FFCP PHASE1:Hg19::chr15:29287721..29287737,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=strong | |||
|UniProt=Q59G28 | |UniProt=Q59G28 | ||
|association_with_transcript=-234bp_to_AB209281_5end | |association_with_transcript=-234bp_to_AB209281_5end | ||
|cluster_id=chr15:29287721..29287737,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_8_at_APBA2_5end | |description=CAGE_peak_8_at_APBA2_5end | ||
|id=chr15:29287721..29287737,+ | |id=chr15:29287721..29287737,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.33e-13;82!UBERON:0006241;1.53e-11;3!UBERON:0003057;1.53e-11;3!UBERON:0005425;2.13e-09;1!UBERON:0006222;9.17e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-96!57;UBERON:0005068!4.25e-96!57;UBERON:0006241!4.25e-96!57;UBERON:0007135!4.25e-96!57;UBERON:0002616!4.81e-78!59;UBERON:0001017!9.46e-78!82;UBERON:0005743!9.19e-74!86;UBERON:0000955!1.96e-72!69;UBERON:0006238!1.96e-72!69;UBERON:0002020!8.85e-72!34;UBERON:0003528!8.85e-72!34;UBERON:0001893!1.08e-71!34;UBERON:0000073!1.54e-69!94;UBERON:0001016!1.54e-69!94;UBERON:0002780!1.61e-68!41;UBERON:0001890!1.61e-68!41;UBERON:0006240!1.61e-68!41;UBERON:0002791!2.32e-68!33;UBERON:0003080!9.45e-67!42;UBERON:0001869!1.78e-64!32;UBERON:0003075!4.39e-64!86;UBERON:0007284!4.39e-64!86;UBERON:0002346!7.65e-61!90;UBERON:0007023!2.69e-54!115;UBERON:0002619!3.50e-54!22;UBERON:0000956!2.31e-47!25;UBERON:0000203!2.31e-47!25;UBERON:0001950!2.81e-47!20;UBERON:0003056!5.33e-44!61;UBERON:0000033!2.77e-39!123;UBERON:0000153!4.75e-37!129;UBERON:0007811!4.75e-37!129;UBERON:0004121!8.63e-35!169;UBERON:0000924!9.08e-34!173;UBERON:0006601!9.08e-34!173;UBERON:0003076!4.26e-29!15;UBERON:0003057!4.26e-29!15;UBERON:0002308!5.49e-26!9;UBERON:0000125!5.49e-26!9;UBERON:0002420!1.43e-25!9;UBERON:0007245!1.43e-25!9;UBERON:0010009!1.43e-25!9;UBERON:0010011!1.43e-25!9;UBERON:0000454!1.43e-25!9;UBERON:0002298!7.36e-24!8;UBERON:0000025!2.90e-23!194;UBERON:0004732!1.08e-22!13;UBERON:0004733!2.07e-19!12;UBERON:0002028!2.07e-19!12;UBERON:0007277!2.07e-19!12;UBERON:0000349!5.54e-19!5;UBERON:0009663!6.95e-19!7;UBERON:0001872!2.10e-18!5;UBERON:0004111!7.01e-17!241;UBERON:0001871!1.77e-16!7;UBERON:0000200!1.15e-15!6;UBERON:0000477!1.36e-14!286;UBERON:0000064!1.41e-14!219;UBERON:0006331!7.82e-13!3;UBERON:0001896!9.87e-13!3;UBERON:0005290!9.87e-13!3;UBERON:0010096!9.87e-13!3;UBERON:0000988!1.24e-12!3;UBERON:0002240!1.83e-12!3;UBERON:0002021!1.91e-12!5;UBERON:0002771!4.21e-12!3;UBERON:0000483!6.64e-12!309;UBERON:0000119!1.07e-11!312;UBERON:0002680!2.49e-10!9;UBERON:0001895!2.49e-10!9;UBERON:0010092!2.49e-10!9;UBERON:0000475!4.35e-10!365;UBERON:0005162!3.06e-09!2;UBERON:0000122!3.06e-09!2;UBERON:0002148!5.30e-09!2;UBERON:0009662!5.30e-09!2;UBERON:0001954!8.42e-09!2;UBERON:0003022!8.42e-09!2;UBERON:0002421!8.42e-09!2;UBERON:0002600!8.42e-09!2;UBERON:0000369!9.66e-09!4;UBERON:0002435!9.66e-09!4;UBERON:0000204!9.66e-09!4;UBERON:0010082!9.66e-09!4;UBERON:0001875!1.49e-08!2;UBERON:0006514!1.49e-08!2;UBERON:0001876!1.61e-08!2;UBERON:0005174!1.24e-07!5;UBERON:0001137!1.24e-07!5;UBERON:0000062!4.71e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.96e-46;6!UBERON:0000073;3.71e-39;53!UBERON:0002616;3.71e-39;53!UBERON:0002780;1.73e-35;41!UBERON:0001890;1.73e-35;41!UBERON:0001893;2.64e-32;34!UBERON:0002619;3.82e-31