FFCP PHASE1:Hg19::chr14:95080849..95080854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=7bp_to_J05176_5end | |association_with_transcript=7bp_to_J05176_5end | ||
|cluster_id=chr14:95080849..95080854,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_19_at_SERPINA3_5end | |description=CAGE_peak_19_at_SERPINA3_5end | ||
|id=chr14:95080849..95080854,+ | |id=chr14:95080849..95080854,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.98e-08!12;CL:0000417!5.98e-08!12;CL:0000668!5.98e-08!12;CL:0000414!5.98e-08!12;CL:0000412!5.98e-08!12;CL:0000182!5.98e-08!12 | |ontology_enrichment_celltype=CL:0000181!5.98e-08!12;CL:0000417!5.98e-08!12;CL:0000668!5.98e-08!12;CL:0000414!5.98e-08!12;CL:0000412!5.98e-08!12;CL:0000182!5.98e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.09e-16;12!CL:0000746;5.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.09e-16,12;CL:0000746,5.93e-08,3;CL:0000513,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.72e-21;1!UBERON:0004161;3.43e-08;11!CL:0000513;5.93e-08;3!UBERON:0003056;7.76e-08;3!UBERON:0009497;4.59e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.79e-25!115;UBERON:0001049!6.62e-14!57;UBERON:0005068!6.62e-14!57;UBERON:0006241!6.62e-14!57;UBERON:0007135!6.62e-14!57;UBERON:0009497!2.38e-13!25;UBERON:0000015!2.38e-13!25;UBERON:0002423!2.38e-13!25;UBERON:0006235!2.38e-13!25;UBERON:0004161!2.38e-13!25;UBERON:0002616!3.16e-13!59;UBERON:0000025!1.22e-12!194;UBERON:0002298!1.86e-11!8;UBERON:0005743!2.07e-11!86;UBERON:0000073!3.14e-11!94;UBERON:0001016!3.14e-11!94;UBERON:0001017!7.43e-11!82;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0004111!2.29e-10!241;UBERON:0003075!2.73e-10!86;UBERON:0007284!2.73e-10!86;UBERON:0008835!4.33e-10!22;UBERON:0003894!4.33e-10!22;UBERON:0000477!1.07e-09!286;UBERON:0002346!1.19e-09!90;UBERON:0009854!1.37e-09!23;UBERON:0003080!1.78e-09!42;UBERON:0002107!2.77e-09!19;UBERON:0006925!2.77e-09!19;UBERON:0008836!2.77e-09!19;UBERON:0007499!1.03e-08!25;UBERON:0009856!2.52e-08!26;UBERON:0005162!2.61e-08!2;UBERON:0000122!2.61e-08!2;UBERON:0005057!2.83e-08!26;UBERON:0002148!3.14e-08!2;UBERON:0009662!3.14e-08!2;UBERON:0002780!4.99e-08!41;UBERON:0001890!4.99e-08!41;UBERON:0006240!4.99e-08!41;UBERON:0000481!9.75e-08!347;UBERON:0000483!1.28e-07!309;UBERON:0000475!1.50e-07!365;UBERON:0000119!1.81e-07!312;UBERON:0001871!2.37e-07!7;UBERON:0005172!2.83e-07!55;UBERON:0005173!2.83e-07!55;UBERON:0003056!6.30e-07!61;UBERON:0004732!6.39e-07!13;UBERON:0002365!7.80e-07!31;UBERON:0002330!7.80e-07!31;UBERON:0000949!9.14e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.04e-26;19!UBERON:0006925;2.04e-26;19!UBERON:0000941;7.72e-21;1!UBERON:0001785;7.72e-21;1!UBERON:0002464;7.72e-21;1!UBERON:0004904;7.72e-21;1!UBERON:0001021;7.72e-21;1!UBERON:0002423;3.84e-20;25!UBERON:0002365;3.00e-16;31!UBERON:0002