FFCP PHASE1:Hg19::chr11:35547572..35547588,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:35547572..35547588,-
|short_description=p3@PAMR1
|description=CAGE_peak_3_at_PAMR1_5end
|association_with_transcript=0bp_to_ENST00000378880_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25891 | |EntrezGene=25891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24554 | |HGNC=24554 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXH9 | |UniProt=Q6UXH9 | ||
|association_with_transcript=0bp_to_ENST00000378880_5end | |||
|cluster_id=chr11:35547572..35547588,- | |||
|coexpression_cluster_id=C3150 | |||
|description=CAGE_peak_3_at_PAMR1_5end | |||
|id=chr11:35547572..35547588,- | |||
|ontology_enrichment_celltype=CL:0000057!1.02e-27!75;CL:0000055!4.40e-25!180;CL:0002620!4.46e-09!23;CL:0002334!5.24e-09!12;CL:0000680!6.44e-08!57;CL:0000056!6.44e-08!57;CL:0000355!6.44e-08!57;CL:0000187!8.36e-08!54;CL:0000183!9.36e-08!59;CL:0002494!2.87e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.53e-14;73!CL:0002334;4.29e-12;12!CL:0002552;2.12e-09;5!CL:0002620;2.93e-08;23!CL:0002551;2.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-34,76;CL:0002334,3.43e-12,12;CL:0000723,7.25e-10,433;CL:0000048,7.71e-10,427;CL:0002552,2.59e-09,5;CL:0000034,2.69e-09,441;CL:0002620,1.69e-08,23;CL:0002320,3.60e-08,361;CL:0002551,8.78e-08,6;CL:0000134,6.42e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.06e-13!365;UBERON:0000914!3.48e-11!83;UBERON:0002329!3.48e-11!83;UBERON:0003077!3.48e-11!83;UBERON:0003059!3.48e-11!83;UBERON:0007282!3.48e-11!83;UBERON:0009618!3.48e-11!83;UBERON:0007285!3.48e-11!83;UBERON:0003102!1.27e-10!95;UBERON:0000477!4.81e-09!286;UBERON:0000481!1.33e-08!347;UBERON:0004290!2.31e-08!70;UBERON:0000119!2.88e-08!312;UBERON:0000483!6.51e-08!309;UBERON:0000468!8.31e-08!659;UBERON:0004111!2.66e-07!241;UBERON:0000948!4.79e-07!24;UBERON:0005498!4.79e-07!24;UBERON:0004140!4.79e-07!24;UBERON:0009881!4.79e-07!24;UBERON:0004141!4.79e-07!24;UBERON:0003084!4.79e-07!24;UBERON:0007005!4.79e-07!24;UBERON:0004139!4.79e-07!24;UBERON:0004291!4.79e-07!24;UBERON:0000486!5.27e-07!82;UBERON:0005256!6.34e-07!143;UBERON:0000033!8.75e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.00e-07;8!UBERON:0000982;6.00e-07;8!UBERON:0004770;6.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.68e-13,99;UBERON:0004923,6.16e-09,66;UBERON:0002384,1.75e-07,371;UBERON:0004905,5.96e-07,8;UBERON:0000982,5.96e-07,8;UBERON:0004770,5.96e-07,8 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,1.0007329835313,0,0,0,2.52687949370732,0.522371256399677,0.245733936501509,0,0,0,1.60896258848061,2.31978163009541,0,0,0.730310090387373,0,0,0,1.25381888591235,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.04841031644363,2.68511379871414,0.361439152384566,0.50133791063589,1.73815822752988,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,3.4409383804245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,4.10468460520978,2.0078563452417,2.12801029319014,0.560677600142307,0,0.24666754841716,10.8923862389918,0.269421344139376,1.30769522490767,1.21085942115945,0,5.62371436401112,12.4864030732128,4.56377457235559,2.69007624993242,1.76151747965647,1.94247533241758,0.561803226808994,8.16616685019573,2.21101771161182,9.50597186817042,1.18800285728205,2.71993622206413,4.55080680969013,2.15585442544872,2.35670559535693,2.50237039743928,4.71008996323111,0,3.37136575378922,0.901428353439581,0.340296549480063,0.89694817844431,1.2813443329114,0.211931901159562,1.80054657650641,1.64884046781502,0,0.37223371266318,4.55696097051419,1.07180705677318,0.504867548488229,0.460249493211497,2.42469085228218,0,0.302256294682921,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0.265