FFCP PHASE1:Hg19::chr1:153518332..153518343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_uc009wog.1_5end | |association_with_transcript=102bp_to_uc009wog.1_5end | ||
|cluster_id=chr1:153518332..153518343,+ | |||
|description=CAGE_peak_2_at_uc009wog.1_5end | |description=CAGE_peak_2_at_uc009wog.1_5end | ||
|id=chr1:153518332..153518343,+ | |id=chr1:153518332..153518343,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.87e-19!23;CL:0000057!6.68e-16!75;CL:0002320!4.02e-14!365;CL:0000860!1.04e-13!45;CL:0000134!4.32e-13!358;CL:0002057!5.04e-13!42;CL:0000839!1.35e-12!70;CL:0000766!2.15e-12!76;CL:0000557!3.04e-12!71;CL:0002194!1.00e-11!63;CL:0000576!1.00e-11!63;CL:0000040!1.00e-11!63;CL:0000559!1.00e-11!63;CL:0002009!5.06e-11!65;CL:0000219!4.15e-10!390;CL:0000048!1.65e-08!430;CL:0000723!6.00e-08!436;CL:0000034!3.07e-07!444;CL:0002551!9.99e-07!6 | |ontology_enrichment_celltype=CL:0002620!1.87e-19!23;CL:0000057!6.68e-16!75;CL:0002320!4.02e-14!365;CL:0000860!1.04e-13!45;CL:0000134!4.32e-13!358;CL:0002057!5.04e-13!42;CL:0000839!1.35e-12!70;CL:0000766!2.15e-12!76;CL:0000557!3.04e-12!71;CL:0002194!1.00e-11!63;CL:0000576!1.00e-11!63;CL:0000040!1.00e-11!63;CL:0000559!1.00e-11!63;CL:0002009!5.06e-11!65;CL:0000219!4.15e-10!390;CL:0000048!1.65e-08!430;CL:0000723!6.00e-08!436;CL:0000034!3.07e-07!444;CL:0002551!9.99e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.98e-22;23!CL:0002537;1.68e-11;5!CL:0002552;2.15e-11;5!CL:0002561;1.53e-08;2!CL:0000057;3.76e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.52e-22,23;CL:0000057,2.94e-18,76;CL:0002537,2.68e-11,5;CL:0002552,3.15e-11,5;CL:0002320,2.52e-09,361;CL:0000134,4.77e-09,354;CL:0002561,1.65e-08,2;CL:0000219,2.23e-07,386;CL:0000048,7.18e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.17e-11;5!DOID:450;3.17e-11;5!DOID:66;3.17e-11;5!DOID:423;3.17e-11;5!DOID:0080000;3.17e-11;5!DOID:11722;3.17e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.75e-11,5;DOID:450,2.75e-11,5;DOID:66,2.75e-11,5;DOID:423,2.75e-11,5;DOID:0080000,2.75e-11,5;DOID:11722,2.75e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.41e-14!95;UBERON:0004765!1.08e-13!101;UBERON:0001434!1.08e-13!101;UBERON:0002384!1.38e-13!375;UBERON:0002199!3.19e-13!45;UBERON:0002416!3.19e-13!45;UBERON:0002371!8.46e-12!80;UBERON:0002097!3.37e-11!40;UBERON:0001474!7.30e-11!86;UBERON:0002204!1.10e-08!167;UBERON:0002390!1.43e-08!102;UBERON:0003061!1.43e-08!102;UBERON:0002193!3.91e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;3.20e-13;46!UBERON:0002416;3.20e-13;46!UBERON:0002097;1.97e-12;41!UBERON:0003102;2.84e-11;50!UBERON:0005933;1.53e-08;2!UBERON:0005942;1.53e-08;2!UBERON:0005932;1.53e-08;2!UBERON:0000305;3.23e-08;7!UBERON:0001828;4.00e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.17e-18,99;UBERON:0002097,4.87e-18,41;UBERON:0002199,7.52e-18,46;UBERON:0002416,7.52e-18,46;UBERON:0002384,8.53e-09,371;UBERON:0005933,1.65e-08,2;UBERON:0005942,1.65e-08,2;UBERON:0005932,1.65e-08,2;UBERON:0000305,4.47e-08,7;UBERON:0004871,4.57e-07,8;UBERON:0001828,5.04e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,2.08948502559871,0,0,0,0,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,1.16318591023652,0.755751887377619,2.42584061187816,0.232429036905685,0.411167888021826,0,0.863077176966451,0.768482119587302,0.47296445977717,0,0,1.35426486594342,1.12945403725563,0,1.34834090667051,0.918251677112708,0.320929027076094,1.27867425159808,0.989553900560148,3.19141852194611,3.83602275479425,0,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