FFCP PHASE1:Hg19::chr1:209800857..209800874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209800857..209800874,- | |||
|coexpression_cluster_id=C571 | |||
|description=CAGE_peak_at_chr1:209800857..209800874,- | |description=CAGE_peak_at_chr1:209800857..209800874,- | ||
|id=chr1:209800857..209800874,- | |id=chr1:209800857..209800874,- | ||
|ontology_enrichment_celltype=CL:0002076!3.76e-29!43;CL:0000066!2.23e-23!254;CL:0002368!3.72e-22!13;CL:0000223!5.31e-19!59;CL:0002202!2.29e-14!9;CL:0002632!2.29e-14!9;CL:0002159!1.13e-12!13;CL:0000244!5.49e-10!4;CL:0000731!5.49e-10!4;CL:0000063!3.72e-08!578;CL:0002251!5.05e-08!21;CL:0002166!7.77e-08!3;CL:0002328!9.46e-08!3;CL:0002621!1.73e-07!3;CL:0000068!3.01e-07!3;CL:0000069!3.01e-07!3;CL:0000307!3.01e-07!3;CL:0000377!3.01e-07!3;CL:0002077!6.51e-07!33 | |ontology_enrichment_celltype=CL:0002076!3.76e-29!43;CL:0000066!2.23e-23!254;CL:0002368!3.72e-22!13;CL:0000223!5.31e-19!59;CL:0002202!2.29e-14!9;CL:0002632!2.29e-14!9;CL:0002159!1.13e-12!13;CL:0000244!5.49e-10!4;CL:0000731!5.49e-10!4;CL:0000063!3.72e-08!578;CL:0002251!5.05e-08!21;CL:0002166!7.77e-08!3;CL:0002328!9.46e-08!3;CL:0002621!1.73e-07!3;CL:0000068!3.01e-07!3;CL:0000069!3.01e-07!3;CL:0000307!3.01e-07!3;CL:0000377!3.01e-07!3;CL:0002077!6.51e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.59e-25;4!CL:0000731;2.59e-25;4!CL:0002368;1.49e-22;13!CL:0002159;2.14e-20;14!CL:0002328;5.41e-19;3!CL:0002166;5.41e-19;3!CL:0002076;8.62e-18;42!CL:0000312;2.61e-11;5!CL:0002202;3.72e-11;9!CL:0002632;3.72e-11;9!CL:0002231;1.19e-09;3!CL:0000240;1.65e-09;6!CL:0000311;1.65e-09;6!CL:0000079;1.65e-09;6!CL:0000237;1.65e-09;6!CL:0002077;2.23e-09;34!CL:0002621;4.14e-09;3!CL:0002379;2.74e-07;1!CL:0002327;7.05e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.30e-25,4;CL:0000731,2.30e-25,4;CL:0002368,1.91e-22,13;CL:0002076,3.17e-22,42;CL:0002159,1.19e-20,14;CL:0002166,2.75e-19,3;CL:0002328,4.80e-19,3;CL:0000066,2.56e-16,253;CL:0000223,2.22e-15,58;CL:0000312,1.86e-11,5;CL:0002202,3.68e-11,9;CL:0002632,3.68e-11,9;CL:0002077,2.55e-10,34;CL:0002231,1.20e-09,3;CL:0000240,1.25e-09,6;CL:0000311,1.25e-09,6;CL:0000079,1.25e-09,6;CL:0000237,1.25e-09,6;CL:0000036,1.25e-09,6;CL:0000357,1.25e-09,6;CL:0000114,1.25e-09,6;CL:0002621,3.24e-09,3;CL:0002321,2.91e-07,250;CL:0002379,3.62e-07,1;CL:0002327,8.19e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;1.65e-09;6!CL:0000114;1.65e-09;6!CL:0000223;6.84e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.74e-07;1!DOID:3565;2.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.62e-07,1;DOID:3565,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.11e-13!169;UBERON:0000925!6.11e-13!169;UBERON:0006595!6.11e-13!169;UBERON:0000365!1.87e-11!5;UBERON:0007196!7.61e-11!14;UBERON:0001558!7.61e-11!14;UBERON:0001004!5.29e-10!72;UBERON:0005910!1.90e-09!6;UBERON:0000065!6.13e-08!53;UBERON:0004815!9.46e-08!3;UBERON:0002031!9.46e-08!3;UBERON:0001949!1.73e-07!3;UBERON:0005178!3.49e-07!34;UBERON:0002224!3.49e-07!34;UBERON:0008947!5.26e-07!38;UBERON:0003258!5.26e-07!38;UBERON:0001007!6.08e-07!155;UBERON:0001555!6.08e-07!155;UBERON:0007026!6.08e-07!155;UBERON:0005181!6.79e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.68e-20;5!UBERON:0004815;5.41e-19;3!UBERON:0002031;5.41e-19;3!UBERON:0000486;3.86e-18;12!UBERON:0005910;6.01e-17;6!UBERON:0001708;2.18e-14;4!UBERON:0008895;2.18e-14;4!UBERON:0011159;1.29e-11;5!UBERON:0002185;1.29e-11;5!UBERON:0005911;2.69e-10;36!UBERON:0001949;4.14e-09;3!UBERON:0000485;1.97e-08;7!UBERON:0001911;7.05e-07;4!UBERON:0004807;9.23e-07;22!UBERON:0007196;9.94e-07;15!UBERON:0001558;9.94e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.44e-20,5;UBERON:0004815,4.80e-19,3;UBERON:0002031,4.80e-19,3;UBERON:0005910,5.56e-17,6;UBERON:0001708,1.32e-14,4;UBERON:0008895,1.32e-14,4;UBERON:0011159,8.67e-12,5;UBERON:0002185,1.20e-11,5;UBERON:0010188,6.64e-10,6;UBERON:0002539,6.64e-10,6;UBERON:0008816,6.64e-10,6;UBERON:0001949,3.24e-09,3;UBERON:0004119,1.37e-07,160;UBERON:0000925,1.37e-07,160;UBERON:0006595,1.37e-07,160;UBERON:0006554,2.33e-07,47;UBERON:0005153,2.60e-07,37;UBERON:0005157,3.08e-07,47;UBERON:0001008,3.51e-07,48;UBERON:0005911,3.60e-07,82;UBERON:0001911,8.19e-07,4;UBERON:0005333,8.19e-07,4;UBERON:0008425,8.19e-07,4;UBERON:0005311,8.19e-07,4;UBERON:0007196,9.88e-07,15;UBERON:0001558,9.88e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,1.83884244895785,1.204823675113,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.818718450173537,0,0.306083892370903,0,0,0,0,0,0.870627715885752,1.13477044938228,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5500670180478,