FFCP PHASE1:Hg19::chr1:207206095..207206121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79098 | |EntrezGene=79098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28667 | |HGNC=28667 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BW04 | |UniProt=Q9BW04 | ||
|association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | |association_with_transcript=0bp_to_ENST00000461135,NM_001083924,NM_023938,uc001hfd.2,uc009xcb.1_5end | ||
|cluster_id=chr1:207206095..207206121,- | |||
|coexpression_cluster_id=C1844 | |||
|description=CAGE_peak_2_at_C1orf116_5end | |description=CAGE_peak_2_at_C1orf116_5end | ||
|id=chr1:207206095..207206121,- | |id=chr1:207206095..207206121,- | ||
|ontology_enrichment_celltype=CL:0000066!4.92e-28!254;CL:0002076!2.66e-26!43;CL:0000223!2.30e-20!59;CL:0002251!8.50e-13!21;CL:0002368!3.95e-12!13;CL:0002202!2.56e-08!9;CL:0002632!2.56e-08!9;CL:0002159!6.40e-08!13;CL:1000507!4.15e-07!12;CL:1000494!4.15e-07!12 | |ontology_enrichment_celltype=CL:0000066!4.92e-28!254;CL:0002076!2.66e-26!43;CL:0000223!2.30e-20!59;CL:0002251!8.50e-13!21;CL:0002368!3.95e-12!13;CL:0002202!2.56e-08!9;CL:0002632!2.56e-08!9;CL:0002159!6.40e-08!13;CL:1000507!4.15e-07!12;CL:1000494!4.15e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.02e-24;42!CL:0002368;3.56e-16;13!CL:0002251;3.68e-15;20!CL:0002202;5.51e-11;9!CL:0002632;5.51e-11;9!CL:1000507;6.67e-10;10!CL:1000494;6.67e-10;10!CL:0002159;8.35e-10;14!CL:1000497;5.63e-08;17!CL:0002518;5.63e-08;17!CL:1000449;1.12e-07;15!CL:0000622;2.70e-07;5!CL:0000244;3.19e-07;4!CL:0000731;3.19e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.72e-32,42;CL:0000066,1.46e-30,253;CL:0000223,6.60e-23,58;CL:0002368,3.25e-16,13;CL:0002251,3.52e-15,20;CL:0002202,5.24e-11,9;CL:0002632,5.24e-11,9;CL:1000507,6.04e-10,10;CL:1000494,6.04e-10,10;CL:0002159,8.16e-10,14;CL:1000497,5.33e-08,17;CL:0002518,5.33e-08,17;CL:1000449,1.04e-07,15;CL:0000622,3.12e-07,5;CL:0000244,3.34e-07,4;CL:0000731,3.34e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;2.74e-12;58!UBERON:0006595;2.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!6.06e-16!106;DOID:1749!1.32e-11!14;DOID:0050687!1.09e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.66e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.75e-15,14;DOID:305,9.11e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.85e-31!169;UBERON:0000925!4.85e-31!169;UBERON:0006595!4.85e-31!169;UBERON:0001007!5.02e-24!155;UBERON:0001555!5.02e-24!155;UBERON:0007026!5.02e-24!155;UBERON:0004921!2.36e-21!129;UBERON:0004185!2.36e-21!129;UBERON:0001004!3.09e-20!72;UBERON:0000077!1.52e-19!130;UBERON:0000466!2.79e-17!126;UBERON:0000464!3.31e-17!104;UBERON:0005911!1.55e-15!82;UBERON:0001041!8.51e-15!98;UBERON:0000065!9.36e-15!53;UBERON:0000161!9.32e-14!35;UBERON:0005153!2.09e-13!37;UBERON:0005178!6.73e-12!34;UBERON:0002224!6.73e-12!34;UBERON:0005177!9.62e-12!107;UBERON:0001008!1.15e-11!45;UBERON:0005181!2.51e-11!35;UBERON:0006554!4.37e-11!44;UBERON:0008947!7.23e-10!38;UBERON:0003258!7.23e-10!38;UBERON:0000166!7.71e-10!21;UBERON:0000072!1.01e-09!46;UBERON:0005157!2.45e-09!51;UBERON:0003104!3.44e-09!238;UBERON:0009142!3.44e-09!238;UBERON:0009569!1.55e-08!113;UBERON:0003064!1.62e-08!37;UBERON:0002048!1.66e-08!22;UBERON:0000117!1.66e-08!22;UBERON:0000171!1.66e-08!22;UBERON:0000170!1.66e-08!22;UBERON:0005597!1.66e-08!22;UBERON:0000118!1.66e-08!22;UBERON:0000062!1.83e-08!511;UBERON:0000922!3.94e-08!612;UBERON:0007196!4.77e-08!14;UBERON:0001558!4.77e-08!14;UBERON:0000344!7.40e-08!12;UBERON:0002553!1.29e-07!70;UBERON:0000165!3.27e-07!28;UBERON:0000930!3.27e-07!28;UBERON:0004807!3.84e-07!28;UBERON:0009773!4.15e-07!12;UBERON:0001231!4.15e-07!12;UBERON:0004810!4.15e-07!12;UBERON:0002050!6.86e-07!605;UBERON:0005423!6.86e-07!605;UBERON:0000058!8.64e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.71e-12;30!UBERON:0001008;2.71e-12;30!UBERON:0005178;6.48e-12;34!UBERON:0002224;6.48e-12;34!UBERON:0000161;1.01e-11;19!UBERON:0000166;1.01e-11;19!UBERON:0005181;1.41e-11;35!UBERON:0000165