FFCP PHASE1:Hg19::chr15:74287035..74287117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5371 | |EntrezGene=5371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9113 | |HGNC=9113 | ||
|TSSclassifier=strong | |||
|UniProt=P29590,E9PBR7 | |UniProt=P29590,E9PBR7 | ||
|association_with_transcript=0bp_to_ENST00000268058,ENST00000268059,ENST00000354026,ENST00000395132_5end | |association_with_transcript=0bp_to_ENST00000268058,ENST00000268059,ENST00000354026,ENST00000395132_5end | ||
|cluster_id=chr15:74287035..74287117,+ | |||
|description=CAGE_peak_1_at_PML_5end | |description=CAGE_peak_1_at_PML_5end | ||
|id=chr15:74287035..74287117,+ | |id=chr15:74287035..74287117,+ | ||
|ontology_enrichment_celltype=CL:0000222!9.30e-19!119;CL:0002371!4.28e-15!591;CL:0000144!5.24e-13!625;CL:0000115!3.08e-12!35;CL:0000213!2.58e-11!57;CL:0000215!2.58e-11!57;CL:0002078!3.26e-11!44;CL:0000220!4.11e-11!246;CL:0002139!5.56e-11!24;CL:0002321!9.63e-11!248;CL:0000183!3.61e-10!59;CL:0000055!1.68e-09!180;CL:0000071!1.95e-08!18;CL:0002546!1.95e-08!18;CL:0000057!2.64e-08!75;CL:0000187!2.65e-08!54;CL:0000680!1.17e-07!57;CL:0000056!1.17e-07!57;CL:0000355!1.17e-07!57;CL:1000497!1.97e-07!18;CL:0002518!1.97e-07!18;CL:0000192!2.60e-07!42;CL:0000514!2.60e-07!42;CL:0000076!3.67e-07!62;CL:0000359!3.97e-07!32;CL:1000449!8.05e-07!16 | |ontology_enrichment_celltype=CL:0000222!9.30e-19!119;CL:0002371!4.28e-15!591;CL:0000144!5.24e-13!625;CL:0000115!3.08e-12!35;CL:0000213!2.58e-11!57;CL:0000215!2.58e-11!57;CL:0002078!3.26e-11!44;CL:0000220!4.11e-11!246;CL:0002139!5.56e-11!24;CL:0002321!9.63e-11!248;CL:0000183!3.61e-10!59;CL:0000055!1.68e-09!180;CL:0000071!1.95e-08!18;CL:0002546!1.95e-08!18;CL:0000057!2.64e-08!75;CL:0000187!2.65e-08!54;CL:0000680!1.17e-07!57;CL:0000056!1.17e-07!57;CL:0000355!1.17e-07!57;CL:1000497!1.97e-07!18;CL:0002518!1.97e-07!18;CL:0000192!2.60e-07!42;CL:0000514!2.60e-07!42;CL:0000076!3.67e-07!62;CL:0000359!3.97e-07!32;CL:1000449!8.05e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.72e-11;24!CL:0000115;1.21e-10;36!CL:0000071;2.02e-08;18!CL:0002078;7.72e-08;45!CL:0000213;8.98e-08;58!CL:0000215;8.98e-08;58!CL:0000359;3.98e-07;32!CL:1000497;4.63e-07;17!CL:0002518;4.63e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.55e-19,121;CL:0000115,1.05e-12,36;CL:0000213,9.84e-12,58;CL:0000215,9.84e-12,58;CL:0002078,1.18e-11,45;CL:0002321,2.87e-11,250;CL:0002139,5.56e-11,24;CL:0000187,1.30e-08,55;CL:0000071,1.95e-08,18;CL:0002546,1.95e-08,18;CL:0000057,3.02e-08,76;CL:0000680,5.91e-08,58;CL:0000056,5.91e-08,58;CL:0000355,5.91e-08,58;CL:0000192,1.26e-07,43;CL:0000514,1.26e-07,43;CL:0000076,1.68e-07,63;CL:0000359,3.97e-07,32;CL:1000497,4.46e-07,17;CL:0002518,4.46e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.02e-08;18!CL:0000222;4.46e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.64e-21!79;UBERON:0007798!2.64e-21!79;UBERON:0000055!7.84e-19!69;UBERON:0004872!3.22e-16!84;UBERON:0001981!5.03e-16!60;UBERON:0007500!5.03e-16!60;UBERON:0004537!5.03e-16!60;UBERON:0006965!5.03e-16!60;UBERON:0004535!3.22e-15!110;UBERON:0001009!1.52e-14!113;UBERON:0003914!3.07e-14!118;UBERON:0001637!3.65e-11!42;UBERON