330;3.00e-16;31!UBERON:0002368;4.47e-14;33!UBERON:0000949;2.04e-13;43!UBERON:0003714;4.09e-11;2!UBERON:0005162;4.09e-11;2!UBERON:0000122;4.09e-11;2!UBERON:0005172;1.81e-07;52!UBERON:0005173;1.81e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.98e-26,19;UBERON:0006925,1.98e-26,19;UBERON:0008836,1.98e-26,19;UBERON:0008835,7.29e-23,22;UBERON:0003894,7.29e-23,22;UBERON:0009854,7.01e-22,23;UBERON:0000941,9.43e-21,1;UBERON:0001785,9.43e-21,1;UBERON:0002464,9.43e-21,1;UBERON:0004904,9.43e-21,1;UBERON:0001021,9.43e-21,1;UBERON:0003902,9.43e-21,1;UBERON:0005425,9.43e-21,1;UBERON:0007499,3.77e-20,25;UBERON:0009497,3.77e-20,25;UBERON:0000015,3.77e-20,25;UBERON:0002423,3.77e-20,25;UBERON:0006235,3.77e-20,25;UBERON:0004161,3.77e-20,25;UBERON:0009856,2.20e-19,26;UBERON:0002365,2.72e-16,31;UBERON:0002330,2.72e-16,31;UBERON:0000949,6.58e-16,45;UBERON:0002368,1.89e-14,35;UBERON:0003714,4.52e-11,2;UBERON:0005162,4.52e-11,2;UBERON:0000122,4.52e-11,2;UBERON:0003929,2.08e-09,54;UBERON:0005172,2.08e-09,54;UBERON:0005173,2.08e-09,54;UBERON:0002530,1.29e-08,59;UBERON:0002417,1.78e-08,60;UBERON:0000916,1.78e-08,60;UBERON:0005177,5.02e-07,101 | |||
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| ||
|short_description=p19@SERPINA3 | |short_description=p19@SERPINA3 | ||
}} | }} |
Latest revision as of 18:43, 16 September 2015
Short description: | p19@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 7bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.09e-16 | 12 |
cardiac muscle cell | 5.93e-08 | 3 |
cardiac muscle myoblast | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-26 | 19 |
digestive gland | 1.98e-26 | 19 |
liver bud | 1.98e-26 | 19 |
hepatic diverticulum | 7.29e-23 | 22 |
liver primordium | 7.29e-23 | 22 |
digestive tract diverticulum | 7.01e-22 | 23 |
cranial nerve II | 9.43e-21 | 1 |
cranial nerve | 9.43e-21 | 1 |
nerve trunk | 9.43e-21 | 1 |
nerve connecting eye with brain | 9.43e-21 | 1 |
nerve | 9.43e-21 | 1 |
retinal neural layer | 9.43e-21 | 1 |
presumptive neural retina | 9.43e-21 | 1 |
epithelial sac | 3.77e-20 | 25 |
epithelium of foregut-midgut junction | 3.77e-20 | 25 |
anatomical boundary | 3.77e-20 | 25 |
hepatobiliary system | 3.77e-20 | 25 |
foregut-midgut junction | 3.77e-20 | 25 |
septum transversum | 3.77e-20 | 25 |
sac | 2.20e-19 | 26 |
exocrine gland | 2.72e-16 | 31 |
exocrine system | 2.72e-16 | 31 |
endocrine system | 6.58e-16 | 45 |
endocrine gland | 1.89e-14 | 35 |
neural tissue | 4.52e-11 | 2 |
multi cell component structure | 4.52e-11 | 2 |
neuron projection bundle | 4.52e-11 | 2 |
gut epithelium | 2.08e-09 | 54 |
abdomen element | 2.08e-09 | 54 |
abdominal segment element | 2.08e-09 | 54 |
gland | 1.29e-08 | 59 |
abdominal segment of trunk | 1.78e-08 | 60 |
abdomen | 1.78e-08 | 60 |
trunk region element | 5.02e-07 | 101 |