FFCP PHASE1:Hg19::chr15:39888716..39888727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888716..39888727,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39888716..39888727,+ | |description=CAGE_peak_at_chr15:39888716..39888727,+ | ||
|id=chr15:39888716..39888727,+ | |id=chr15:39888716..39888727,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.81e-12!75;CL:0000055!5.66e-12!180;CL:0000222!7.50e-11!119;CL:0002139!1.68e-10!24;CL:0002371!1.89e-10!591;CL:0000115!1.02e-09!35;CL:0000548!3.70e-08!679;CL:0000004!3.70e-08!679;CL:0000255!3.70e-08!679;CL:0000144!4.03e-08!625;CL:0002078!5.26e-08!44;CL:0000220!5.61e-08!246;CL:0000012!8.63e-08!682;CL:0002321!1.11e-07!248;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18 | |ontology_enrichment_celltype=CL:0000057!1.81e-12!75;CL:0000055!5.66e-12!180;CL:0000222!7.50e-11!119;CL:0002139!1.68e-10!24;CL:0002371!1.89e-10!591;CL:0000115!1.02e-09!35;CL:0000548!3.70e-08!679;CL:0000004!3.70e-08!679;CL:0000255!3.70e-08!679;CL:0000144!4.03e-08!625;CL:0002078!5.26e-08!44;CL:0000220!5.61e-08!246;CL:0000012!8.63e-08!682;CL:0002321!1.11e-07!248;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.31e-16;24!CL:0000115;5.39e-13;36!CL:0000071;1.78e-12;18!CL:0002544;2.95e-08;6!CL:0002078;3.01e-08;45!CL:0000244;8.34e-08;4!CL:0000731;8.34e-08;4!CL:0002543;9.85e-08;6!CL:1000413;3.17e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.49e-16,24;CL:0000115,3.14e-15,36;CL:0002078,1.64e-12,45;CL:0000071,1.85e-12,18;CL:0002546,1.85e-12,18;CL:0000057,4.70e-09,76;CL:0002544,2.23e-08,6;CL:0000244,5.59e-08,4;CL:0000731,5.59e-08,4;CL:0000222,1.01e-07,121;CL:0002543,1.57e-07,6;CL:0000213,1.97e-07,58;CL:0000215,1.97e-07,58;CL:1000413,2.48e-07,9;CL:0002580,9.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.78e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.56e-13!69;UBERON:0002049!8.90e-13!79;UBERON:0007798!8.90e-13!79;UBERON:0001981!1.22e-11!60;UBERON:0007500!1.22e-11!60;UBERON:0004537!1.22e-11!60;UBERON:0006965!1.22e-11!60;UBERON:0003914!1.90e-11!118;UBERON:0004872!6.09e-11!84;UBERON:0004535!1.88e-10!110;UBERON:0000467!2.19e-10!625;UBERON:0000480!2.99e-10!626;UBERON:0000468!4.61e-10!659;UBERON:0001009!1.24e-09!113;UBERON:0000490!4.17e-09!138;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0002100!4.53e-07!216 | |ontology_enrichment_uberon=UBERON:0000055!3.56e-13!69;UBERON:0002049!8.90e-13!79;UBERON:0007798!8.90e-13!79;UBERON:0001981!1.22e-11!60;UBERON:0007500!1.22e-11!60;UBERON:0004537!1.22e-11!60;UBERON:0006965!1.22e-11!60;UBERON:0003914!1.90e-11!118;UBERON:0004872!6.09e-11!84;UBERON:0004535!1.88e-10!110;UBERON:0000467!2.19e-10!625;UBERON:0000480!2.99e-10!626;UBERON:0000468!4.61e-10!659;UBERON:0001009!1.24e-09!113;UBERON:0000490!4.17e-09!138;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0002100!4.53e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.78e-12;18!UBERON:0001986;1.78e-12;18!UBERON:0004852;1.78e-12;18!UBERON:0000305;1.09e-09;7!UBERON:0000487;1.18e-09;22!UBERON:0005631;9.13e-09;10!UBERON:0000158;9.13e-09;10!UBERON:0006914;3.82e-08;25!UBERON:0003915;3.17e-07;9!UBERON:0004700;3.17e-07;9!UBERON:0001917;3.17e-07;9!UBERON:0000490;8.59e-07;33!UBERON:0000055;9.46e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.85e-12,18;UBERON:0001986,1.85e-12,18;UBERON:0004852,1.85e-12,18;UBERON:0000055,9.47e-11,68;UBERON:0000487,1.21e-09,22;UBERON:0000305,1.41e-09,7;UBERON:0002049,2.45e-09,78;UBERON:0007798,2.45e-09,78;UBERON:0007500,7.15e-09,59;UBERON:0001981,7.15e-09,59;UBERON:0004537,7.15e-09,59;UBERON:0006965,7.15e-09,59;UBERON:0004871,2.91e-08,8;UBERON:0006914,3.90e-08,25;UBERON:0005631,2.27e-07,14;UBERON:0000158,2.27e-07,14;UBERON:0003915,2.48e-07,9;UBERON:0004700,2.48e-07,9;UBERON:0001917,2.48e-07,9;UBERON:0003914,5.72e-07,117 | |||
|phase1_expression=1.2717486548939,1.49870366723688,0.986680828671798,4.00293193412522,0.446961094427288,1.74467704820074,0,0,0,0.982935746006035,0.697801167972428,2.62129646556207,2.63766978228454,0.123766352960047,0.331397375727916,2.01697543935533,0,0.730310090387373,3.41552959153355,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0.383829398097213,0.464448369948228,1.83884244895785,0.6024118375565,0,0,0,0,0.553995408531877,1.60435557976113,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,2.32429036905685,0,0,2.8769239232215,0.256160706529101,0.236482229888585,1.72372840368309,0,0,1.12945403725563,0,0,2.14258724659632,2.56743221660875,0.639337125799041,1.31940520074686,0,0,2.32167390902867,0,0,0.502497330513487,0.521482918420201,0,0,1.84138817993782,0,0,0,0,0.336985893439485,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,2.18638648103376,0,4.51282652089873,3.95715559346807,0.838998872419812,0,1.46296476575767,2.06733407335463,0.71153252537342