;22!UBERON:0004732;1.17e-28;13!UBERON:0003528;1.80e-28;34!UBERON:0002020;1.80e-28;34!UBERON:0002791;7.70e-28;32!UBERON:0000956;2.24e-27;25!UBERON:0000203;2.24e-27;25!UBERON:0001869;9.56e-27;32!UBERON:0001896;4.95e-24;3!UBERON:0005290;4.95e-24;3!UBERON:0000988;6.50e-24;3!UBERON:0004733;6.86e-23;12!UBERON:0002028;6.86e-23;12!UBERON:0001950;7.38e-22;20!UBERON:0001017;8.47e-19;75!UBERON:0000955;2.07e-17;68!UBERON:0005162;4.53e-17;2!UBERON:0000122;4.53e-17;2!UBERON:0002148;1.22e-16;2!UBERON:0006331;1.22e-16;2!UBERON:0009662;1.22e-16;2!UBERON:0001954;2.37e-16;2!UBERON:0003022;2.37e-16;2!UBERON:0002421;2.37e-16;2!UBERON:0002600;2.37e-16;2!UBERON:0001016;5.21e-16;83!UBERON:0000125;2.67e-14;9!UBERON:0002308;2.67e-14;9!UBERON:0000349;2.90e-14;5!UBERON:0002021;3.18e-14;5!UBERON:0007023;1.63e-12;114!UBERON:0000200;5.57e-12;6!UBERON:0002240;1.53e-11;3!UBERON:0005174;1.53e-11;3!UBERON:0001137;1.53e-11;3!UBERON:0002038;1.60e-09;1!UBERON:0009661;1.60e-09;1!UBERON:0002950;1.60e-09;1!UBERON:0001891;1.60e-09;1!UBERON:0002336;2.13e-09;1!UBERON:0000941;2.13e-09;1!UBERON:0001785;2.13e-09;1!UBERON:0002464;2.13e-09;1!UBERON:0004904;2.13e-09;1!UBERON:0011215;2.13e-09;1!UBERON:0001018;2.13e-09;1!UBERON:0001021;2.13e-09;1!UBERON:0002473;2.13e-09;1!UBERON:0005340;2.13e-09;1!UBERON:0003544;2.13e-09;1!UBERON:0005970;2.13e-09;1!UBERON:0002316;2.13e-09;1!UBERON:0001020;2.13e-09;1!UBERON:0002437;2.13e-09;1!UBERON:0007190;9.17e-09;1!UBERON:0002420;2.26e-08;9!UBERON:0007245;2.26e-08;9!UBERON:0010009;2.26e-08;9!UBERON:0010011;2.26e-08;9!UBERON:0000454;2.26e-08;9!UBERON:0002680;2.47e-08;9!UBERON:0001895;2.47e-08;9!UBERON:0011216;4.41e-07;132!UBERON:0001872;7.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.25e-73,56;UBERON:0005068,1.25e-73,56;UBERON:0006241,1.25e-73,56;UBERON:0007135,1.25e-73,56;UBERON:0000073,7.95e-65,53;UBERON:0002616,7.95e-65,53;UBERON:0000955,4.47e-54,68;UBERON:0006238,4.47e-54,68;UBERON:0003075,5.34e-54,82;UBERON:0007284,5.34e-54,82;UBERON:0001017,6.16e-54,81;UBERON:0001016,1.29e-52,89;UBERON:0002346,2.41e-51,86;UBERON:0002298,3.02e-46,6;UBERON:0002780,1.99e-43,41;UBERON:0001890,1.99e-43,41;UBERON:0003080,1.99e-43,41;UBERON:0006240,1.99e-43,41;UBERON:0010371,6.73e-42,104;UBERON:0003528,5.13e-40,34;UBERON:0002020,5.13e-40,34;UBERON:0001893,6.35e-40,34;UBERON:0007023,2.41e-38,114;UBERON:0003056,1.80e-32,61;UBERON:0003076,2.80e-32,15;UBERON:0003057,2.80e-32,15;UBERON:0010314,2.84e-32,132;UBERON:0002619,4.96e-31,22;UBERON:0002791,5.61e-31,32;UBERON:0001869,1.11e-30,32;UBERON:0004732,1.04e-28,13;UBERON:0000956,2.82e-27,25;UBERON:0000203,2.82e-27,25;UBERON:0004121,5.18e-26,171;UBERON:0000924,5.18e-26,171;UBERON:0006601,5.18e-26,171;UBERON:0001896,3.91e-24,3;UBERON:0005290,3.91e-24,3;UBERON:0010096,3.91e-24,3;UBERON:0000988,6.26e-24,3;UBERON:0004733,6.00e-23,12;UBERON:0002028,6.00e-23,12;UBERON:0007277,6.00e-23,12;UBERON:0001950,8.05e-22,20;UBERON:0000025,4.64e-19,192;UBERON:0011216,5.18e-19,223;UBERON:0005162,4.54e-17,2;UBERON:0000122,4.54e-17,2;UBERON:0002148,1.37e-16,2;UBERON:0006331,1.37e-16,2;UBERON:0009662,1.37e-16,2;UBERON:0001954,3.49e-16,2;UBERON:0003022,3.49e-16,2;UBERON:0002421,3.49e-16,2;UBERON:0002600,3.49e-16,2;UBERON:0004111,1.81e-14,240;UBERON:0000125,2.81e-14,9;UBERON:0002308,2.81e-14,9;UBERON:0002021,3.18e-14,5;UBERON:0000349,3