;1.30e-10;28!UBERON:0004211;6.67e-10;10!UBERON:0009773;6.67e-10;10!UBERON:0001231;6.67e-10;10!UBERON:0004810;6.67e-10;10!UBERON:0002048;1.06e-09;22!UBERON:0000117;1.06e-09;22!UBERON:0000171;1.06e-09;22!UBERON:0000170;1.06e-09;22!UBERON:0004807;1.11e-09;22!UBERON:0001041;1.14e-09;14!UBERON:0005911;1.59e-09;36!UBERON:0004921;4.21e-09;33!UBERON:0001004;8.15e-09;65!UBERON:0007196;1.26e-08;15!UBERON:0001558;1.26e-08;15!UBERON:0000344;1.49e-08;20!UBERON:0001555;2.04e-08;54!UBERON:0000365;4.84e-08;5!UBERON:0000065;9.47e-08;44!UBERON:0006555;1.12e-07;15!UBERON:0004819;1.12e-07;15!UBERON:0001285;1.12e-07;15!UBERON:0007684;1.12e-07;15!UBERON:0002294;2.14e-07;7!UBERON:0001173;2.14e-07;7!UBERON:0000486;2.19e-07;12!UBERON:0001044;2.89e-07;6!UBERON:0003293;2.89e-07;6!UBERON:0003294;2.89e-07;6!UBERON:0010047;2.89e-07;6!UBERON:0003408;2.89e-07;6!UBERON:0000167;2.89e-07;6!UBERON:0000489;5.41e-07;29!UBERON:0002113;7.32e-07;24!UBERON:0011143;7.32e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.05e-29,160;UBERON:0000925,3.05e-29,160;UBERON:0006595,3.05e-29,160;UBERON:0001007,2.09e-23,145;UBERON:0001555,2.09e-23,145;UBERON:0007026,2.09e-23,145;UBERON:0004921,6.52e-19,118;UBERON:0001004,9.74e-19,74;UBERON:0000161,1.22e-17,36;UBERON:0005153,1.07e-14,37;UBERON:0005911,1.31e-14,82;UBERON:0001008,6.17e-14,48;UBERON:0005178,9.42e-14,34;UBERON:0002224,9.42e-14,34;UBERON:0006554,3.48e-13,47;UBERON:0005181,3.55e-13,35;UBERON:0001041,7.81e-13,87;UBERON:0000166,7.83e-13,22;UBERON:0005157,9.28e-13,47;UBERON:0000065,1.76e-12,54;UBERON:0005177,2.32e-12,101;UBERON:0003102,2.79e-10,99;UBERON:0000165,4.65e-10,29;UBERON:0000930,4.65e-10,29;UBERON:0004810,6.04e-10,10;UBERON:0002048,9.90e-10,22;UBERON:0000117,9.90e-10,22;UBERON:0000171,9.90e-10,22;UBERON:0000170,9.90e-10,22;UBERON:0005597,9.90e-10,22;UBERON:0000118,9.90e-10,22;UBERON:0008947,6.56e-09,38;UBERON:0003258,6.56e-09,38;UBERON:0007196,1.14e-08,15;UBERON:0001558,1.14e-08,15;UBERON:0000344,1.41e-08,20;UBERON:0009569,3.82e-08,112;UBERON:0000365,4.51e-08,5;UBERON:0004211,1.04e-07,15;UBERON:0009773,1.04e-07,15;UBERON:0001231,1.04e-07,15;UBERON:0001285,1.04e-07,15;UBERON:0007684,1.04e-07,15;UBERON:0004208,1.04e-07,15;UBERON:0001044,3.10e-07,6;UBERON:0003293,3.10e-07,6;UBERON:0003294,3.10e-07,6;UBERON:0010047,3.10e-07,6;UBERON:0000167,3.10e-07,6;UBERON:0005423,3.96e-07,581;UBERON:0006555,4.40e-07,16;UBERON:0004819,4.40e-07,16;UBERON:0000072,5.22e-07,47;UBERON:0000915,6.12e-07,52;UBERON:0004807,7.56e-07,28;UBERON:0000922,8.28e-07,592 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,18.1843113011117,34.8900583986214,1.31064823278103,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,14.7107395916628,20.1807965581428,25.1432726913416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,34.243757099499,17.0560843680838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.834865806405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2428252176547,12.0008293059967,21.2235400587863,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0,0,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,9.59309820636286,0,15.6942908134335,15.7362454560667,14.2751140824516,13.4253245479868,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,10.4148919483293,6.80520466763455,15.1353903367814,9.59091997096074,14.568541808278,0,0,0,0.288239906833923,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,2.72814814301633,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,10.8273493963774,42.2651739215764,0,0,0.131124414959424,7.21919380651859,6.08421163124877,6.27479815341484,2.92278449306521,2.74434235121477,0,0,0,0,0.541892875087706,1.50506932156456,20.3901018436031,16.6215201785745,6.04461837749881,0,0,0,0,0,2.47298427954533,0,0,17.2279661398852,19.5018073810956,0,0,0,0,0,0,0,0,0,10.4129496677416,16.5283457933991,13.6545602369205,14.7690360049103,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7597621197482,23.4605796437526,16.3336477291984,3.38917682796405,21.5252686335615,20.2165770801151,18.1806362950037,8.27