FFCP PHASE1:Hg19::chr15:39888814..39888825,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888814..39888825,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888814..39888825,+ | |description=CAGE_peak_at_chr15:39888814..39888825,+ | ||
|id=chr15:39888814..39888825,+ | |id=chr15:39888814..39888825,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.22e-17!591;CL:0000055!4.90e-17!180;CL:0000144!8.63e-15!625;CL:0000057!2.30e-14!75;CL:0000012!6.73e-12!682;CL:0000548!7.42e-12!679;CL:0000004!7.42e-12!679;CL:0000255!7.42e-12!679;CL:0000220!9.77e-11!246;CL:0002321!2.19e-10!248;CL:0000222!3.96e-10!119;CL:0000359!3.98e-09!32;CL:0002139!6.70e-09!24;CL:0000680!2.41e-08!57;CL:0000056!2.41e-08!57;CL:0000355!2.41e-08!57;CL:0002334!3.53e-08!12;CL:0000187!1.02e-07!54;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:0000723!1.58e-07!436;CL:0000048!2.69e-07!430;CL:0000034!3.55e-07!444;CL:0000003!4.61e-07!722 | |ontology_enrichment_celltype=CL:0002371!1.22e-17!591;CL:0000055!4.90e-17!180;CL:0000144!8.63e-15!625;CL:0000057!2.30e-14!75;CL:0000012!6.73e-12!682;CL:0000548!7.42e-12!679;CL:0000004!7.42e-12!679;CL:0000255!7.42e-12!679;CL:0000220!9.77e-11!246;CL:0002321!2.19e-10!248;CL:0000222!3.96e-10!119;CL:0000359!3.98e-09!32;CL:0002139!6.70e-09!24;CL:0000680!2.41e-08!57;CL:0000056!2.41e-08!57;CL:0000355!2.41e-08!57;CL:0002334!3.53e-08!12;CL:0000187!1.02e-07!54;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:0000723!1.58e-07!436;CL:0000048!2.69e-07!430;CL:0000034!3.55e-07!444;CL:0000003!4.61e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.63e-11;24!CL:0002559;1.30e-09;5!CL:0000115;7.08e-08;36!CL:0002334;9.08e-08;12!CL:0002138;1.09e-07;6!CL:0002580;1.43e-07;3!CL:0002579;7.75e-07;3!CL:0000136;9.00e-07;13!CL:0000346;9.88e-07;3!CL:1000428;9.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.49e-13,76;CL:0002139,5.82e-11,24;CL:0002559,1.66e-09,5;CL:0000115,1.13e-08,36;CL:0002334,6.79e-08,12;CL:0002580,1.35e-07,3;CL:0005020,1.46e-07,6;CL:0002138,1.46e-07,6;CL:0005022,1.46e-07,6;CL:0000136,4.34e-07,15;CL:0002579,6.41e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;1.09e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.34e-14!69;UBERON:0002049!7.54e-14!79;UBERON:0007798!7.54e-14!79;UBERON:0001981!1.75e-12!60;UBERON:0007500!1.75e-12!60;UBERON:0004537!1.75e-12!60;UBERON:0006965!1.75e-12!60;UBERON:0001637!2.61e-12!42;UBERON:0003509!2.61e-12!42;UBERON:0004572!2.61e-12!42;UBERON:0004872!4.54e-12!84;UBERON:0004535!4.74e-11!110;UBERON:0001009!1.21e-10!113;UBERON:0000468!1.62e-09!659;UBERON:0000914!1.65e-09!83;UBERON:0002329!1.65e-09!83;UBERON:0003077!1.65e-09!83;UBERON:0003059!1.65e-09!83;UBERON:0007282!1.65e-09!83;UBERON:0009618!1.65e-09!83;UBERON:0007285!1.65e-09!83;UBERON:0004573!2.13e-09!33;UBERON:0004571!2.13e-09!33;UBERON:0000486!2.92e-09!82;UBERON:0003914!1.58e-08!118;UBERON:0000467!1.86e-08!625;UBERON:0000480!2.44e-08!626;UBERON:0000490!6.33e-08!138;UBERON:0000947!1.28e-07!21;UBERON:0010191!1.28e-07!21;UBERON:0001134!1.95e-07!61;UBERON:0002036!1.95e-07!61;UBERON:0003082!1.95e-07!61;UBERON:0004290!1.98e-07!70;UBERON:0003102!3.67e-07!95;UBERON:0002199!5.32e-07!45;UBERON:0002416!5.32e-07!45;UBERON:0002385!7.66e-07!63;UBERON:0001015!7.66e-07!63;UBERON:0000383!7.66e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.62e-12;6!UBERON:0002358;8.62e-12;6!UBERON:0003684;8.62e-12;6!UBERON:0001178;8.62e-12;6!UBERON:0002073;1.30e-09;5!UBERON:0004457;1.51e-07;9!UBERON:0000042;1.51e-07;9!UBERON:0001637;1.62e-07;42!UBERON:0003509;1.62e-07;42!UBERON:0004572;1.62e-07;42!UBERON:0004573;3.68e-07;33!UBERON:0004571;3.68e-07;33!UBERON:0000310;3.81e-07;10!UBERON:0000947;6.81e-07;21!UBERON:0010191;6.81e-07;21!UBERON:0000412;9.88e-07;3!UBERON:0001992;9.