!83;UBERON:0007285!3.46e-08!83;UBERON:0002384!5.23e-08!375;UBERON:0001758!6.70e-08!6;UBERON:0003672!6.70e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.63e-13;41!UBERON:0003688;1.25e-10;6!UBERON:0002358;1.25e-10;6!UBERON:0003684;1.25e-10;6!UBERON:0001178;1.25e-10;6!UBERON:0002199;4.34e-10;46!UBERON:0002416;4.34e-10;46!UBERON:0004457;1.01e-09;9!UBERON:0000042;1.01e-09;9!UBERON:0003102;6.35e-08;50!UBERON:0000310;5.14e-07;10!UBERON:0002384;8.72e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.85e-16,41;UBERON:0002199,2.30e-15,46;UBERON:0002416,2.30e-15,46;UBERON:0002384,3.68e-12,371;UBERON:0003688,1.24e-10,6;UBERON:0002358,1.24e-10,6;UBERON:0003684,1.24e-10,6;UBERON:0001178,1.24e-10,6;UBERON:0003102,3.90e-10,99;UBERON:0004457,3.86e-07,12;UBERON:0000042,3.86e-07,12;UBERON:0000310,4.92e-07,10 | |||
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| ||
|short_description=p3@KCNK2 | |short_description=p3@KCNK2 | ||
}} | }} |
Latest revision as of 02:22, 25 September 2015
Short description: | p3@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | 23bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.38e-29 | 76 |
skin fibroblast | 4.01e-18 | 23 |
preadipocyte | 1.32e-16 | 12 |
mesenchymal cell | 2.53e-11 | 354 |
connective tissue cell | 7.63e-11 | 361 |
multi fate stem cell | 5.24e-10 | 427 |
motile cell | 7.74e-10 | 386 |
somatic stem cell | 1.14e-09 | 433 |
preadipocyte of the breast | 1.66e-09 | 3 |
stem cell | 3.10e-09 | 441 |
mesenchymal stem cell of adipose | 7.44e-09 | 8 |
omentum preadipocyte | 1.49e-08 | 3 |
receptor cell | 1.91e-08 | 6 |
sensory epithelial cell | 1.91e-08 | 6 |
olfactory epithelial cell | 1.91e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.85e-16 | 41 |
integument | 2.30e-15 | 46 |
integumental system | 2.30e-15 | 46 |
connective tissue | 3.68e-12 | 371 |
omentum | 1.24e-10 | 6 |
peritoneum | 1.24e-10 | 6 |
abdominal cavity | 1.24e-10 | 6 |
visceral peritoneum | 1.24e-10 | 6 |
surface structure | 3.90e-10 | 99 |
cavity lining | 3.86e-07 | 12 |
serous membrane | 3.86e-07 | 12 |
breast | 4.92e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.28e-14 | 5 |
myotonic disease | 1.28e-14 | 5 |
muscle tissue disease | 1.28e-14 | 5 |
myopathy | 1.28e-14 | 5 |
muscular disease | 1.28e-14 | 5 |
myotonic dystrophy | 1.28e-14 | 5 |