FFCP PHASE1:Hg19::chr1:164528445..164528459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000485769_5end | |association_with_transcript=8bp_to_ENST00000485769_5end | ||
|cluster_id=chr1:164528445..164528459,+ | |||
|coexpression_cluster_id=C2536 | |||
|description=CAGE_peak_2_at_PBX1_5end | |description=CAGE_peak_2_at_PBX1_5end | ||
|id=chr1:164528445..164528459,+ | |id=chr1:164528445..164528459,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.86e-09!180 | |ontology_enrichment_celltype=CL:0000055!2.86e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.29e-23!365;UBERON:0000481!1.33e-23!347;UBERON:0007023!9.30e-22!115;UBERON:0000924!7.29e-18!173;UBERON:0006601!7.29e-18!173;UBERON:0004121!1.06e-17!169;UBERON:0005743!1.10e-17!86;UBERON:0001017!1.85e-17!82;UBERON:0000468!2.17e-17!659;UBERON:0000033!4.06e-16!123;UBERON:0000073!4.75e-16!94;UBERON:0001016!4.75e-16!94;UBERON:0000153!1.08e-15!129;UBERON:0007811!1.08e-15!129;UBERON:0003075!1.38e-15!86;UBERON:0007284!1.38e-15!86;UBERON:0002346!1.41e-15!90;UBERON:0000477!3.36e-15!286;UBERON:0000955!9.86e-15!69;UBERON:0006238!9.86e-15!69;UBERON:0000064!3.08e-14!219;UBERON:0002616!1.36e-13!59;UBERON:0000062!1.49e-13!511;UBERON:0003056!1.87e-13!61;UBERON:0000480!4.64e-13!626;UBERON:0001049!5.10e-13!57;UBERON:0005068!5.10e-13!57;UBERON:0006241!5.10e-13!57;UBERON:0007135!5.10e-13!57;UBERON:0000467!6.21e-13!625;UBERON:0003080!3.81e-12!42;UBERON:0000119!5.49e-12!312;UBERON:0004111!5.75e-12!241;UBERON:0002780!1.04e-11!41;UBERON:0001890!1.04e-11!41;UBERON:0006240!1.04e-11!41;UBERON:0000483!1.26e-11!309;UBERON:0001869!4.26e-11!32;UBERON:0000956!4.34e-11!25;UBERON:0000203!4.34e-11!25;UBERON:0001893!1.06e-10!34;UBERON:0000922!1.14e-10!612;UBERON:0002791!2.73e-10!33;UBERON:0002020!5.61e-10!34;UBERON:0003528!5.61e-10!34;UBERON:0002619!6.62e-10!22;UBERON:0002050!8.35e-10!605;UBERON:0005423!8.35e-10!605;UBERON:0000923!1.79e-09!604;UBERON:0005291!1.79e-09!604;UBERON:0006598!1.79e-09!604;UBERON:0002532!1.79e-09!604;UBERON:0001950!2.92e-09!20;UBERON:0000025!6.05e-09!194;UBERON:0001007!3.34e-08!155;UBERON:0001555!3.34e-08!155;UBERON:0007026!3.34e-08!155;UBERON:0004921!3.62e-08!129;UBERON:0004185!3.62e-08!129;UBERON:0000063!2.53e-07!97;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169;UBERON:0003104!5.08e-07!238;UBERON:0009142!5.08e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.46e-11;25!UBERON:0000203;1.46e-11;25!UBERON:0001869;1.17e-10;32!UBERON:0002619;2.80e-10;22!UBERON:0002791;5.49e-10;32!UBERON:0001893;5.70e-10;34!UBERON:0001950;1.33e-09;20!UBERON:0003528;1.55e-09;34!UBERON:0002020;1.55e-09;34!UBERON:0002780;6.48e-09;41!UBERON:0001890;6.48e-09;41!UBERON:0000073;1.06e-07;53!UBERON:0002616;1.06e-07;53!UBERON:0004921;1.65e-07;33!UBERON:0000955;2.49e-07;68!UBERON:0001017;3.10e-07;75!UBERON:0000160;4.85e-07;17 | |||
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|phase1_expression=2.72517568905835,3.21150785836475,2.67813367782345,5.00366491765652,5.36353313312745,1.74467704820074,0,2.52687949370732,4.44015567939725,5.89761447603621,2.09340350391728,7.64544802455603,4.74780560811216,1.73272894144065,2.31978163009541,2.6893005858071,3.61616716814386,5.11217063271161,2.92759679274304,7.75662665883764,3.26401105990805,7.20945859399602,13.1668554080286,9.44433533002901,6.02604670055053,0,0,0,0.393364276848904,0,1.08371286321253,0.919421224478927,0.6024118375565,0,0,0,2.64240395401362,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,12.0726154746655,5.75381528295886,2.89151321907653,6.01605492763067,2.60723734129483,10.3387173116643,3.89307896242109,6.90104165297695,4.21285855178871,7.64162635530197,9.82343066232845,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,1.3394959242612,1.79623498100936,1.91439516821648,0,0,0.549605231791222,0,0,0.872188104285069,0,2.40597972162702,2.91300197789081,8.3182620017156,8.86670955495893,7.28880880184999,4.2699598291882,1.2333377420858,8.40269795579369,1.75123873690594,3.75962377160955,7.11379909931178,5.76175924479