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.08e-11,6;UBERON:0002358,1.08e-11,6;UBERON:0003684,1.08e-11,6;UBERON:0001178,1.08e-11,6;UBERON:0000055,1.30e-11,68;UBERON:0002073,1.66e-09,5;UBERON:0005086,1.66e-09,5;UBERON:0002049,3.03e-09,78;UBERON:0007798,3.03e-09,78;UBERON:0001637,3.24e-09,42;UBERON:0003509,3.24e-09,42;UBERON:0004572,3.24e-09,42;UBERON:0007500,1.17e-08,59;UBERON:0001981,1.17e-08,59;UBERON:0004537,1.17e-08,59;UBERON:0006965,1.17e-08,59;UBERON:0004573,1.79e-07,33;UBERON:0004571,1.79e-07,33;UBERON:0000310,3.38e-07,10;UBERON:0000947,6.01e-07,21;UBERON:0010191,6.01e-07,21;UBERON:0002097,9.42e-07,41 | |||
|phase1_expression=4.54195948176392,5.99481466894753,2.25527046553554,3.00219895059391,2.23480547213644,3.48935409640147,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0.247532705920093,0.331397375727916,2.6893005858071,3.61616716814386,2.19093027116212,2.92759679274304,0,0,0.626909442956176,0,0,0.251085279189606,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0.739508020333575,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0,0,2.55671940596253,0,0,2.01384674625505,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0,1.83650335422542,0,0,0.329851300186716,0,0,3.19230162491442,0,0,2.76373531782418,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0.361439152384566,1.50401373190767,0.579386075843295,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0.79504962946682,0,1.04142150482278,0.56530794192401,1.25849830862972,1.6507082516404,0.417989933073621,1.55050055501597,0.35576626268671,1.33888245105868,0.402829317109147,1.52054421143703,1.95249646038536,1.47065232138347,4.86085168729056,1.16089646769304,0.44905874525234,0,0,0,1.46561395144326,0,0,0.436094052142534,9.44246708221105,3.41902381494365,1.58891016975863,0.573673241497627,0.354668382198357,0,2.1349799145941,4.19334832309172,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0.816616685019573,0.245668634623536,0.206651562351531,2.37600571456411,3.95627086845691,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,2.45190236639216,2.40380894250555,1.70148274740032,3.40840307808838,7.26095121983129,3.39091041855299,0.900273288253207,0.515262646192195,2.31876486041066,2.04728541964749,2.36286865137773,0.779496041289589,0.757301322732344,2.85354685791128,0.646584227275248,1.42003837006646,0.906768884048762,1.01736355386293,0.193260853163297,1.63647672354501,0.286804595389004,0,0,0,0,0.252320850875628,0,4.69348596989448,6.43240938192885,1.38134921352481,2.3218396401599,1.44375896333917,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.71181185733329,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.603173834469785,0.925884451585296,0,0,0,0,0.117408694235822,1.29929802984966,5.09284063834272,5.13686211033415,1.58040879591855,0,0,0,0,1.87467667973554,2.35174979478403,0.708875