,11.5499228427219,1.1409436430889,7.92078006924546,0.352303495931295,0.647491777472526,0.421352420106746,4.69554593886255,1.10550885580591,5.57959218349133,0,1.23633464639278,0,0,1.5150250255866,1.37630371859161,5.26421819419948,0,0.30648779579902,0.150238058906597,0,0.358779271377724,2.34913127700424,1.69545520927649,1.20036438433761,4.01904864029912,0.257640540045629,1.48893485065272,1.0126579934476,0.68205903612839,0.757301322732344,2.66944706062668,9.05217918185347,1.42003837006646,0.201504196455281,0.67824236924195,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,4.17931135228781,7.21879481669586,0.118306800039844,0.337169380156203,0.723033089650446,0.110293972732394,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,3.11980435583874,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,1.65862492432618,0.432359860250884,0.37872730027914,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0.24538298343828,1.00034104211935,0,0.623912584592421,1.42743191037729,0.788512075169673,1.17141414992713,0,0,1.03473071292505,0,0.184369168541703,6.51627108510621,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0.511707249066704,0,0,0.308419387605311,0.532685175939381,0.574890092096664,0.519254429183621,0.581051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.633322905892992,1.31717957183961,0.379473173765715,1.39973888097993,0,0,0,0,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,2.88743956579008,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,3.10367830158997,2.07875276582847,3.99308912729002,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,1.35393286007176,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.17472666824203,0,0,0.438535902517113,0.574808199372465,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.34329322598187,0.934853239388898,0.554805861502613,0.378806010550178,0.251567901752575,2.66943366478961,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,1.47284760201473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.102662806856247,4.6392577253528,7.77137588894623,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,0.924351257262837,7.35465155610441,0,0,0,0,0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| ||
|short_description=p2@uc009wog.1 | |short_description=p2@uc009wog.1 | ||
}} | }} |
Latest revision as of 21:43, 27 July 2015
Short description: | p2@uc009wog.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc009wog.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_uc009wog.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.52e-22 | 23 |
fibroblast | 2.94e-18 | 76 |
amnion mesenchymal stem cell | 2.68e-11 | 5 |
fibroblast of gingiva | 3.15e-11 | 5 |
connective tissue cell | 2.52e-09 | 361 |
mesenchymal cell | 4.77e-09 | 354 |
outer root sheath cell | 1.65e-08 | 2 |
motile cell | 2.23e-07 | 386 |
multi fate stem cell | 7.18e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.17e-18 | 99 |
skin of body | 4.87e-18 | 41 |
integument | 7.52e-18 | 46 |
integumental system | 7.52e-18 | 46 |
connective tissue | 8.53e-09 | 371 |
hair root sheath | 1.65e-08 | 2 |
hair outer root sheath | 1.65e-08 | 2 |
bulb of hair follicle | 1.65e-08 | 2 |
amnion | 4.47e-08 | 7 |
somatic layer of lateral plate mesoderm | 4.57e-07 | 8 |
gingiva | 5.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.75e-11 | 5 |
myotonic disease | 2.75e-11 | 5 |
muscle tissue disease | 2.75e-11 | 5 |
myopathy | 2.75e-11 | 5 |
muscular disease | 2.75e-11 | 5 |
myotonic dystrophy | 2.75e-11 | 5 |