.99e-14,5;UBERON:0000200,6.74e-12,6;UBERON:0000483,1.05e-11,306;UBERON:0000119,1.49e-11,309;UBERON:0002240,1.49e-11,3;UBERON:0005174,1.49e-11,3;UBERON:0001137,1.49e-11,3;UBERON:0002038,1.60e-09,1;UBERON:0009661,1.60e-09,1;UBERON:0002950,1.60e-09,1;UBERON:0001891,1.60e-09,1;UBERON:0009616,1.60e-09,1;UBERON:0010286,1.60e-09,1;UBERON:0002336,2.04e-09,1;UBERON:0011215,2.04e-09,1;UBERON:0001018,2.04e-09,1;UBERON:0002473,2.04e-09,1;UBERON:0005340,2.04e-09,1;UBERON:0003544,2.04e-09,1;UBERON:0005970,2.04e-09,1;UBERON:0002316,2.04e-09,1;UBERON:0001020,2.04e-09,1;UBERON:0002437,2.04e-09,1;UBERON:0000941,2.22e-09,1;UBERON:0001785,2.22e-09,1;UBERON:0002464,2.22e-09,1;UBERON:0004904,2.22e-09,1;UBERON:0001021,2.22e-09,1;UBERON:0003902,2.22e-09,1;UBERON:0005425,2.22e-09,1;UBERON:0007190,1.16e-08,1;UBERON:0002420,2.38e-08,9;UBERON:0007245,2.38e-08,9;UBERON:0010009,2.38e-08,9;UBERON:0010011,2.38e-08,9;UBERON:0000454,2.38e-08,9;UBERON:0002680,2.44e-08,9;UBERON:0001895,2.44e-08,9;UBERON:0010092,2.44e-08,9;UBERON:0001872,7.18e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72909630335755,0,1.87411556580271,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.04305109167363,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19781025814636,4.36367585750877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,2.1282458220105,2.86704597845036,6.10109783452688,2.6080489235381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,1.41696576325585,3.51194489925733,1.64093091392604,0,0.691572524642179,0.645902582527404,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0.781078098613847,1.44680757550829,1.52197944465376,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,2.7867590520501,0.920818829879887,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72986087518396,4.1586496045792,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,10.6071291532074,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,8.48150566067541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72909630335755,0,1.87411556580271,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,2.04305109167363,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19781025814636,4.36367585750877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,2.1282458220105,2.86704597845036,6.10109783452688,2.6080489235381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,1.41696576325585,3.51194489925733,1.64093091392604,0,0.691572524642179,0.645902582527404,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0.781078098613847,1.44680757550829,1.52197944465376,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,2.7867590520501,0.920818829879887,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72986087518396,4.1586496045792,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,10.6071291532074,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,8.48150566067541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p8@APBA2 | |short_description=p8@APBA2 | ||
}} | }} |
Latest revision as of 02:28, 17 September 2015
Short description: | p8@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APBA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -234bp_to_AB209281_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | Q59G28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data