FFCP PHASE1:Hg19::chr11:44117242..44117253,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:44117242..44117253,+
|short_description=p3@EXT2
|description=CAGE_peak_3_at_EXT2_5end
|association_with_transcript=-13bp_to_,13bp_to_ENST00000358681,ENST0...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2132 | |EntrezGene=2132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3513 | |HGNC=3513 | ||
|UniProt=C9JU51, | |TSSclassifier=strong | ||
|UniProt=C9JU51,E9PNL9 | |||
|association_with_transcript=-13bp_to_,13bp_to_ENST00000358681,ENST00000527014_5end | |||
|cluster_id=chr11:44117242..44117253,+ | |||
|coexpression_cluster_id=C2131 | |||
|description=CAGE_peak_3_at_EXT2_5end | |||
|id=chr11:44117242..44117253,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.85e-28!180;CL:0000220!6.96e-22!246;CL:0002321!1.72e-21!248;CL:0000222!2.01e-17!119;CL:0000057!8.23e-16!75;CL:0000680!2.54e-13!57;CL:0000056!2.54e-13!57;CL:0000355!2.54e-13!57;CL:0000359!3.99e-13!32;CL:0000183!1.89e-12!59;CL:0000187!2.06e-12!54;CL:0000192!8.00e-12!42;CL:0000514!8.00e-12!42;CL:0000393!1.02e-10!60;CL:0000211!1.02e-10!60;CL:0000144!7.65e-10!625;CL:0002371!3.00e-09!591;CL:0000548!6.24e-08!679;CL:0000004!6.24e-08!679;CL:0000255!6.24e-08!679;CL:0000012!1.13e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.69e-12;32!CL:0000192;1.41e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.07e-21,250;CL:0000222,1.46e-17,121;CL:0000057,2.70e-16,76;CL:0000680,3.91e-13,58;CL:0000056,3.91e-13,58;CL:0000355,3.91e-13,58;CL:0000359,3.99e-13,32;CL:0000187,3.14e-12,55;CL:0000192,1.34e-11,43;CL:0000514,1.34e-11,43;CL:0000393,1.41e-10,61;CL:0000211,1.41e-10,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.41e-08;43!CL:0000355;7.02e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.34e-17!79;UBERON:0007798!1.34e-17!79;UBERON:0000055!9.98e-17!69;UBERON:0005256!4.60e-16!143;UBERON:0002100!5.63e-16!216;UBERON:0003914!2.19e-15!118;UBERON:0001981!3.22e-15!60;UBERON:0007500!3.22e-15!60;UBERON:0004537!3.22e-15!60;UBERON:0006965!3.22e-15!60;UBERON:0000475!7.61e-15!365;UBERON:0004872!8.54e-15!84;UBERON:0001637!1.37e-14!42;UBERON:0003509!1.37e-14!42;UBERON:0004572!1.37e-14!42;UBERON:0000486!1.60e-14!82;UBERON:0004573!4.33e-14!33;UBERON:0004571!4.33e-14!33;UBERON:0000914!5.28e-14!83;UBERON:0002329!5.28e-14!83;UBERON:0003077!5.28e-14!83;UBERON:0003059!5.28e-14!83;UBERON:0007282!5.28e-14!83;UBERON:0009618!5.28e-14!83;UBERON:0007285!5.28e-14!83;UBERON:0004290!1.49e-12!70;UBERON:0000490!1.71e-12!138;UBERON:0003104!3.63e-12!238;UBERON:0009142!3.63e-12!238;UBERON:0001134!4.11e-12!61;UBERON:0002036!4.11e-12!61;UBERON:0003082!4.11e-12!61;UBERON:0002385!7.61e-12!63;UBERON:0001015!7.61e-12!63;UBERON:0000383!7.61e-12!63;UBERON:0000468!8.34e-12!659;UBERON:0000467!7.53e-11!625;UBERON:0003102!8.75e-11!95;UBERON:0000480!1.52e-10!626;UBERON:0000481!5.20e-10!347;UBERON:0004535!8.28e-10!110;UBERON:0001009!3.55e-09!113;UBERON:0000119