FFCP PHASE1:Hg19::chr11:46342005..46342050,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:46342005..46342050,+
|short_description=p@chr11:46342005..46342050,+
|description=CAGE_peak_at_chr11:46342005..46342050,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:46342005..46342050,+ | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_at_chr11:46342005..46342050,+ | |||
|id=chr11:46342005..46342050,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-33!180;CL:0000057!3.49e-21!75;CL:0000680!4.47e-15!57;CL:0000056!4.47e-15!57;CL:0000355!4.47e-15!57;CL:0000187!1.59e-14!54;CL:0000183!2.75e-14!59;CL:0000192!1.45e-13!42;CL:0000514!1.45e-13!42;CL:0000393!7.30e-13!60;CL:0000211!7.30e-13!60;CL:0002620!1.16e-10!23;CL:0000359!4.27e-09!32;CL:0000222!3.48e-07!119;CL:0000048!7.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.78e-10;43!CL:0002620;8.13e-10;23!CL:0002334;1.97e-09;12!CL:0000057;7.00e-09;73!CL:0000134;5.38e-08;55!CL:0000359;7.21e-08;32!CL:0000187;8.66e-08;55!CL:0002539;1.16e-07;10!CL:0000048;2.66e-07;58!CL:0002320;8.69e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.56e-25,76;CL:0000048,2.60e-15,427;CL:0000723,1.38e-14,433;CL:0000034,1.16e-13,441;CL:0000192,2.64e-13,43;CL:0000514,2.64e-13,43;CL:0000187,5.96e-12,55;CL:0000680,1.35e-11,58;CL:0000056,1.35e-11,58;CL:0000355,1.35e-11,58;CL:0000393,7.29e-10,61;CL:0000211,7.29e-10,61;CL:0002620,8.06e-10,23;CL:0002334,4.06e-09,12;CL:0000359,4.29e-08,32;CL:0002320,1.01e-07,361;CL:0002539,1.17e-07,10;CL:0000134,2.74e-07,354;CL:0000222,4.03e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.78e-10;43!CL:0000355;5.56e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.99e-07;5!DOID:450;9.99e-07;5!DOID:66;9.99e-07;5!DOID:423;9.99e-07;5!DOID:0080000;9.99e-07;5!DOID:11722;9.99e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.46e-07,5;DOID:450,9.46e-07,5;DOID:66,9.46e-07,5;DOID:423,9.46e-07,5;DOID:0080000,9.46e-07,5;DOID:11722,9.46e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.48e-13!83;UBERON:0002329!1.48e-13!83;UBERON:0003077!1.48e-13!83;UBERON:0003059!1.48e-13!83;UBERON:0007282!1.48e-13!83;UBERON:0009618!1.48e-13!83;UBERON:0007285!1.48e-13!83;UBERON:0004290!2.32e-13!70;UBERON:0002385!5.16e-13!63;UBERON:0001015!5.16e-13!63;UBERON:0000383!5.16e-13!63;UBERON:0001134!8.35e-13!61;UBERON:0002036!8.35e-13!61;UBERON:0003082!8.35e-13!61;UBERON:0005256!4.65e-12!143;UBERON:0003102!4.06e-11!95;UBERON:0000486!1.58e-10!82;UBERON:0000475!5.82e-10!365;UBERON:0002199!1.39e-08!45;UBERON:0002416!1.39e-08!45;UBERON:0000490!1.51e-07!138;UBERON:0002100!1.68e-07!216;UBERON:0001135!1.82e-07!15;UBERON:0005156!7.69e-07!59;UBERON:0000990!7.69e-07!59;UBERON:0002097!9.03e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;9.23e-08;198!UBERON:0004237;1.16e-07;10!UBERON:0004695;1.16e-07;10!UBERON:0002111;1.16e-07;10!UBERON:0004178;1.16e-07;10!UBERON:0001135;5.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.09e-10,62;UBERON:0002036,3.09e-10,62;UBERON:0003082,3.09e-10,62;UBERON:0002385,1.25e-09,64;UBERON:0001015,1.25e-09,64;UBERON:0000383,1.25e-09,64;UBERON:0007524,1.69e-09,73;UBERON:0002329,3.00e-09,71;UBERON:0003059,3.00e-09,71;UBERON:0007282,3.00e-09,71;UBERON:0004290,3.00e-09,71;UBERON:0009618,3.00e-09,71;UBERON:0003102,3.53e-09,99;UBERON:0002199,5.26e-09,46;UBERON:0002416,5.26e-09,46;UBERON:0003077,5.45e-09,72;UBERON:0007285,5.45e-09,72;UBERON:0007503,5.55e-09,78;UBERON:0002384,2.03e-08,371;UBERON:0000486,7.94e-08,83;UBERON:0004237,1.17e-07,10;UBERON:0004695,1.17e-07,10;UBERON:0002111,1.17e-07,10;UBERON:0004178,1.17e-07,10;UBERON:0005256,2.81e-07,122;UBERON:0002097,3.96e-07,41;UBERON:0001135,6.16e-07,15 | |||
