FFCP PHASE1:Hg19::chr15:68805200..68805208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68805200..68805208,+ | |||
|coexpression_cluster_id=C3507 | |||
|description=CAGE_peak_at_chr15:68805200..68805208,+ | |description=CAGE_peak_at_chr15:68805200..68805208,+ | ||
|id=chr15:68805200..68805208,+ | |id=chr15:68805200..68805208,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.07e-17!12;CL:0002580!1.94e-14!3;CL:0002579!3.29e-14!3;CL:0000057!1.90e-12!75;CL:0000667!6.01e-12!6;CL:0000058!6.01e-12!6;CL:0000138!6.01e-12!6;CL:0000153!6.84e-12!9;CL:0000447!6.84e-12!9;CL:0000055!1.05e-08!180;CL:0002620!8.11e-08!23;CL:0000327!1.57e-07!14 | |ontology_enrichment_celltype=CL:0002334!2.07e-17!12;CL:0002580!1.94e-14!3;CL:0002579!3.29e-14!3;CL:0000057!1.90e-12!75;CL:0000667!6.01e-12!6;CL:0000058!6.01e-12!6;CL:0000138!6.01e-12!6;CL:0000153!6.84e-12!9;CL:0000447!6.84e-12!9;CL:0000055!1.05e-08!180;CL:0002620!8.11e-08!23;CL:0000327!1.57e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.84e-34;1!CL:0002569;6.78e-23;6!CL:0000081;5.42e-13;11!CL:0002580;2.07e-12;3!CL:0002579;2.89e-12;3!CL:0002334;5.08e-12;12!CL:0000349;6.15e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,6.78e-23,6;CL:0000081,5.42e-13,11;CL:0002580,2.07e-12,3;CL:0002579,3.24e-12,3;CL:0002334,5.37e-12,12;CL:0000349,6.15e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.38e-08!5;DOID:450!5.38e-08!5;DOID:66!5.38e-08!5;DOID:423!5.38e-08!5;DOID:0080000!5.38e-08!5;DOID:11722!5.38e-08!5;DOID:1192!6.91e-07!3 | |ontology_enrichment_disease=DOID:17!5.38e-08!5;DOID:450!5.38e-08!5;DOID:66!5.38e-08!5;DOID:423!5.38e-08!5;DOID:0080000!5.38e-08!5;DOID:11722!5.38e-08!5;DOID:1192!6.91e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:3369;7.06e-34;1!DOID:1192;2.89e-12;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.05e-34,1;DOID:1192,2.59e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.59e-18!6;UBERON:0002358!2.59e-18!6;UBERON:0003684!2.59e-18!6;UBERON:0001178!2.59e-18!6;UBERON:0004457!1.44e-12!12;UBERON:0000042!1.44e-12!12;UBERON:0000310!2.23e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;6.78e-23;6!UBERON:0003104;8.62e-20;7!UBERON:0009142;8.62e-20;7!UBERON:0002331;3.47e-14;10!UBERON:0003688;8.97e-07;6!UBERON:0002358;8.97e-07;6!UBERON:0003684;8.97e-07;6!UBERON:0001178;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,6.78e-23,6;UBERON:0002331,3.47e-14,10;UBERON:0000358,3.47e-14,10;UBERON:0000307,3.47e-14,10;UBERON:0000091,3.47e-14,10;UBERON:0000087,3.47e-14,10;UBERON:0007010,3.47e-14,10;UBERON:0007806,3.47e-14,10;UBERON:0008780,3.47e-14,10;UBERON:0005728,3.47e-14,10;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
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| ||
|short_description=p@chr15:68805200..68805208,+ | |short_description=p@chr15:68805200..68805208,+ | ||
}} | }} |
Latest revision as of 03:43, 25 July 2015
Short description: | p@chr15:68805200..68805208, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68805200..68805208, + |
Coexpression cluster: | C3507_Preadipocyte_mesodermal_Multipotent_Ewing_Chondrocyte_Osteoblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 6.78e-23 | 6 |
blood cell | 5.42e-13 | 11 |
preadipocyte of the breast | 2.07e-12 | 3 |
omentum preadipocyte | 3.24e-12 | 3 |
preadipocyte | 5.37e-12 | 12 |
extraembryonic cell | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 6.78e-23 | 6 |
umbilical cord | 3.47e-14 | 10 |
blastocyst | 3.47e-14 | 10 |
blastula | 3.47e-14 | 10 |
bilaminar disc | 3.47e-14 | 10 |
inner cell mass | 3.47e-14 | 10 |
cleaving embryo | 3.47e-14 | 10 |
connecting stalk | 3.47e-14 | 10 |
inner cell mass derived epiblast | 3.47e-14 | 10 |
extraembryonic mesoderm | 3.47e-14 | 10 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.05e-34 | 1 |
peripheral nervous system neoplasm | 2.59e-12 | 3 |