:0003509!3.65e-11!42;UBERON:0004572!3.65e-11!42;UBERON:0004573!2.45e-10!33;UBERON:0004571!2.45e-10!33;UBERON:0000486!7.21e-10!82;UBERON:0000914!5.43e-09!83;UBERON:0002329!5.43e-09!83;UBERON:0003077!5.43e-09!83;UBERON:0003059!5.43e-09!83;UBERON:0007282!5.43e-09!83;UBERON:0009618!5.43e-09!83;UBERON:0007285!5.43e-09!83;UBERON:0004290!1.60e-08!70;UBERON:0001986!1.95e-08!18;UBERON:0004638!1.95e-08!18;UBERON:0004852!1.95e-08!18;UBERON:0005256!2.86e-08!143;UBERON:0003081!3.59e-08!216;UBERON:0000947!3.74e-08!21;UBERON:0010191!3.74e-08!21;UBERON:0004111!3.76e-08!241;UBERON:0001134!1.55e-07!61;UBERON:0002036!1.55e-07!61;UBERON:0003082!1.55e-07!61;UBERON:0004876!1.61e-07!20;UBERON:0000477!2.81e-07!286;UBERON:0002385!3.15e-07!63;UBERON:0001015!3.15e-07!63;UBERON:0000383!3.15e-07!63;UBERON:0000487!3.58e-07!22;UBERON:0000080!5.01e-07!18;UBERON:0002120!5.01e-07!18;UBERON:0004875!5.01e-07!18;UBERON:0005721!5.01e-07!18;UBERON:0005754!5.01e-07!18;UBERON:0007297!5.01e-07!18;UBERON:0004211!8.05e-07!16;UBERON:0001285!8.05e-07!16;UBERON:0007684!8.05e-07!16;UBERON:0003220!8.05e-07!16;UBERON:0004208!8.05e-07!16;UBERON:0006555!8.83e-07!17;UBERON:0005103!8.83e-07!17;UBERON:0000083!8.83e-07!17;UBERON:0009201!8.83e-07!17;UBERON:0004819!8.83e-07!17;UBERON:0006553!8.83e-07!17;UBERON:0003074!8.83e-07!17;UBERON:0003060!8.83e-07!17;UBERON:0003887!9.32e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.73e-10;33!UBERON:0004571;9.73e-10;33!UBERON:0000055;1.61e-09;65!UBERON:0007500;4.58e-09;56!UBERON:0001981;4.58e-09;56!UBERON:0004537;4.58e-09;56!UBERON:0002049;7.48e-09;75!UBERON:0007798;7.48e-09;75!UBERON:0001637;8.19e-09;42!UBERON:0003509;8.19e-09;42!UBERON:0004572;8.19e-09;42!UBERON:0003914;9.07e-09;74!UBERON:0004638;2.02e-08;18!UBERON:0001986;2.02e-08;18!UBERON:0004852;2.02e-08;18!UBERON:0000947;3.73e-08;21!UBERON:0010191;3.73e-08;21!UBERON:0000487;3.50e-07;22 | |||
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1814767648 | ||
|short_description=p1@PML | |short_description=p1@PML | ||
}} | }} |
Latest revision as of 00:14, 19 September 2015
Short description: | p1@PML |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PML_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000268058, ENST00000268059, ENST00000354026, ENST00000395132_5end |
EntrezGene: | PML |
HGNC: | 9113 |
UniProt: | P29590E9PBR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.55e-19 | 121 |
endothelial cell | 1.05e-12 | 36 |
lining cell | 9.84e-12 | 58 |
barrier cell | 9.84e-12 | 58 |
meso-epithelial cell | 1.18e-11 | 45 |
embryonic cell | 2.87e-11 | 250 |
endothelial cell of vascular tree | 5.56e-11 | 24 |
muscle cell | 1.30e-08 | 55 |
blood vessel endothelial cell | 1.95e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-08 | 18 |
fibroblast | 3.02e-08 | 76 |
muscle precursor cell | 5.91e-08 | 58 |
myoblast | 5.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-08 | 58 |
smooth muscle cell | 1.26e-07 | 43 |
smooth muscle myoblast | 1.26e-07 | 43 |
squamous epithelial cell | 1.68e-07 | 63 |
vascular associated smooth muscle cell | 3.97e-07 | 32 |
kidney cell | 4.46e-07 | 17 |
kidney epithelial cell | 4.46e-07 | 17 |