,3.68192674041137,0,1.52054421143703,0.732186172644509,3.67663080345869,1.62028389576352,2.05389375053383,1.12264686313085,2.70267553159973,4.5994991239765,0,1.28241220751285,0,0,0.872188104285069,7.45457927542978,0.379891534993739,0.264818361626438,0.573673241497627,0.354668382198357,0.560677600142307,2.1349799145941,1.2333377420858,0,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,1.22492502752936,0.122834317311768,0.516628905878827,5.94001428641027,4.45080472701402,0,0,0,0,0.277064115484183,1.75591048352335,5.82326812018137,7.51190294532984,0.680593098960126,2.69084453533293,0.640672166455702,0.847727604638247,0.600182192168805,1.75189299705346,1.03056216018252,0.744467425326359,1.68776332241266,0.389748020644795,1.26216887122057,1.10459878370759,0.323292113637624,1.42003837006646,0.503760491138201,0.508681776931463,0.386521706326594,0.545492241181669,0.860413786167011,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,1.4763109092493,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.721832238805369,1.85194205030644,1.14152491340759,0,0,0,0,0,0,0.839910640994298,0.283550194484773,1.07470227243418,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,0,2.08014873822732,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.44781306667579,0.821905290201534,1.25342674267927,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,4.15941723061614,4.81758269752337,3.46945313074656,3.04567678981054,0.902838299183157,0,0,0,0.737476674166813,0.347534457872331,0,0,0.413536052245775,0.215714200818617,0.106727557803444,1.21251028578504,0,0,1.73675465473144,6.59886485138669,2.80660094433074,0.768834895534206,2.55853624533352,2.73451665944133,1.48418066444991,0.462629081407967,0,0,0,0.116210378459959,0,1.00253235151642,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,2.27466768141793,1.19065593693561,0.215915916102139,3.08454505380579,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0.308097234229289,0.307007349452259,0.551346289938122,0.429680979473094,0.435050081742686,0.170453254832202,0,0,1.72971060628596,2.67986696238627,0.10115778085555,0,1.25924938732256,0,0,0,0,0.74129687641568,0.286249773483982,0.372158369359667,1.2655176988749,0,0.255897791311334,0.42793898803392,0.318203247925937,1.56989728039846,1.61885211824983,0.274537029736055,0.235624804691373,0.606547444719948,0,1.26377536871694,0,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0.655894752046633,1.82619339266434,1.54911749049875,0.845086807596724,0,0.294747123039363,1.426684205925,0,0.422215270595328,0,0,0,0.48111056362756,0,0,0.0941438007767792,3.01353760869861,1.68471475667626,3.10401107475673,1.60806380144872,0,0,0,0,0,0,0,0.79312517629427,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,1.18785872333055,12.9007494881677,0,0.140669416410513,0,0,0,0,0,0,0.306806047506464,0,1.86623752597084,1.79736702294654,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0,0.455768223388005,0,0,0,0.31900115973192,2.38153742844842,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0.193978032976839,0,0.225980740780532,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| ||
|short_description=p@chr15:39888716..39888727,+ | |short_description=p@chr15:39888716..39888727,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888716..39888727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888716..39888727, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.49e-16 | 24 |
endothelial cell | 3.14e-15 | 36 |
meso-epithelial cell | 1.64e-12 | 45 |
blood vessel endothelial cell | 1.85e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.85e-12 | 18 |
fibroblast | 4.70e-09 | 76 |
aortic endothelial cell | 2.23e-08 | 6 |
transitional epithelial cell | 5.59e-08 | 4 |
urothelial cell | 5.59e-08 | 4 |
mesodermal cell | 1.01e-07 | 121 |
vein endothelial cell | 1.57e-07 | 6 |
lining cell | 1.97e-07 | 58 |
barrier cell | 1.97e-07 | 58 |
endothelial cell of artery | 2.48e-07 | 9 |
preadipocyte of the breast | 9.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.85e-12 | 18 |
endothelium | 1.85e-12 | 18 |
cardiovascular system endothelium | 1.85e-12 | 18 |
vessel | 9.47e-11 | 68 |
simple squamous epithelium | 1.21e-09 | 22 |
amnion | 1.41e-09 | 7 |
vasculature | 2.45e-09 | 78 |
vascular system | 2.45e-09 | 78 |
epithelial tube open at both ends | 7.15e-09 | 59 |
blood vessel | 7.15e-09 | 59 |
blood vasculature | 7.15e-09 | 59 |
vascular cord | 7.15e-09 | 59 |
somatic layer of lateral plate mesoderm | 2.91e-08 | 8 |
squamous epithelium | 3.90e-08 | 25 |
extraembryonic membrane | 2.27e-07 | 14 |
membranous layer | 2.27e-07 | 14 |
endothelial tube | 2.48e-07 | 9 |
arterial system endothelium | 2.48e-07 | 9 |
endothelium of artery | 2.48e-07 | 9 |
epithelial tube | 5.72e-07 | 117 |