004240745054,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,1.29694662238543,0,2.37937552888281,0,0,7.10616626344992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63059139075251,0,1.08182271390393,0,0,0.748562161632879,0,0,0,0,11.2209907826714,2.07875276582847,20.5797670406485,0,0,0,0,0,0.796991953004279,0,2.26739473068848,0,0,0,17.0749867179921,7.8769316857268,0,2.66337195219721,0,0,0,0,0,0,0.262379999988587,0,1.593108275997,5.84783395673362,0,0,0,0,0,0,0,0,0,0,0,9.06254337810921,2.00070672109872,0,0,0,0.108647371922008,3.50901275705111,0.366390373607449,0,0,0,0.166211681900156,0,0.588187602953219,1.1747511088309,0,0.158936578980379,0.843992258112108,2.93819054686466,0.565412285735763,0,0.995261931078505,2.83064206410685,0.611030144933625,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,1.52542140314453,1.04135843001079,22.1462818156493,8.09650621197744,0,0,0,0.146178634172371,0,16.2941547700545,0,1.58186518546373,0,0,0,7.43095254392251,5.05000567584662,4.4825128895264,0.39961921916426,1.72908500584927,0,0,8.35517828331268,0,8.48498524620464,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,1.16495949527454,0.393915911536118,0.247247575143499,0.202210631562555,0,0,0,0,0,0.137539436597234,0,0.2249738915515,7.7380195455795,0.0607495566580247,11.404779378375,1.18208560948797,3.19972987623488,0.105600336519406,0,6.52511670886114,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,1.71086837884329,4.22889013390003,15.4841748223157,10.375484136578,19.4692356013182,0,0,0,13.4051664131738,0,0,0,0,0.471162288750703,0,0,0,0,0,0.18628920882415,0,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,17.3275941154074,0,0,0,0,0,30.2139736674,17.4181632809232,0,0,0,0,0,0.212574920101683,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,4.2203518955441,6.96021367751668,17.0588596625161,17.3288499225507,0,0,0,0.150420656698515,0,1.56302802246618,0,0,22.4741251049909,0,0,0,0,0,2.19303106742873,2.48105589194647,0,3.83287282918786,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,3.66400906740301,3.00324785108587,5.5730095923865,0,8.96870922604125,0,7.12561051021451,0,0,0,0,0,0,1.03608082081518,3.414369541879,8.2951159417691,9.89522925286638,0,0,0.423387050190929,5.4985648450572,0,0,2.12525320415805,9.91317359513954,7.1931575739539,0,0,0,2.91426595835484,0,0.198950775161368,0,0.11294608203896,0,1.50962843566674,4.24457869593696,2.62271472604749,5.17349025997675,0.490296643507811,2.35676547101626,0,0,0,0,0.187967835959707,0.128915775947154,0,11.9631138865791,18.7034282009317,3.12941330087756,5.11235471772562,1.83491713361816,0,0,0,0,2.645134202577,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0,0,0,9.595529185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| ||
|short_description=p2@C1orf116 | |short_description=p2@C1orf116 | ||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p2@C1orf116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf116_5end |
Coexpression cluster: | C1844_squamous_epidermoid_bronchioalveolar_Corneal_Alveolar_Esophageal_Urothelial |
Association with transcript: | 0bp_to_ENST00000461135, NM_001083924, NM_023938, uc001hfd.2, uc009xcb.1_5end |
EntrezGene: | C1orf116 |
HGNC: | 28667 |
UniProt: | Q9BW04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.72e-32 | 42 |
epithelial cell | 1.46e-30 | 253 |
endodermal cell | 6.60e-23 | 58 |
respiratory epithelial cell | 3.25e-16 | 13 |
epithelial cell of alimentary canal | 3.52e-15 | 20 |
epithelial cell of tracheobronchial tree | 5.24e-11 | 9 |
epithelial cell of lower respiratory tract | 5.24e-11 | 9 |
kidney tubule cell | 6.04e-10 | 10 |
nephron tubule epithelial cell | 6.04e-10 | 10 |
general ecto-epithelial cell | 8.16e-10 | 14 |
kidney cell | 5.33e-08 | 17 |
kidney epithelial cell | 5.33e-08 | 17 |
epithelial cell of nephron | 1.04e-07 | 15 |
acinar cell | 3.12e-07 | 5 |
transitional epithelial cell | 3.34e-07 | 4 |
urothelial cell | 3.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.75e-15 | 14 |
carcinoma | 9.11e-11 | 106 |