FFCP PHASE1:Hg19::chr11:3028225..3028254,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:3028225..3028254,-
|short_description=p5@CARS
|description=CAGE_peak_5_at_CARS_5end
|association_with_transcript=0bp_to_ENST00000484484_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=833 | |EntrezGene=833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |HGNC=1493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484484_5end | |||
|cluster_id=chr11:3028225..3028254,- | |||
|description=CAGE_peak_5_at_CARS_5end | |||
|id=chr11:3028225..3028254,- | |||
|ontology_enrichment_celltype=CL:0000625!2.82e-14!11;CL:0000791!1.71e-11!18;CL:0000789!1.71e-11!18;CL:0002420!1.71e-11!18;CL:0002419!1.71e-11!18;CL:0000790!1.71e-11!18;CL:0000084!4.70e-09!25;CL:0000827!4.70e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.93e-34;11!CL:0000791;1.30e-20;18!CL:0000789;1.30e-20;18!CL:0002419;1.30e-20;18!CL:0000084;2.82e-18;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.69e-34,11;CL:0000791,1.20e-20,18;CL:0000789,1.20e-20,18;CL:0002420,1.20e-20,18;CL:0002419,1.20e-20,18;CL:0000790,1.20e-20,18;CL:0000084,3.08e-18,25;CL:0000827,3.08e-18,25;CL:0000838,5.12e-08,52;CL:0000542,7.72e-08,53;CL:0000051,7.72e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.30e-20;18!UBERON:0010122;6.45e-14;2!UBERON:0006222;1.61e-07;1!UBERON:0005754;1.61e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.41e-40!115;UBERON:0001049!2.72e-17!57;UBERON:0005068!2.72e-17!57;UBERON:0006241!2.72e-17!57;UBERON:0007135!2.72e-17!57;UBERON:0009663!4.59e-14!7;UBERON:0002346!6.70e-14!90;UBERON:0003075!9.30e-14!86;UBERON:0007284!9.30e-14!86;UBERON:0002308!2.00e-13!9;UBERON:0000125!2.00e-13!9;UBERON:0000073!1.99e-12!94;UBERON:0001016!1.99e-12!94;UBERON:0002616!2.08e-12!59;UBERON:0005743!2.24e-12!86;UBERON:0001017!2.45e-12!82;UBERON:0002780!2.79e-12!41;UBERON:0001890!2.79e-12!41;UBERON:0006240!2.79e-12!41;UBERON:0001893!3.62e-12!34;UBERON:0003080!7.21e-12!42;UBERON:0002791!2.89e-11!33;UBERON:0002020!1.02e-10!34;UBERON:0003528!1.02e-10!34;UBERON:0002420!1.28e-10!9;UBERON:0007245!1.28e-10!9;UBERON:0010009!1.28e-10!9;UBERON:0010011!1.28e-10!9;UBERON:0000454!1.28e-10!9;UBERON:0000955!2.47e-10!69;UBERON:0006238!2.47e-10!69;UBERON:0001869!5.49e-10!32;UBERON:0003056!2.04e-09!61;UBERON:0000369!6.01e-09!4;UBERON:0002435!6.01e-09!4;UBERON:0000204!6.01e-09!4;UBERON:0010082!6.01e-09!4;UBERON:0000153!8.57e-09!129;UBERON:0007811!8.57e-09!129;UBERON:0002298!3.06e-08!8;UBERON:0005383!3.81e-07!3;UBERON:0005382!3.81e-07!3;UBERON:0001896!3.96e-07!3;UBERON:0005290!3.96e-07!3;UBERON:0010096!3.96e-07!3;UBERON:0006947!5.87e-07!3;UBERON:0004054!5.87e-07!3;UBERON:0003076!7.54e-07!15;UBERON:0003057!7.