999,4.92075006850973,1.24864030732128,0.570471821544449,2.24173020827702,1.17434498643765,0.809364721840658,0.98315564691574,7.34955016517616,2.57952066354713,11.6758132728615,5.94001428641027,2.71993622206413,4.55080680969013,4.31170885089743,6.22843621630045,3.75355559615892,6.64953877162039,0.438977620880838,0,0.600952235626387,2.7223723958405,1.79389635688862,5.76604949810132,6.35795703478686,6.60200411385685,13.4998813302355,4.12224864073007,4.46680455195816,4.55696097051419,6.43084234063911,5.55354303337052,7.73219148595314,11.4768700341356,7.4552014428489,5.94437379543078,4.57813599238317,0,0,0,2.19552671033272,0.927708378250397,3.137236457477,4.66474747569167,3.02785021050754,1.45990943630332,7.8224766164908,3.85944562915731,1.38134921352481,4.64367928031979,3.60939740834793,3.31259040111563,3.70886318171824,5.78426471720357,4.74264082749294,3.05031221729369,4.74541238222193,3.23595139584395,4.70931516300831,3.07797725557112,0,1.40241773803446,4.115740113314,7.3504355692771,1.26755034821831,0,2.36315962672562,0,2.58275720940538,10.8087720488071,0,0,0,0.370353780634118,2.93227474779292,12.4792174233549,5.77325368101093,6.02838105870399,8.21860859650752,0.288732895522148,0,0.380508304469197,5.53143078571493,4.29243081047436,0,0,0,0,0,0.283550194484773,0.358234090811393,0.581267877027924,0.383382679165211,23.1551721811093,19.1945586148833,2.07328115540772,1.72943944100354,2.39860623510122,0.952468414382536,0,1.17217447210047,0,0.205654985406647,0,0.857479297891735,3.47606361470618,10.4630416519987,2.0534720029866,2.19761916788222,3.57656445851882,0,9.0418959638856,6.24044621468197,0.514414748524284,0,0.532844358032199,12.7250414355751,5.96883765930587,4.93944202068461,0,10.6617584622764,7.12756685640086,2.71295439353627,0.871533458600294,3.99891964728228,0,0,0,0,1.14861935834114,2.85273810081437,0.289562613335158,1.84928690295345,2.68591444859843,0,0.197030760201927,0,0,6.86055485400651,10.4111883086097,11.5993321916654,12.7312361654105,13.3967137847164,0,0,1.24324654030811,1.8403723757871,0.500170521059677,1.62759014219841,9.35868876888632,4.99601168632053,4.57337003598411,9.83987885938791,0.902838299183157,0,2.0694614258501,1.99267679560631,0.553107505625109,15.2915161463826,2.34961388955289,2.74514739048685,0.206768026122887,0,0,1.5156378572313,1.66435439510497,5.44302527993425,3.47350930946288,4.910783145218,5.89386198309454,3.20347873139252,6.65219423786715,4.18220194973379,2.96836132889982,2.46735510084249,3.37367278094941,3.36721339656617,4.67328986265259,1.85936605535935,4.3509401852984,0.802025881213139,0.552485933615378,10.4481147829792,9.46874073634929,8.65421138732199,0.902399225814824,0.231046011313244,0.784349769176855,2.92278449306521,0.633309773357254,2.27466768141793,0.680374821106063,1.51141141271498,1.54227252690289,2.43851793789468,1.00337954770971,0,0,0.223874754722178,1.09629938322967,0.522870902049801,1.53870075069834,4.92021968549559,2.92840555197873,3.40035338437484,5.67730681873729,6.27072199396469,0,0,0,1.45006077438183,1.54048617114644,1.68854042198743,0.551346289938122,1.39646318328756,1.16013355131383,0.426133137080504,1.69160867728801,0.165284915360978,1.53752053892085,0.638063562472921,0.2023155617111,1.39453664789186,4.40737285562896,9.7585217822484,4.92853728281742,2.66153015158511,12.179061889051,2.59453906745488,4.57999637574372,5.21021717103534,4.42931194606216,8.57835872657212,2.81487570442467,9.41465773674625,8.90969094192623,0,7.3747707609159,16.1976847544272,11.3099906251859,2.83055474202642,0,3.79132610615083,6.82687234725426,0.7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| ||
|short_description=p2@PBX1 | |short_description=p2@PBX1 | ||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p2@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PBX1_5end |
Coexpression cluster: | C2536_cervix_occipital_breast_parietal_uterus_smooth_temporal |
Association with transcript: | 8bp_to_ENST00000485769_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data