FFCP PHASE1:Hg19::chr1:12123343..12123367,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=943 | |EntrezGene=943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |HGNC=11923 | ||
|TSSclassifier=strong | |||
|UniProt=P28908 | |UniProt=P28908 | ||
|association_with_transcript=-66bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | |association_with_transcript=-66bp_to_ENST00000263932,NM_001243,uc001atq.2,uc010obc.1_5end | ||
|cluster_id=chr1:12123343..12123367,+ | |||
|coexpression_cluster_id=C920 | |||
|description=CAGE_peak_1_at_TNFRSF8_5end | |description=CAGE_peak_1_at_TNFRSF8_5end | ||
|id=chr1:12123343..12123367,+ | |id=chr1:12123343..12123367,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.83e-12!52;CL:0000542!1.36e-11!53;CL:0000051!1.36e-11!53;CL:0000988!5.00e-10!182;CL:0000945!8.94e-10!24;CL:0000826!8.94e-10!24;CL:0002032!9.62e-10!165;CL:0000837!9.62e-10!165;CL:0000037!2.66e-09!172;CL:0000566!2.66e-09!172;CL:0002322!1.18e-08!5;CL:0000453!1.66e-08!5;CL:0002274!3.73e-07!5;CL:0000457!3.73e-07!5;CL:0002191!3.73e-07!5;CL:0000097!3.73e-07!5;CL:0000831!3.73e-07!5;CL:0002028!3.73e-07!5 | |ontology_enrichment_celltype=CL:0000838!5.83e-12!52;CL:0000542!1.36e-11!53;CL:0000051!1.36e-11!53;CL:0000988!5.00e-10!182;CL:0000945!8.94e-10!24;CL:0000826!8.94e-10!24;CL:0002032!9.62e-10!165;CL:0000837!9.62e-10!165;CL:0000037!2.66e-09!172;CL:0000566!2.66e-09!172;CL:0002322!1.18e-08!5;CL:0000453!1.66e-08!5;CL:0002274!3.73e-07!5;CL:0000457!3.73e-07!5;CL:0002191!3.73e-07!5;CL:0000097!3.73e-07!5;CL:0000831!3.73e-07!5;CL:0002028!3.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.86e-15;5!CL:0000453;1.18e-14;5!CL:0000945;1.36e-12;24!CL:0000990;5.61e-08;8!CL:0000542;1.26e-07;53!CL:0001014;2.74e-07;2!CL:0001016;2.74e-07;2!CL:0000039;2.77e-07;7!CL:0000586;2.77e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.01e-18,177;CL:0002032,2.62e-17,161;CL:0000837,2.62e-17,161;CL:0000037,3.53e-16,168;CL:0002322,5.53e-15,5;CL:0000453,1.05e-14,5;CL:0000838,3.33e-14,52;CL:0000542,7.56e-14,53;CL:0000051,7.56e-14,53;CL:0000945,1.30e-12,24;CL:0000826,1.30e-12,24;CL:0000990,5.28e-08,8;CL:0000738,7.29e-08,136;CL:0001014,2.62e-07,2;CL:0001016,2.62e-07,2;CL:0000039,2.84e-07,7;CL:0000586,2.84e-07,7;CL:0002031,3.99e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.26e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!4.33e-17!51;DOID:0060083!4.33e-17!51;DOID:1036!4.13e-12!8;DOID:1240!2.71e-11!39;DOID:8692!7.91e-08!31;DOID:0060058!1.53e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.17e-18;51!DOID:0060083;3.17e-18;51!DOID:1036;6.64e-17;8!DOID:1240;2.73e-15;39!DOID:8692;3.12e-12;31!DOID:0060058;1.03e-10;10!DOID:74;7.80e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.58e-29,51;DOID:0060083,3.58e-29,51;DOID:1240,1.40e-19,39;DOID:1036,7.33e-17,8;DOID:8692,1.64e-12,31;DOID:0060058,9.49e-11,10;DOID:0050686,1.33e-07,137;DOID:74,8.16e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1567923693342,36.4526617157759,30.9333370562759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0,0,0,0.393010762749165,0.205601498999509,2.00623794468814,0,0,0,5.79334375802903,0.883817722424512,0.886135578334485,1.89562704635511,7.30120522436348,10.5348071523501,1.15106533222573,0.829050053357545,0.289803085735052,0,0,0,1.69964014046349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,11.9534232007003,8.61443494089654,8.8307396580834,6.94529068602982,11.6067591402789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.792435906119034,3.31724984865235,0.432359860250884,2.39860623510122,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,13.8700857274075,0.997896857164083,4.21311814291207,9.73698480529861,0,1.68478306868075,0,5.48379635205581,7.51903431270201,25.0551831146373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,77.8989256099574,0,0,0,0,0,0,0,47.1339080288532,0,0,0.828851746593443,0,0,23.1399434266811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,0,10.2193298195736,6.75015102498606,1.16348177330109,8.34703944283569,6.27400109816767,6.20939871810618,0.948768663620925,4.76809736941136,0,0,0,0,0,0,0,28.4660283533397,45.3479655933665,44.6925943883349,0,0,0,0.547364367646998,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,3.57686301065381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.0516961473043,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,23.7085329784197,0,0,10.6097077986913,7.15205070305616,9.55512777467126,27.2218408777316,10.8332273638113,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,5.08973628645902,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0.155262956876259,0,0,0,0.601030435988874,0,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,4.22356101632682,0,0,2.43087964941906,0,8.76871389777248,2.65729680626726,4.57983103