FFCP PHASE1:Hg19::chr15:71568153..71568160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_BC008840_5end | |association_with_transcript=-19bp_to_BC008840_5end | ||
|cluster_id=chr15:71568153..71568160,+ | |||
|description=CAGE_peak_1_at_BC008840_5end | |description=CAGE_peak_1_at_BC008840_5end | ||
|id=chr15:71568153..71568160,+ | |id=chr15:71568153..71568160,+ | ||
|ontology_enrichment_celltype=CL:0000306!1.76e-11!4;CL:0002222!1.76e-11!4;CL:0002224!1.76e-11!4;CL:0000064!2.96e-09!3;CL:0005012!2.96e-09!3;CL:0000067!2.96e-09!3;CL:0002304!2.96e-09!3;CL:0000708!1.49e-08!3;CL:0000075!2.94e-08!27;CL:0000066!6.78e-08!254 | |ontology_enrichment_celltype=CL:0000306!1.76e-11!4;CL:0002222!1.76e-11!4;CL:0002224!1.76e-11!4;CL:0000064!2.96e-09!3;CL:0005012!2.96e-09!3;CL:0000067!2.96e-09!3;CL:0002304!2.96e-09!3;CL:0000708!1.49e-08!3;CL:0000075!2.94e-08!27;CL:0000066!6.78e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002379;4.29e-12;1!CL:0000342;1.07e-11;1!CL:1001319;1.07e-11;1!CL:1000600;1.07e-11;1!CL:0002550;1.07e-11;1!CL:0002565;1.07e-11;1!CL:0000306;2.63e-11;4!CL:0002222;2.63e-11;4!CL:0002224;2.63e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.53e-12,1;CL:0002550,1.32e-11,1;CL:1001319,1.47e-11,1;CL:1000600,1.47e-11,1;CL:0000342,1.63e-11,1;CL:0002565,1.63e-11,1;CL:0000306,2.25e-11,4;CL:0002222,2.25e-11,4;CL:0002224,2.25e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;2.93e-12;1!DOID:3620;4.29e-12;1!DOID:3565;4.29e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.93e-12,1;DOID:3620,4.53e-12,1;DOID:3565,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.24e-15!11;UBERON:0001801!1.47e-14!14;UBERON:0000488!9.02e-12!4;UBERON:0002203!1.39e-11!6;UBERON:0001768!1.39e-11!6;UBERON:0010077!1.76e-11!4;UBERON:0005389!1.76e-11!4;UBERON:0000484!1.76e-11!4;UBERON:0002546!1.76e-11!4;UBERON:0000965!1.76e-11!4;UBERON:0001803!1.76e-11!4;UBERON:0003073!1.76e-11!4;UBERON:0005426!1.76e-11!4;UBERON:0000019!3.21e-10!19;UBERON:0000047!3.21e-10!19;UBERON:0004088!3.21e-10!19;UBERON:0003072!3.21e-10!19;UBERON:0003071!3.21e-10!19;UBERON:0004128!3.21e-10!19;UBERON:0000020!7.14e-10!23;UBERON:0000970!1.29e-09!20;UBERON:0001032!2.27e-09!24;UBERON:0004456!2.27e-09!24;UBERON:0001778!2.96e-09!3;UBERON:0001775!2.96e-09!3;UBERON:0002104!4.56e-09!21;UBERON:0001456!4.56e-09!21;UBERON:0003210!1.49e-08!3;UBERON:0002200!2.21e-08!11;UBERON:0006876!2.21e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.74e-15;11!UBERON:0001801;4.55e-12;14!UBERON:0005795;1.07e-11;1!UBERON:0004645;1.07e-11;1!UBERON:0002506;1.07e-11;1!UBERON:0001256;1.07e-11;1!UBERON:0001769;1.07e-11;1!UBERON:0001259;1.07e-11;1!UBERON:0010077;2.63e-11;4!UBERON:0005389;2.63e-11;4!UBERON:0000488;2.63e-11;4!UBERON:0000484;2.63e-11;4!UBERON:0000965;2.63e-11;4!UBERON:0001803;2.63e-11;4!UBERON:0001264;3.69e-10;10!UBERON:0002075;1.26e-09;18!UBERON:0000019;5.99e-09;19!UBERON:0000047;5.99e-09;19!UBERON:0004088;5.99e-09;19!UBERON:0010230;5.99e-09;19!UBERON:0000970;1.64e-08;20!UBERON:0002104;4.10e-08;21!UBERON:0001456;4.10e-08;21!UBERON:0002203;7.85e-08;6!UBERON:0001768;7.85e-08;6!UBERON:0002200;7.85e-08;6!UBERON:0000020;2.01e-07;23!UBERON:0001032;4.04e-07;24!UBERON:0004456;4.04e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.36e-15,11;UBERON:0001801,4.05e-12,14;UBERON:0004645,1.47e-11,1;UBERON:0001256,1.47e-11,1;UBERON:0001259,1.47e-11,1;UBERON:0002506,1.63e-11,1;UBERON:0001769,1.63e-11,1;UBERON:0010077,2.25e-11,4;UBERON:0005389,2.25e-11,4;UBERON:0000484,2.25e-11,4;UBERON:0002546,2.25e-11,4;UBERON:0000965,2.25e-11,4;UBERON:0001803,2.25e-11,4;UBERON:0003073,2.25e-11,4;UBERON:0005426,2.25e-11,4;UBERON:0000488,2.49e-11,4;UBERON:0001264,3.87e-10,10;UBERON:0002075,1.40e-09,18;UBERON:0000019,1.52e-08,20;UBERON:0000047,1.52e-08,20;UBERON:0010312,1.52e-08,20;UBERON:0004088,1.52e-08,20;UBERON:0010230,1.52e-08,20;UBERON:0003072,1.52e-08,20;UBERON:0004128,1.52e-08,20;UBERON:0003071,1.52e-08,20;UBERON:0000970,3.80e-08,21;UBERON:0002104,3.80e-08,21;UBERON:0002203,7.58e-08,6;UBERON:0001768,7.58e-08,6;UBERON:0002200,7.58e-08,6;UBERON:0001456,8.76e-08,22;UBERON:0000020,3.78e-07,24;UBERON:0001032,3.78e-07,24;UBERON:0004456,3.78e-07,24 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.886917589850256,1.75669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,1.17160715916898,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,1.02940686179115,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,3.7844959707788,0,0.211125408127993,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81034942126376,0.311064574191741,0.664653872707185,6.61983911750998,2.19753042885058,1.19472429772959,1.42304773014896,0.138674673013139,0,0.489961987071888,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,1.02652102730598,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,3.05845565607623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,5.52287940848081,0,0,0,0,0,0.982631505060581,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05824249194267,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | ||
|short_description=p1@BC008840 | |short_description=p1@BC008840 | ||
}} | }} |
Latest revision as of 03:55, 25 July 2015
Short description: | p1@BC008840 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC008840_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_BC008840_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.53e-12 | 1 |
fibroblast of the conjuctiva | 1.32e-11 | 1 |
bladder cell | 1.47e-11 | 1 |
lower urinary tract cell | 1.47e-11 | 1 |
pigment cell (sensu Vertebrata) | 1.63e-11 | 1 |
iris pigment epithelial cell | 1.63e-11 | 1 |
crystallin accumulating cell | 2.25e-11 | 4 |
vertebrate lens cell | 2.25e-11 | 4 |
lens epithelial cell | 2.25e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.36e-15 | 11 |
anterior segment of eyeball | 4.05e-12 | 14 |
urinary bladder urothelium | 1.47e-11 | 1 |
wall of urinary bladder | 1.47e-11 | 1 |
mucosa of urinary bladder | 1.47e-11 | 1 |
iris epithelium | 1.63e-11 | 1 |
iris | 1.63e-11 | 1 |
cuboidal epithelium | 2.25e-11 | 4 |
transparent eye structure | 2.25e-11 | 4 |
simple cuboidal epithelium | 2.25e-11 | 4 |
cranial placode | 2.25e-11 | 4 |
lens of camera-type eye | 2.25e-11 | 4 |
epithelium of lens | 2.25e-11 | 4 |
lens placode | 2.25e-11 | 4 |
lens vesicle | 2.25e-11 | 4 |
atypical epithelium | 2.49e-11 | 4 |
pancreas | 3.87e-10 | 10 |
viscus | 1.40e-09 | 18 |
camera-type eye | 1.52e-08 | 20 |
simple eye | 1.52e-08 | 20 |
immature eye | 1.52e-08 | 20 |
ocular region | 1.52e-08 | 20 |
eyeball of camera-type eye | 1.52e-08 | 20 |
optic cup | 1.52e-08 | 20 |
optic vesicle | 1.52e-08 | 20 |
eye primordium | 1.52e-08 | 20 |
eye | 3.80e-08 | 21 |
visual system | 3.80e-08 | 21 |
vasculature of eye | 7.58e-08 | 6 |
uvea | 7.58e-08 | 6 |
vasculature of head | 7.58e-08 | 6 |
face | 8.76e-08 | 22 |
sense organ | 3.78e-07 | 24 |
sensory system | 3.78e-07 | 24 |
entire sense organ system | 3.78e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.93e-12 | 1 |
central nervous system cancer | 4.53e-12 | 1 |
meningioma | 4.53e-12 | 1 |