FFCP PHASE1:Hg19::chr1:150482004..150482012,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:150482004..150482012,+ | |||
|coexpression_cluster_id=C766 | |||
|description=CAGE_peak_at_chr1:150482004..150482012,+ | |description=CAGE_peak_at_chr1:150482004..150482012,+ | ||
|id=chr1:150482004..150482012,+ | |id=chr1:150482004..150482012,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.12e-15!75;CL:0000055!4.70e-12!180;CL:0002334!1.41e-08!12 | |ontology_enrichment_celltype=CL:0000057!2.12e-15!75;CL:0000055!4.70e-12!180;CL:0002334!1.41e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002567;4.05e-27;3!CL:0000346;2.56e-26;3!CL:1000428;2.56e-26;3!CL:0002559;4.70e-16;5!CL:0002581;6.05e-10;1!CL:0000148;1.57e-08;10!CL:0002552;5.78e-08;5!CL:0002334;5.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.50e-27,3;CL:0000346,1.03e-26,3;CL:1000428,1.03e-26,3;CL:0002559,2.73e-16,5;CL:0002581,5.30e-10,1;CL:0000333,2.73e-09,41;CL:0000148,1.37e-08,10;CL:0000541,1.37e-08,10;CL:0002552,5.89e-08,5;CL:0002334,5.49e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.72e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.74e-10!95;UBERON:0002199!1.06e-08!45;UBERON:0002416!1.06e-08!45;UBERON:0002097!1.93e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.56e-26;3!UBERON:0001992;2.56e-26;3!UBERON:0002073;4.70e-16;5!UBERON:0001301;6.05e-10;1!UBERON:0007195;6.05e-10;1!UBERON:0001003;2.21e-09;15!UBERON:0007376;2.21e-09;15!UBERON:0002067;3.65e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.03e-26,3;UBERON:0001992,1.03e-26,3;UBERON:0002073,2.73e-16,5;UBERON:0005086,2.73e-16,5;UBERON:0001301,3.40e-10,1;UBERON:0007195,1.07e-09,1;UBERON:0001003,1.81e-09,15;UBERON:0007376,1.81e-09,15;UBERON:0007383,1.81e-09,15;UBERON:0002067,2.71e-09,9;UBERON:0004016,2.71e-09,9;UBERON:0010083,2.71e-09,9;UBERON:0004923,2.08e-07,66 | |||
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| ||
|short_description=p@chr1:150482004..150482012,+ | |short_description=p@chr1:150482004..150482012,+ | ||
}} | }} |
Latest revision as of 21:09, 27 July 2015
Short description: | p@chr1:150482004..150482012, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:150482004..150482012, + |
Coexpression cluster: | C766_Smooth_esophagus_throat_epididymis_Fibroblast_tonsil_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.50e-27 | 3 |
hair follicle dermal papilla cell | 1.03e-26 | 3 |
stem cell of epidermis | 1.03e-26 | 3 |
hair follicle cell | 2.73e-16 | 5 |
perirenal preadipocyte | 5.30e-10 | 1 |
migratory neural crest cell | 2.73e-09 | 41 |
melanocyte | 1.37e-08 | 10 |
melanoblast | 1.37e-08 | 10 |
fibroblast of gingiva | 5.89e-08 | 5 |
preadipocyte | 5.49e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.03e-26 | 3 |
papillary layer of dermis | 1.03e-26 | 3 |
hair follicle | 2.73e-16 | 5 |
hair follicle placode | 2.73e-16 | 5 |
epididymis | 3.40e-10 | 1 |
stroma of bone marrow | 1.07e-09 | 1 |
skin epidermis | 1.81e-09 | 15 |
outer epithelium | 1.81e-09 | 15 |
enveloping layer of ectoderm | 1.81e-09 | 15 |
dermis | 2.71e-09 | 9 |
dermatome | 2.71e-09 | 9 |
future dermis | 2.71e-09 | 9 |
organ component layer | 2.08e-07 | 66 |