059536642971,0.580969714347592,0.518305275076852,0.504641701751257,0,0,0,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,0.514703430895577,0.219500570817251,1.1240175325762,0,0,2.28065813717227,3.11980435583874,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0.285826432630578,0.784917590417525,1.74384027533312,0,0.387815147273333,0,0,11.9672152463192,16.6411899058186,0.514414748524284,0,0.266422179016099,0,0,0,0.65147236858747,0,0.791951872933429,1.80863626235752,0,0.99972991182057,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,1.62759014219841,0.831883446123229,0.535286966391485,0.946214490203608,0.585707074963566,0.300946099727719,2.27407504055985,0,0.664225598535437,0,6.0818530127658,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.744323423456331,1.38115775959256,3.92924132206303,1.28139149255701,1.53512174720011,1.44768529029247,1.48418066444991,2.31314540703983,0.887808626565635,2.13530605635904,4.67328986265259,1.51073491997947,0,0.40101294060657,0.552485933615378,2.87036120411517,2.54927635209404,1.83574180943194,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,3.21367859688319,7.54031602678551,0.462145851343933,0.921022048356777,0,1.07420244868274,0.145016693914229,0.511359764496605,0.267096106940212,0.330569830721956,0.960950336825531,1.02090169995667,0.910420027699949,3.253918845081,7.24068397710472,0,0,1.06461206063404,1.73986598415015,0,0,0,0.949138274156178,0.953150969619124,0,0.42793898803392,22.5924306027415,0.78494864019923,0.899362287916574,0.823611089208164,0.353437207037059,0.404364963146632,0,0.842516912477962,0,0.974853958525138,0,9.14549406433505,3.25232493493539,18.0812986592388,2.2054613741845,1.32687795048244,0.438450885253763,0,0,0,0,0.281695602532241,0.286822704408103,0.294747123039363,0,4.61189383291777,4.01104507065562,1.64647446479951,1.89736586882858,4.19921664293979,0.384888450902048,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,1.93866549219044,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,1.80894657938112,0,0.331737779793674,0,0.438770794307945,0,0,0.923403102045565,0,0,0,0,1.91400695839152,5.67905079091546,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,1.07841812769083,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0.720599767084807,2.32991899054908,0,0,0,0,0,0,1.0896272488926,0.160753148465019,0,0,0,0.77380195455795,0.668245123238271,0,0.236417121897595,0.367182116944987,0,0,0.767660789277781,0,0,0,0,0.864221491201268,1.30634944043764,0,0,0,0,0.146552233678082,0,1.16354660725395,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.976210119215705,0.625954653532499,1.14681839138014,0.99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| ||
|short_description=p3@PAMR1 | |||
}} | }} |
Latest revision as of 20:52, 17 September 2015
Short description: | p3@PAMR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAMR1_5end |
Coexpression cluster: | C3150_mesenchymal_Smooth_Mesenchymal_Fibroblast_Prostate_Anulus_Trabecular |
Association with transcript: | 0bp_to_ENST00000378880_5end |
EntrezGene: | PAMR1 |
HGNC: | 24554 |
UniProt: | Q6UXH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-34 | 76 |
preadipocyte | 3.43e-12 | 12 |
somatic stem cell | 7.25e-10 | 433 |
multi fate stem cell | 7.71e-10 | 427 |
fibroblast of gingiva | 2.59e-09 | 5 |
stem cell | 2.69e-09 | 441 |
skin fibroblast | 1.69e-08 | 23 |
connective tissue cell | 3.60e-08 | 361 |
fibroblast of dermis | 8.78e-08 | 6 |
mesenchymal cell | 6.42e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.68e-13 | 99 |
organ component layer | 6.16e-09 | 66 |
connective tissue | 1.75e-07 | 371 |
articulation | 5.96e-07 | 8 |
skeletal joint | 5.96e-07 | 8 |
articular system | 5.96e-07 | 8 |