916364,0,0,0,16.3989664601043,2.24052632357696,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49837315502381,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,8.873017041795,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24830801388074,2.72682895229305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,25.8847593845566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22813760193065,0.253397002022874,21.2136765863322,18.4380009633237,13.600445131157,9.0254714145255,0,0,0,0,0.213233981900981,0,0.452122368852043,0.31037357147929,0,0,0,0,0,1.0776328482334,0.143444410785353,0,0,0.747091421144008,0,0,0,0,0,0,0,35.2625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1567923693342,36.4526617157759,30.9333370562759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0,0,0,0.393010762749165,0.205601498999509,2.00623794468814,0,0,0,5.79334375802903,0.883817722424512,0.886135578334485,1.89562704635511,7.30120522436348,10.5348071523501,1.15106533222573,0.829050053357545,0.289803085735052,0,0,0,1.69964014046349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,11.9534232007003,8.61443494089654,8.8307396580834,6.94529068602982,11.6067591402789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.792435906119034,3.31724984865235,0.432359860250884,2.39860623510122,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,13.8700857274075,0.997896857164083,4.21311814291207,9.73698480529861,0,1.68478306868075,0,5.48379635205581,7.51903431270201,25.0551831146373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,77.8989256099574,0,0,0,0,0,0,0,47.1339080288532,0,0,0.828851746593443,0,0,23.1399434266811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.183195186803725,0,10.2193298195736,6.75015102498606,1.16348177330109,8.34703944283569,6.27400109816767,6.20939871810618,0.948768663620925,4.76809736941136,0,0,0,0,0,0,0,28.4660283533397,45.3479655933665,44.6925943883349,0,0,0,0.547364367646998,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,3.57686301065381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.0516961473043,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,23.7085329784197,0,0,10.6097077986913,7.15205070305616,9.55512777467126,27.2218408777316,10.8332273638113,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,5.08973628645902,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0.155262956876259,0,0,0,0.601030435988874,0,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,4.22356101632682,0,0,2.43087964941906,0,8.76871389777248,2.65729680626726,4.57983103916364,0,0,0,16.3989664601043,2.24052632357696,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49837315502381,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,8.873017041795,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24830801388074,2.72682895229305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,25.8847593845566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22813760193065,0.253397002022874,21.2136765863322,18.4380009633237,13.600445131157,9.0254714145255,0,0,0,0,0.213233981900981,0,0.452122368852043,0.31037357147929,0,0,0,0,0,1.0776328482334,0.143444410785353,0,0,0.747091421144008,0,0,0,0,0,0,0,35.2625341533556 | ||
|short_description=p1@TNFRSF8 | |short_description=p1@TNFRSF8 | ||
}} | }} |
Latest revision as of 12:59, 16 September 2015
Short description: | p1@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF8_5end |
Coexpression cluster: | C920_anaplastic_adult_hereditary_cord_hairy_immature_xeroderma |
Association with transcript: | -66bp_to_ENST00000263932, NM_001243, uc001atq.2, uc010obc.1_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | P28908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.01e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.62e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.62e-17 | 161 |
hematopoietic stem cell | 3.53e-16 | 168 |
embryonic stem cell | 5.53e-15 | 5 |
Langerhans cell | 1.05e-14 | 5 |
lymphoid lineage restricted progenitor cell | 3.33e-14 | 52 |
lymphocyte | 7.56e-14 | 53 |
common lymphoid progenitor | 7.56e-14 | 53 |
lymphocyte of B lineage | 1.30e-12 | 24 |
pro-B cell | 1.30e-12 | 24 |
conventional dendritic cell | 5.28e-08 | 8 |
leukocyte | 7.29e-08 | 136 |
CD1a-positive Langerhans cell | 2.62e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.62e-07 | 2 |
germ line cell | 2.84e-07 | 7 |
germ cell | 2.84e-07 | 7 |
hematopoietic lineage restricted progenitor cell | 3.99e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.58e-29 | 51 |
immune system cancer | 3.58e-29 | 51 |
leukemia | 1.40e-19 | 39 |
chronic leukemia | 7.33e-17 | 8 |
myeloid leukemia | 1.64e-12 | 31 |
lymphoma | 9.49e-11 | 10 |
organ system cancer | 1.33e-07 | 137 |
hematopoietic system disease | 8.16e-07 | 2 |