|phase1_expression=0.363356758541113,2.5692062866918,1.26858963686374,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,1.89515962028049,0.783556884599516,0.737201809504527,1.39560233594486,0.873765488520689,3.4289707169699,0.37129905888014,0,2.6893005858071,1.80808358407193,1.46062018077475,1.46379839637152,0.123121058076788,0.816002764977012,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,2.1686349143074,2.00535164254356,2.02785126545153,1.5905718941022,0.486634870302636,0.0945348171640679,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.264818361626438,1.14734648299525,2.4826786753885,1.68203280042692,3.20246987189115,3.45334567784024,0,0.404132016209064,0,1.51357427644931,0,2.57753575017176,0.312160076830321,0.570471821544449,0.597794722207204,1.05691048779388,0.323745888736263,0.702254033511242,1.22492502752936,0.491337269247072,2.16984140469107,2.37600571456411,5.68713937340681,2.73048408581408,4.31170885089743,0.673344455816265,1.37630371859161,1.38532057742091,2.19488810440419,1.5324389789951,0.901428353439581,0.453728732640084,3.40840307808838,2.77624605464138,2.33125091275518,3.00091096084402,3.81294358182224,1.28820270022815,3.90845398296339,2.36286865137773,3.21542117031955,0.252433774244115,1.47279837827679,3.23292113637624,4.61512470271599,3.52632343796741,1.52604533079439,0,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,3.85944562915731,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,1.6462960453256,0,0,0,0,0,0.983907508344908,0.857839051492628,0.219500570817251,0,0,0.0925884451585296,1.62904152655162,0,1.44331342025273,0.34779121492523,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.87192013766656,0.8800594298514,1.80980402060889,3.57656445851882,4.22651376278,5.05282421511254,4.16029747645464,1.80045161983499,0,1.5985330740966,3.28849385413739,14.1081617401775,3.29296134712308,0,1.06617584622764,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,3.35474797688216,3.44585807502342,0,1.01346914667305,0.61642896765115,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.613457458595699,1.00034104211935,0.271265023699736,3.53550464602372,8.02930449587228,3.15404830067869,0.937131319941706,1.50473049863859,0,0,10.627609576567,0.553107505625109,1.04260337361699,1.56640925970192,2.40200396667599,0,0,0,0.303127571446259,3.32870879020994,3.32629322662648,1.48864684691266,1.07423381301644,5.89386198309454,2.17836553734692,1.02341449813341,4.50390979202101,0,2.46735510084249,1.24293207719189,1.64254312027618,8.30807086693794,1.16210378459959,0.604297247958111,0.200506470303285,0.184161977871793,2.18147451512753,4.73437036817464,4.98272776845812,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,3.08454505380579,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0,3.84591752237042,1.89771849817352,1.14853107599234,1.30012049207304,9.64103579064957,0.386682873168488,0.154048617114644,1.22802939780904,0.413509717453592,0.537101224341368,1.16013355131383,0.767039646744908,2.58192903375538,0,0,0.127612712494584,0,4.64845549297286,7.55549632393536,2.0911118104818,1.23213432070436,1.06461206063404,0.869932992075073,1.11194531462352,0,0.372158369359667,0.632758849437452,0.571890581771475,1.02359116524534,1.71175595213568,0.95460974377781,2.35484592059769,0.719489830333259,2.19629623788844,2.35624804691373,0.606547444719948,0,0,2.92580243453754,2.92456187557541,0,2.45699840534374,7.7772987574542,3.39024349860728,1.10273068709225,1.32687795048244,2.19225442626881,4.05142873986681,1.31178950409327,1.01455188481352,0.92947049429925,0.563391205064483,1.29070216983646,1.76848273823618,1.426684205925,0.709522128141196,0.844430541190656,2.96365403663912,1.89736586882858,1.74967360122491,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0.422250816255987,0.597743964753209,0,0,0.715880777515084,0.123084805461069,2.79935628895627,0.0898683511473268,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.797594390929008,0,0,0.108647371922008,0.638002319463839,0.457987967009312,0,0,0,0,0,0.588187602953219,0.503464760927528,0,0,0,0,0.565412285735763,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0.0969890164884194,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| ||
|short_description=p@chr11:46342005..46342050,+ | |||
}} | }} |
Latest revision as of 22:25, 23 July 2015
Short description: | p@chr11:46342005..46342050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46342005..46342050, + |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.56e-25 | 76 |
multi fate stem cell | 2.60e-15 | 427 |
somatic stem cell | 1.38e-14 | 433 |
stem cell | 1.16e-13 | 441 |
smooth muscle cell | 2.64e-13 | 43 |
smooth muscle myoblast | 2.64e-13 | 43 |
muscle cell | 5.96e-12 | 55 |
muscle precursor cell | 1.35e-11 | 58 |
myoblast | 1.35e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-11 | 58 |
electrically responsive cell | 7.29e-10 | 61 |
electrically active cell | 7.29e-10 | 61 |
skin fibroblast | 8.06e-10 | 23 |
preadipocyte | 4.06e-09 | 12 |
vascular associated smooth muscle cell | 4.29e-08 | 32 |
connective tissue cell | 1.01e-07 | 361 |
aortic smooth muscle cell | 1.17e-07 | 10 |
mesenchymal cell | 2.74e-07 | 354 |
mesodermal cell | 4.03e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.09e-10 | 62 |
striated muscle tissue | 3.09e-10 | 62 |
myotome | 3.09e-10 | 62 |
muscle tissue | 1.25e-09 | 64 |
musculature | 1.25e-09 | 64 |
musculature of body | 1.25e-09 | 64 |
dense mesenchyme tissue | 1.69e-09 | 73 |
somite | 3.00e-09 | 71 |
presomitic mesoderm | 3.00e-09 | 71 |
presumptive segmental plate | 3.00e-09 | 71 |
dermomyotome | 3.00e-09 | 71 |
trunk paraxial mesoderm | 3.00e-09 | 71 |
surface structure | 3.53e-09 | 99 |
integument | 5.26e-09 | 46 |
integumental system | 5.26e-09 | 46 |
paraxial mesoderm | 5.45e-09 | 72 |
presumptive paraxial mesoderm | 5.45e-09 | 72 |
epithelial vesicle | 5.55e-09 | 78 |
connective tissue | 2.03e-08 | 371 |
multilaminar epithelium | 7.94e-08 | 83 |
blood vessel smooth muscle | 1.17e-07 | 10 |
arterial system smooth muscle | 1.17e-07 | 10 |
artery smooth muscle tissue | 1.17e-07 | 10 |
aorta smooth muscle tissue | 1.17e-07 | 10 |
trunk mesenchyme | 2.81e-07 | 122 |
skin of body | 3.96e-07 | 41 |
smooth muscle tissue | 6.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.46e-07 | 5 |
myotonic disease | 9.46e-07 | 5 |
muscle tissue disease | 9.46e-07 | 5 |
myopathy | 9.46e-07 | 5 |
muscular disease | 9.46e-07 | 5 |
myotonic dystrophy | 9.46e-07 | 5 |