486211932,1.34337784054272,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,1.59562869950922,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,4.57535895367776,6.60187258549499,5.99269177128952,4.68565659970853,0.300946099727719,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,5.70647957983187,7.82656063769118,7.57782254969299,2.43464383585832,2.55853624533352,10.7772127166217,2.96836132889982,0.616838775210622,0.710246901252508,0.0821271560138091,0.519254429183621,0.232420756919918,0,1.60405176242628,0.0920809889358963,1.14814448164607,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0.340187410553031,2.80690690932781,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0.308097234229289,0,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0.661139661443912,0.960950336825531,1.53135254993501,0,0.929691098594572,1.5740617341532,0,0.308033580176089,0,0.869932992075073,1.11194531462352,0.286249773483982,0.744316738719335,0.949138274156178,0.38126038784765,0,0,0,1.56989728039846,0.719489830333259,0,0.235624804691373,0.808729926293264,1.58510321173008,0.421258456238981,0,0.243713489631284,2.11300293513511,0,0.848432591722276,0,0,0,0.438450885253763,0,0.655894752046633,0.608731130888112,2.16876448669825,0.281695602532241,0.430234056612155,0.687743287091848,0.7133421029625,0,0.633322905892992,0,0,0,0.48111056362756,0,0,0.0941438007767792,1.72202149068492,1.68471475667626,0.443430153536676,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,2.14870036263921,0.593929361665277,6.45037474408387,0,0,0,0,0,0,0,0,0.20453736500431,0,2.48831670129446,0.718946809178615,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0,0.341826167541004,0,0,0,0.31900115973192,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0.087059206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| ||
|short_description=p@chr15:39888814..39888825,+ | |short_description=p@chr15:39888814..39888825,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888814..39888825, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888814..39888825, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.49e-13 | 76 |
endothelial cell of vascular tree | 5.82e-11 | 24 |
hair follicle cell | 1.66e-09 | 5 |
endothelial cell | 1.13e-08 | 36 |
preadipocyte | 6.79e-08 | 12 |
preadipocyte of the breast | 1.35e-07 | 3 |
lymphangioblast | 1.46e-07 | 6 |
endothelial cell of lymphatic vessel | 1.46e-07 | 6 |
vascular lymphangioblast | 1.46e-07 | 6 |
fat cell | 4.34e-07 | 15 |
omentum preadipocyte | 6.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.08e-11 | 6 |
peritoneum | 1.08e-11 | 6 |
abdominal cavity | 1.08e-11 | 6 |
visceral peritoneum | 1.08e-11 | 6 |
vessel | 1.30e-11 | 68 |
hair follicle | 1.66e-09 | 5 |
hair follicle placode | 1.66e-09 | 5 |
vasculature | 3.03e-09 | 78 |
vascular system | 3.03e-09 | 78 |
artery | 3.24e-09 | 42 |
arterial blood vessel | 3.24e-09 | 42 |
arterial system | 3.24e-09 | 42 |
epithelial tube open at both ends | 1.17e-08 | 59 |
blood vessel | 1.17e-08 | 59 |
blood vasculature | 1.17e-08 | 59 |
vascular cord | 1.17e-08 | 59 |
systemic artery | 1.79e-07 | 33 |
systemic arterial system | 1.79e-07 | 33 |
breast | 3.38e-07 | 10 |
aorta | 6.01e-07 | 21 |
aortic system | 6.01e-07 | 21 |
skin of body | 9.42e-07 | 41 |