FFCP PHASE1:Hg19::chr15:74219026..74219037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4016 | |EntrezGene=4016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |HGNC=6665 | ||
|TSSclassifier=strong | |||
|UniProt=Q08397 | |UniProt=Q08397 | ||
|association_with_transcript=223bp_to_ENST00000395162_5end | |association_with_transcript=223bp_to_ENST00000395162_5end | ||
|cluster_id=chr15:74219026..74219037,+ | |||
|description=CAGE_peak_3_at_LOXL1_5end | |description=CAGE_peak_3_at_LOXL1_5end | ||
|id=chr15:74219026..74219037,+ | |id=chr15:74219026..74219037,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.45e-42!180;CL:0000057!8.45e-23!75;CL:0000680!1.75e-21!57;CL:0000056!1.75e-21!57;CL:0000355!1.75e-21!57;CL:0000183!6.60e-20!59;CL:0000187!2.41e-19!54;CL:0000192!7.60e-16!42;CL:0000514!7.60e-16!42;CL:0000393!9.85e-16!60;CL:0000211!9.85e-16!60;CL:0000048!3.30e-15!430;CL:0000359!4.63e-15!32;CL:0000723!2.84e-14!436;CL:0000034!2.17e-13!444;CL:0002371!3.66e-12!591;CL:0000144!4.63e-11!625;CL:0002620!4.63e-10!23;CL:0000548!1.58e-09!679;CL:0000004!1.58e-09!679;CL:0000255!1.58e-09!679;CL:0000222!1.89e-09!119;CL:0000012!3.51e-09!682;CL:0002334!1.55e-08!12;CL:0000136!5.25e-07!15 | |ontology_enrichment_celltype=CL:0000055!4.45e-42!180;CL:0000057!8.45e-23!75;CL:0000680!1.75e-21!57;CL:0000056!1.75e-21!57;CL:0000355!1.75e-21!57;CL:0000183!6.60e-20!59;CL:0000187!2.41e-19!54;CL:0000192!7.60e-16!42;CL:0000514!7.60e-16!42;CL:0000393!9.85e-16!60;CL:0000211!9.85e-16!60;CL:0000048!3.30e-15!430;CL:0000359!4.63e-15!32;CL:0000723!2.84e-14!436;CL:0000034!2.17e-13!444;CL:0002371!3.66e-12!591;CL:0000144!4.63e-11!625;CL:0002620!4.63e-10!23;CL:0000548!1.58e-09!679;CL:0000004!1.58e-09!679;CL:0000255!1.58e-09!679;CL:0000222!1.89e-09!119;CL:0000012!3.51e-09!682;CL:0002334!1.55e-08!12;CL:0000136!5.25e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.60e-15;32!CL:0000192;1.09e-12;43!CL:0002334;1.93e-10;12!CL:0002620;3.36e-10;23!CL:0000187;1.46e-08;55!CL:0002559;3.86e-08;5!CL:0002539;9.57e-08;10!CL:0000057;2.29e-07;73!CL:0002320;2.62e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.24e-21,76;CL:0000680,4.00e-17,58;CL:0000056,4.00e-17,58;CL:0000355,4.00e-17,58;CL:0000048,4.68e-17,427;CL:0000723,2.37e-16,433;CL:0000359,1.90e-15,32;CL:0000034,1.91e-15,441;CL:0000192,1.13e-14,43;CL:0000514,1.13e-14,43;CL:0000187,1.48e-14,55;CL:0000393,3.34e-12,61;CL:0000211,3.34e-12,61;CL:0002620,2.33e-10,23;CL:0002334,2.68e-10,12;CL:0002320,3.46e-09,361;CL:0002559,4.44e-08,5;CL:0002539,9.64e-08,10;CL:0000134,9.30e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-12;43!CL:0000355;8.52e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.94e-23!83;UBERON:0002329!1.94e-23!83;UBERON:0003077!1.94e-23!83;UBERON:0003059!1.94e-23!83;UBERON:0007282!1.94e-23!83;UBERON:0009618!1.94e-23!83;UBERON:0007285!1.94e-23!83;UBERON:0004290!1.21e-21!70;UBERON:0002385!3.30e-19!63;UBERON:0001015!3.30e-19!63;UBERON:0000383!3.30e-19!63;UBERON:0001134!7.33e-19!61;UBERON:0002036!7.33e-19!61;UBERON:0003082!7.33e-19!61;UBERON:0000486!1.65e-18!82;UBERON:0001637!4.74e-12!42;UBERON:0003509!4.74e-12!42;UBERON:0004572!4.74e-12!42;UBERON:0004573!8.90e-11!33;UBERON:0004571!8.90e-11!33;UBERON:0005256!1.52e-10!143;UBERON:0002049!1.04e-09!79;UBERON:0007798!1.04e-09!79;UBERON:0004872!2.15e-09!84;UBERON:0004535!2.51e-08!110;UBERON:0002199!3.19e-08!45;UBERON:0002416!3.19e-08!45;UBERON:0001009!4.17e-08!113;UBERON:0001981!9.03e-08!60;UBERON:0007500!9.03e-08!60;UBERON:0004537!9.03e-08!60;UBERON:0006965!9.03e-08!60;UBERON:0002100!9.50e-08!216;UBERON:0002384!1.47e-07!375;UBERON:0002097!5.62e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!1.94e-23!83;UBERON:0002329!1.94e-23!83;UBERON:0003077!1.94e-23!83;UBERON:0003059!1.94e-23!83;UBERON:0007282!1.94e-23!83;UBERON:0009618!1.94e-23!83;UBERON:0007285!1.94e-23!83;UBERON:0004290!1.21e-21!70;UBERON:0002385!3.30e-19!63;UBERON:0001015!3.30e-19!63;UBERON:0000383!3.30e-19!63;UBERON:0001134!7.33e-19!61;UBERON:0002036!7.33e-19!61;UBERON:0003082!7.33e-19!61;UBERON:0000486!1.65e-18!82;UBERON:0001637!4.74e-12!42;UBERON:0003509!4.74e-12!42;UBERON:0004572!4.74e-12!42;UBERON:0004573!8.90e-11!33;UBERON:0004571!8.90e-11!33;UBERON:0005256!1.52e-10!143;UBERON:0002049!1.04e-09!79;UBERON:0007798!1.04e-09!79;UBERON:0004872!2.15e-09!84;UBERON:0004535!2.51e-08!110;UBERON:0002199!3.19e-08!45;UBERON:0002416!3.19e-08!45;UBERON:0001009!4.17e-08!113;UBERON:0001981!9.03e-08!60;UBERON:0007500!9.03e-08!60;UBERON:0004537!9.03e-08!60;UBERON:0006965!9.03e-08!60;UBERON:0002100!9.50e-08!216;UBERON:0002384!1.47e-07!375;UBERON:0002097!5.62e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.20e-13;33!UBERON:0004571;5.20e-13;33!UBERON:0001637;1.71e-09;42!UBERON:0003509;1.71e-09;42!UBERON:0004572;1.71e-09;42!UBERON:0002073;3.86e-08;5!UBERON:0000947;5.97e-08;21!UBERON:0010191;5.97e-08;21!UBERON:0004905;6.97e-08;8!UBERON:0000982;6.97e-08;8!UBERON:0004770;6.97e-08;8!UBERON:0004237;9.57e-08;10!UBERON:0004695;9.57e-08;10!UBERON:0002111;9.57e-08;10!UBERON:0004178;9.57e-08;10!UBERON:0002384;1.23e-07;198!UBERON:0002204;1.35e-07;70!UBERON:0002199;1.97e-07;46!UBERON:0002416;1.97e-07;46!UBERON:0002097;2.53e-07;41!UBERON:0005284;7.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.76e-18,73;UBERON:0002329,9.45e-18,71;UBERON:0003059,9.45e-18,71;UBERON:0007282,9.45e-18,71;UBERON:0004290,9.45e-18,71;UBERON:0009618,9.45e-18,71;UBERON:0003077,2.48e-17,72;UBERON:0007285,2.48e-17,72;UBERON:0000486,1.09e-15,83;UBERON:0001134,2.50e-15,62;UBERON:0002036,2.50e-15,62;UBERON:0003082,2.50e-15,62;UBERON:0007503,4.58e-15,78;UBERON:0004573,6.07e-15,33;UBERON:0004571,6.07e-15,33;UBERON:0002385,1.60e-14,64;UBERON:0001015,1.60e-14,64;UBERON:0000383,1.60e-14,64;UBERON:0001637,1.35e-12,42;UBERON:0003509,1.35e-12,42;UBERON:0004572,1.35e-12,42;UBERON:0002199,6.99e-11,46;UBERON:0002416,6.99e-11,46;UBERON:0002384,3.94e-10,371;UBERON:0002097,9.22e-10,41;UBERON:0002204,3.98e-08,167;UBERON:0000947,4.43e-08,21;UBERON:0010191,4.43e-08,21;UBERON:0002073,4.44e-08,5;UBERON:0005086,4.44e-08,5;UBERON:0002049,5.09e-08,78;UBERON:0007798,5.09e-08,78;UBERON:0004905,8.47e-08,8;UBERON:0000982,8.47e-08,8;UBERON:0004770,8.47e-08,8;UBERON:0004237,9.64e-08,10;UBERON:0004695,9.64e-08,10;UBERON:0002111,9.64e-08,10;UBERON:0004178,9.64e-08,10;UBERON:0005256,2.97e-07,122;UBERON:0007500,5.57e-07,59;UBERON:0001981,5.57e-07,59;UBERON:0004537,5.57e-07,59;UBERON:0006965,5.57e-07,59;UBERON:0005284,7.51e-07,5 | |||
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| ||
|short_description=p3@LOXL1 | |short_description=p3@LOXL1 | ||
}} | }} |
Latest revision as of 23:58, 18 September 2015
Short description: | p3@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_ENST00000395162_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.24e-21 | 76 |
muscle precursor cell | 4.00e-17 | 58 |
myoblast | 4.00e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.00e-17 | 58 |
multi fate stem cell | 4.68e-17 | 427 |
somatic stem cell | 2.37e-16 | 433 |
vascular associated smooth muscle cell | 1.90e-15 | 32 |
stem cell | 1.91e-15 | 441 |
smooth muscle cell | 1.13e-14 | 43 |
smooth muscle myoblast | 1.13e-14 | 43 |
muscle cell | 1.48e-14 | 55 |
electrically responsive cell | 3.34e-12 | 61 |
electrically active cell | 3.34e-12 | 61 |
skin fibroblast | 2.33e-10 | 23 |
preadipocyte | 2.68e-10 | 12 |
connective tissue cell | 3.46e-09 | 361 |
hair follicle cell | 4.44e-08 | 5 |
aortic smooth muscle cell | 9.64e-08 | 10 |
mesenchymal cell | 9.30e-07 | 354 |