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,2.72746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,1.91005047582099,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.53551746136921,1.55952606966625,0.806026704325635,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4263364557708,4.51196845785892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,5.95025695299521,3.45942121257191,0.638063562472921,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,2.17781969722645,0,3.01353760869861,3.36942951335251,3.99087138183008,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,2.86493381685228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.438535902517113,0,0.0969890164884194,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.999048047910651,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.28400018965175,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,1.24082554265728,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,1.83884244895785,1.204823675113,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.818718450173537,0,0.306083892370903,0,0,0,0,0,0.870627715885752,1.13477044938228,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5500670180478,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,2.72746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,1.91005047582099,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.53551746136921,1.55952606966625,0.806026704325635,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4263364557708,4.51196845785892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,5.95025695299521,3.45942121257191,0.638063562472921,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,2.17781969722645,0,3.01353760869861,3.36942951335251,3.99087138183008,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,2.86493381685228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.438535902517113,0,0.0969890164884194,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.999048047910651,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.28400018965175,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,1.24082554265728,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:209800857..209800874,- | |short_description=p@chr1:209800857..209800874,- | ||
}} | }} |
Latest revision as of 03:20, 28 July 2015
Short description: | p@chr1:209800857..209800874, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209800857..209800874, - |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.30e-25 | 4 |
urothelial cell | 2.30e-25 | 4 |
respiratory epithelial cell | 1.91e-22 | 13 |
endo-epithelial cell | 3.17e-22 | 42 |
general ecto-epithelial cell | 1.19e-20 | 14 |
epithelial cell of Malassez | 2.75e-19 | 3 |
bronchial epithelial cell | 4.80e-19 | 3 |
epithelial cell | 2.56e-16 | 253 |
endodermal cell | 2.22e-15 | 58 |
keratinocyte | 1.86e-11 | 5 |
epithelial cell of tracheobronchial tree | 3.68e-11 | 9 |
epithelial cell of lower respiratory tract | 3.68e-11 | 9 |
ecto-epithelial cell | 2.55e-10 | 34 |
epithelial cell of prostate | 1.20e-09 | 3 |
stratified squamous epithelial cell | 1.25e-09 | 6 |
keratin accumulating cell | 1.25e-09 | 6 |
stratified epithelial cell | 1.25e-09 | 6 |
keratinizing barrier epithelial cell | 1.25e-09 | 6 |
epithelial fate stem cell | 1.25e-09 | 6 |
stratified epithelial stem cell | 1.25e-09 | 6 |
surface ectodermal cell | 1.25e-09 | 6 |
gingival epithelial cell | 3.24e-09 | 3 |
embryonic cell | 2.91e-07 | 250 |
meningothelial cell | 3.62e-07 | 1 |
mammary gland epithelial cell | 8.19e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.44e-20 | 5 |
lower respiratory tract epithelium | 4.80e-19 | 3 |
epithelium of bronchus | 4.80e-19 | 3 |
transitional epithelium | 5.56e-17 | 6 |
jaw skeleton | 1.32e-14 | 4 |
splanchnocranium | 1.32e-14 | 4 |
primary subdivision of cranial skeletal system | 8.67e-12 | 5 |
bronchus | 1.20e-11 | 5 |
protuberance | 6.64e-10 | 6 |
pharyngeal arch | 6.64e-10 | 6 |
embryonic head | 6.64e-10 | 6 |
gingival epithelium | 3.24e-09 | 3 |
endoderm-derived structure | 1.37e-07 | 160 |
endoderm | 1.37e-07 | 160 |
presumptive endoderm | 1.37e-07 | 160 |
urinary system structure | 2.33e-07 | 47 |
epithelial bud | 2.60e-07 | 37 |
epithelial fold | 3.08e-07 | 47 |
renal system | 3.51e-07 | 48 |
endo-epithelium | 3.60e-07 | 82 |
mammary gland | 8.19e-07 | 4 |
mammary bud | 8.19e-07 | 4 |
mammary ridge | 8.19e-07 | 4 |
mammary placode | 8.19e-07 | 4 |
tracheobronchial tree | 9.88e-07 | 15 |
lower respiratory tract | 9.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.62e-07 | 1 |
meningioma | 3.62e-07 | 1 |