FFCP PHASE1:Hg19::chr15:67426669..67426682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:67426669..67426682,+ | |||
|coexpression_cluster_id=C464 | |||
|description=CAGE_peak_at_chr15:67426669..67426682,+ | |description=CAGE_peak_at_chr15:67426669..67426682,+ | ||
|id=chr15:67426669..67426682,+ | |id=chr15:67426669..67426682,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.70e-13!12;CL:1000494!1.70e-13!12;CL:1000497!3.52e-11!18;CL:0002518!3.52e-11!18;CL:1000449!7.79e-10!16;CL:0000159!5.35e-08!2;CL:0000569!1.57e-07!4;CL:0000011!1.57e-07!4 | |ontology_enrichment_celltype=CL:1000507!1.70e-13!12;CL:1000494!1.70e-13!12;CL:1000497!3.52e-11!18;CL:0002518!3.52e-11!18;CL:1000449!7.79e-10!16;CL:0000159!5.35e-08!2;CL:0000569!1.57e-07!4;CL:0000011!1.57e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.53e-26;10!CL:1000494;5.53e-26;10!CL:1000449;1.31e-17;15!CL:1000497;1.24e-15;17!CL:0002518;1.24e-15;17!CL:0000650;2.05e-15;2!CL:1000500;2.05e-15;2!CL:1000618;2.05e-15;2!CL:1001318;2.05e-15;2!CL:0002173;2.05e-15;2!CL:0000346;9.90e-11;3!CL:1000428;9.90e-11;3!CL:0000669;2.26e-08;4!CL:0002559;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.02e-26,10;CL:1000494,6.02e-26,10;CL:1000449,1.38e-17,15;CL:1000497,1.30e-15,17;CL:0002518,1.30e-15,17;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000346,1.09e-10,3;CL:1000428,1.09e-10,3;CL:0000669,2.61e-08,4;CL:0002559,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!2.04e-08!2 | |ontology_enrichment_disease=DOID:4468!2.04e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.69e-57;2!DOID:299;5.65e-11;25!DOID:120;3.26e-10;27!DOID:193;1.48e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.51e-57,2;DOID:299,5.28e-11,25;DOID:120,3.06e-10,27;DOID:193,1.39e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.70e-13!12;UBERON:0001231!1.70e-13!12;UBERON:0004810!1.70e-13!12;UBERON:0002113!7.64e-11!27;UBERON:0003918!7.64e-11!27;UBERON:0005095!7.64e-11!27;UBERON:0007687!7.64e-11!27;UBERON:0004211!7.79e-10!16;UBERON:0001285!7.79e-10!16;UBERON:0007684!7.79e-10!16;UBERON:0003220!7.79e-10!16;UBERON:0004208!7.79e-10!16;UBERON:0003887!2.75e-09!21;UBERON:0006555!3.44e-09!17;UBERON:0005103!3.44e-09!17;UBERON:0000083!3.44e-09!17;UBERON:0009201!3.44e-09!17;UBERON:0004819!3.44e-09!17;UBERON:0006553!3.44e-09!17;UBERON:0003074!3.44e-09!17;UBERON:0003060!3.44e-09!17;UBERON:0000489!8.02e-09!32;UBERON:0000080!1.29e-08!18;UBERON:0002120!1.29e-08!18;UBERON:0004875!1.29e-08!18;UBERON:0005721!1.29e-08!18;UBERON:0005754!1.29e-08!18;UBERON:0007297!1.29e-08!18;UBERON:0000488!4.67e-08!4;UBERON:0004876!1.21e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.53e-26;10!UBERON:0009773;5.53e-26;10!UBERON:0001231;5.53e-26;10!UBERON:0004810;5.53e-26;10!UBERON:0006555;1.31e-17;15!UBERON:0004819;1.31e-17;15!UBERON:0001285;1.31e-17;15!UBERON:0007684;1.31e-17;15!UBERON:0003567;2.05e-15;2!UBERON:0003838;2.05e-15;2!UBERON:0003586;2.05e-15;2!UBERON:0005169;2.05e-15;2!UBERON:0002321;2.05e-15;2!UBERON:0005215;2.05e-15;2!UBERON:0002303;2.05e-15;2!UBERON:0002319;2.05e-15;2!UBERON:0002