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.12e-21;7!UBERON:0002420;7.90e-17;9!UBERON:0000125;7.90e-17;9!UBERON:0007245;7.90e-17;9!UBERON:0002308;7.90e-17;9!UBERON:0010009;7.90e-17;9!UBERON:0010011;7.90e-17;9!UBERON:0000454;7.90e-17;9!UBERON:0000369;1.07e-14;4!UBERON:0002435;1.07e-14;4!UBERON:0000204;1.07e-14;4!UBERON:0001873;6.45e-14;2!UBERON:0000341;2.64e-13;2!UBERON:0005383;1.44e-09;3!UBERON:0005382;1.44e-09;3!UBERON:0001896;3.11e-09;3!UBERON:0005290;3.11e-09;3!UBERON:0006947;5.29e-09;3!UBERON:0004054;5.29e-09;3!UBERON:0000073;1.25e-07;53!UBERON:0002616;1.25e-07;53!UBERON:0000998;1.61e-07;1!UBERON:0002171;1.61e-07;1!UBERON:0006868;1.61e-07;1!UBERON:0006518;1.61e-07;1!UBERON:0008949;1.61e-07;1!UBERON:0000101;1.61e-07;1!UBERON:0002167;1.61e-07;1!UBERON:0002780;2.41e-07;41!UBERON:0001890;2.41e-07;41!UBERON:0001882;3.20e-07;1!UBERON:0002038;3.20e-07;1!UBERON:0001000;3.20e-07;1!UBERON:0009661;3.20e-07;1!UBERON:0002950;3.20e-07;1!UBERON:0005352;3.20e-07;1!UBERON:0005403;3.20e-07;1!UBERON:0001891;3.20e-07;1!UBERON:0005904;5.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.36e-21,7;UBERON:0002420,9.20e-17,9;UBERON:0000125,9.20e-17,9;UBERON:0007245,9.20e-17,9;UBERON:0002308,9.20e-17,9;UBERON:0010009,9.20e-17,9;UBERON:0010011,9.20e-17,9;UBERON:0000454,9.20e-17,9;UBERON:0000369,1.05e-14,4;UBERON:0002435,1.05e-14,4;UBERON:0000204,1.05e-14,4;UBERON:0010082,1.05e-14,4;UBERON:0001873,7.10e-14,2;UBERON:0010122,7.10e-14,2;UBERON:0000341,1.82e-13,2;UBERON:0007023,2.21e-10,114;UBERON:0005383,1.54e-09,3;UBERON:0005382,1.54e-09,3;UBERON:0000073,1.63e-09,53;UBERON:0002616,1.63e-09,53;UBERON:0001896,2.64e-09,3;UBERON:0005290,2.64e-09,3;UBERON:0010096,2.64e-09,3;UBERON:0006947,6.22e-09,3;UBERON:0004054,6.22e-09,3;UBERON:0001049,6.36e-09,56;UBERON:0005068,6.36e-09,56;UBERON:0006241,6.36e-09,56;UBERON:0007135,6.36e-09,56;UBERON:0002780,4.53e-08,41;UBERON:0001890,4.53e-08,41;UBERON:0003080,4.53e-08,41;UBERON:0006240,4.53e-08,41;UBERON:0002171,1.33e-07,1;UBERON:0006518,1.33e-07,1;UBERON:0008949,1.33e-07,1;UBERON:0000101,1.33e-07,1;UBERON:0002167,1.33e-07,1;UBERON:0000998,1.83e-07,1;UBERON:0006868,1.83e-07,1;UBERON:0001882,2.83e-07,1;UBERON:0005403,2.83e-07,1;UBERON:0001016,3.29e-07,89;UBERON:0001000,3.62e-07,1;UBERON:0005352,3.62e-07,1;UBERON:0002038,4.09e-07,1;UBERON:0009661,4.09e-07,1;UBERON:0002950,4.09e-07,1;UBERON:0001891,4.09e-07,1;UBERON:0009616,4.09e-07,1;UBERON:0010286,4.09e-07,1;UBERON:0000955,5.95e-07,68;UBERON:0006238,5.95e-07,68;UBERON:0005904,6.65e-07,4;UBERON:0001017,8.23e-07,81 | |||
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| ||
|short_description=p5@CARS | |||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p5@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000484484_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.69e-34 | 11 |
mature alpha-beta T cell | 1.20e-20 | 18 |
alpha-beta T cell | 1.20e-20 | 18 |
immature T cell | 1.20e-20 | 18 |
mature T cell | 1.20e-20 | 18 |
immature alpha-beta T cell | 1.20e-20 | 18 |
T cell | 3.08e-18 | 25 |
pro-T cell | 3.08e-18 | 25 |
lymphoid lineage restricted progenitor cell | 5.12e-08 | 52 |
lymphocyte | 7.72e-08 | 53 |
common lymphoid progenitor | 7.72e-08 | 53 |