FFCP PHASE1:Hg19::chr1:164559541..164559546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000496120_5end | |association_with_transcript=-40bp_to_ENST00000496120_5end | ||
|cluster_id=chr1:164559541..164559546,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_52_at_PBX1_5end | |description=CAGE_peak_52_at_PBX1_5end | ||
|id=chr1:164559541..164559546,+ | |id=chr1:164559541..164559546,+ | ||
|ontology_enrichment_celltype=CL:0000064!3.93e-10!3;CL:0005012!3.93e-10!3;CL:0000067!3.93e-10!3;CL:0002304!3.93e-10!3;CL:0000039!2.37e-09!7;CL:0000586!2.37e-09!7;CL:0000342!2.33e-08!1;CL:0002565!2.33e-08!1;CL:0000147!4.06e-08!14;CL:0002563!6.26e-08!4 | |ontology_enrichment_celltype=CL:0000064!3.93e-10!3;CL:0005012!3.93e-10!3;CL:0000067!3.93e-10!3;CL:0002304!3.93e-10!3;CL:0000039!2.37e-09!7;CL:0000586!2.37e-09!7;CL:0000342!2.33e-08!1;CL:0002565!2.33e-08!1;CL:0000147!4.06e-08!14;CL:0002563!6.26e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;3.10e-50;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.10e-50,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.42e-195;1 | |||
|ontology_enrichment_disease=DOID:0050619!2.69e-08!1;DOID:1357!2.69e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.10e-50;4!DOID:1612;3.10e-50;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.10e-50,4;DOID:1612,3.10e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0000488!3.61e-16!4;UBERON:0003135!1.13e-15!11;UBERON:0000473!4.23e-14!8;UBERON:0002203!5.84e-11!6;UBERON:0001768!5.84e-11!6;UBERON:0003101!8.35e-11!22;UBERON:0000079!8.35e-11!22;UBERON:0006947!1.62e-10!3;UBERON:0004054!1.62e-10!3;UBERON:0007625!2.26e-10!11;UBERON:0001778!3.93e-10!3;UBERON:0001775!3.93e-10!3;UBERON:0001736!1.13e-08!1;UBERON:0006298!1.13e-08!1;UBERON:0000998!1.22e-08!1;UBERON:0006868!1.22e-08!1;UBERON:0001301!2.17e-08!1;UBERON:0002506!2.33e-08!1;UBERON:0001769!2.33e-08!1;UBERON:0001764!2.69e-08!1;UBERON:0001825!2.69e-08!1;UBERON:0002336!3.33e-08!1;UBERON:0001018!3.33e-08!1;UBERON:0002473!3.33e-08!1;UBERON:0005340!3.33e-08!1;UBERON:0002316!3.33e-08!1;UBERON:0003544!3.33e-08!1;UBERON:0001020!3.33e-08!1;UBERON:0005970!3.33e-08!1;UBERON:0002437!3.33e-08!1;UBERON:0005904!4.26e-08!4;UBERON:0003133!4.37e-08!48;UBERON:0005156!5.03e-08!59;UBERON:0000990!5.03e-08!59;UBERON:0000991!5.20e-08!21;UBERON:0009196!5.20e-08!21;UBERON:0009117!5.20e-08!21;UBERON:0005564!5.20e-08!21;UBERON:0001242!6.26e-08!4;UBERON:0001262!6.26e-08!4;UBERON:0004786!6.26e-08!4;UBERON:0004808!6.26e-08!4;UBERON:0001277!6.26e-08!4;UBERON:0004176!1.23e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.10e-50;4!UBERON:0000310;3.81e-21;10!UBERON:0001443;2.25e-19;11!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.10e-50,4;UBERON:0005333,3.10e-50,4;UBERON:0008425,3.10e-50,4;UBERON:0005311,3.10e-50,4;UBERON:0000076,5.22e-26,8;UBERON:0000310,3.81e-21,10;UBERON:0001443,2.25e-19,11;UBERON:0002365,7.41e-08,31;UBERON:0005085,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p52@PBX1 | |short_description=p52@PBX1 | ||
}} | }} |
Latest revision as of 09:16, 18 September 2015
Short description: | p52@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_PBX1_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -40bp_to_ENST00000496120_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.10e-50 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.10e-50 | 4 |
mammary bud | 3.10e-50 | 4 |
mammary ridge | 3.10e-50 | 4 |
mammary placode | 3.10e-50 | 4 |
external ectoderm | 5.22e-26 | 8 |
breast | 3.81e-21 | 10 |
chest | 2.25e-19 | 11 |
exocrine gland | 7.41e-08 | 31 |
ectodermal placode | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.10e-50 | 4 |
breast cancer | 3.10e-50 | 4 |