!5.04e-09!312;UBERON:0000483!7.32e-09!309;UBERON:0002199!8.76e-08!45;UBERON:0002416!8.76e-08!45;UBERON:0000947!1.55e-07!21;UBERON:0010191!1.55e-07!21;UBERON:0004111!1.79e-07!241;UBERON:0000477!2.44e-07!286;UBERON:0002097!7.16e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.17e-13;33!UBERON:0004571;9.17e-13;33!UBERON:0001637;7.39e-11;42!UBERON:0003509;7.39e-11;42!UBERON:0004572;7.39e-11;42!UBERON:0000055;6.78e-09;65!UBERON:0007500;1.44e-08;56!UBERON:0001981;1.44e-08;56!UBERON:0004537;1.44e-08;56!UBERON:0000947;2.10e-07;21!UBERON:0010191;2.10e-07;21!UBERON:0002049;2.11e-07;75!UBERON:0007798;2.11e-07;75!UBERON:0003914;3.66e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.16e-17,78;UBERON:0007798,4.16e-17,78;UBERON:0003104,1.96e-16,160;UBERON:0009142,1.96e-16,160;UBERON:0000055,3.15e-16,68;UBERON:0003914,1.74e-15,117;UBERON:0007500,1.01e-14,59;UBERON:0001981,1.01e-14,59;UBERON:0004537,1.01e-14,59;UBERON:0006965,1.01e-14,59;UBERON:0002100,1.25e-14,199;UBERON:0001637,1.37e-14,42;UBERON:0003509,1.37e-14,42;UBERON:0004572,1.37e-14,42;UBERON:0000486,2.20e-14,83;UBERON:0004872,2.44e-14,83;UBERON:0004573,4.33e-14,33;UBERON:0004571,4.33e-14,33;UBERON:0005256,1.41e-13,122;UBERON:0000490,3.68e-13,148;UBERON:0007524,2.01e-12,73;UBERON:0002329,2.06e-12,71;UBERON:0003059,2.06e-12,71;UBERON:0007282,2.06e-12,71;UBERON:0004290,2.06e-12,71;UBERON:0009618,2.06e-12,71;UBERON:0007503,4.47e-12,78;UBERON:0001134,5.88e-12,62;UBERON:0002036,5.88e-12,62;UBERON:0003082,5.88e-12,62;UBERON:0003077,6.03e-12,72;UBERON:0007285,6.03e-12,72;UBERON:0002385,1.07e-11,64;UBERON:0001015,1.07e-11,64;UBERON:0000383,1.07e-11,64;UBERON:0003102,1.22e-11,99;UBERON:0000119,1.32e-09,309;UBERON:0004535,1.80e-09,109;UBERON:0000483,1.93e-09,306;UBERON:0001009,7.46e-09,112;UBERON:0002199,6.33e-08,46;UBERON:0002416,6.33e-08,46;UBERON:0004111,1.22e-07,240;UBERON:0000947,1.55e-07,21;UBERON:0010191,1.55e-07,21;UBERON:0002097,5.18e-07,41 | |||
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| ||
|short_description=p3@EXT2 | |||
}} | }} |
Latest revision as of 00:03, 18 September 2015
Short description: | p3@EXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EXT2_5end |
Coexpression cluster: | C2131_Smooth_Fibroblast_gall_leiomyoma_bone_Chondrocyte_mesenchymal |
Association with transcript: | -13bp_to_, 13bp_to_ENST00000358681, ENST00000527014_5end |
EntrezGene: | EXT2 |
HGNC: | 3513 |
UniProt: | C9JU51E9PNL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.07e-21 | 250 |
mesodermal cell | 1.46e-17 | 121 |
fibroblast | 2.70e-16 | 76 |
muscle precursor cell | 3.91e-13 | 58 |
myoblast | 3.91e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.91e-13 | 58 |
vascular associated smooth muscle cell | 3.99e-13 | 32 |
muscle cell | 3.14e-12 | 55 |
smooth muscle cell | 1.34e-11 | 43 |
smooth muscle myoblast | 1.34e-11 | 43 |
electrically responsive cell | 1.41e-10 | 61 |
electrically active cell | 1.41e-10 | 61 |