113;2.70e-11;24!UBERON:0011143;2.70e-11;24!UBERON:0000412;9.90e-11;3!UBERON:0001992;9.90e-11;3!UBERON:0000489;1.81e-09;29!UBERON:0006554;3.56e-09;30!UBERON:0001008;3.56e-09;30!UBERON:0003891;2.26e-08;4!UBERON:0002073;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,6.02e-26,10;UBERON:0004211,1.38e-17,15;UBERON:0009773,1.38e-17,15;UBERON:0001231,1.38e-17,15;UBERON:0001285,1.38e-17,15;UBERON:0007684,1.38e-17,15;UBERON:0004208,1.38e-17,15;UBERON:0006555,1.54e-16,16;UBERON:0004819,1.54e-16,16;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0000412,1.09e-10,3;UBERON:0001992,1.09e-10,3;UBERON:0002113,1.82e-10,26;UBERON:0003918,1.82e-10,26;UBERON:0011143,1.82e-10,26;UBERON:0005095,1.82e-10,26;UBERON:0007687,1.82e-10,26;UBERON:0000489,6.88e-09,31;UBERON:0003891,2.61e-08,4;UBERON:0002073,6.39e-07,5;UBERON:0005086,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.15403067420883,1.56869953835371,1.46139224653261,0.73886140225013,0,0,0,0,1.35473218771926,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54094000036884,1.95879369790977,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.15403067420883,1.56869953835371,1.46139224653261,0.73886140225013,0,0,0,0,1.35473218771926,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54094000036884,1.95879369790977,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:67426669..67426682,+ | |short_description=p@chr15:67426669..67426682,+ | ||
}} | }} |
Latest revision as of 03:37, 25 July 2015
Short description: | p@chr15:67426669..67426682, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:67426669..67426682, + |
Coexpression cluster: | C464_clear_serous_pagetoid_squamous_chorionic_thyroid_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.02e-26 | 10 |
nephron tubule epithelial cell | 6.02e-26 | 10 |
epithelial cell of nephron | 1.38e-17 | 15 |
kidney cell | 1.30e-15 | 17 |
kidney epithelial cell | 1.30e-15 | 17 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
hair follicle dermal papilla cell | 1.09e-10 | 3 |
stem cell of epidermis | 1.09e-10 | 3 |
pericyte cell | 2.61e-08 | 4 |
hair follicle cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 6.02e-26 | 10 |
nephron epithelium | 1.38e-17 | 15 |
renal tubule | 1.38e-17 | 15 |
nephron tubule | 1.38e-17 | 15 |
nephron | 1.38e-17 | 15 |
uriniferous tubule | 1.38e-17 | 15 |
nephrogenic mesenchyme | 1.38e-17 | 15 |
excretory tube | 1.54e-16 | 16 |
kidney epithelium | 1.54e-16 | 16 |
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
dermal papilla | 1.09e-10 | 3 |
papillary layer of dermis | 1.09e-10 | 3 |
kidney | 1.82e-10 | 26 |
kidney mesenchyme | 1.82e-10 | 26 |
upper urinary tract | 1.82e-10 | 26 |
kidney rudiment | 1.82e-10 | 26 |
kidney field | 1.82e-10 | 26 |
cavitated compound organ | 6.88e-09 | 31 |
stroma | 2.61e-08 | 4 |
hair follicle | 6.39e-07 | 5 |
hair follicle placode | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.51e-57 | 2 |
adenocarcinoma | 5.28e-11 | 25 |
female reproductive organ cancer | 3.06e-10 | 27 |
reproductive organ cancer | 1.39e-09 | 29 |