FFCP PHASE1:Hg19::chr1:113368292..113368325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:113368292..113368325,- | |||
|coexpression_cluster_id=C3849 | |||
|description=CAGE_peak_at_chr1:113368292..113368325,- | |description=CAGE_peak_at_chr1:113368292..113368325,- | ||
|id=chr1:113368292..113368325,- | |id=chr1:113368292..113368325,- | ||
|ontology_enrichment_celltype=CL:0000039!8.47e-67!7;CL:0000586!8.47e-67!7;CL:0002322!9.36e-48!5;CL:0000540!9.37e-15!6;CL:0000031!9.37e-15!6;CL:0000404!9.37e-15!6;CL:0000047!3.29e-11!8;CL:0000148!2.96e-09!10;CL:0000541!2.96e-09!10;CL:0000147!9.60e-07!14 | |ontology_enrichment_celltype=CL:0000039!8.47e-67!7;CL:0000586!8.47e-67!7;CL:0002322!9.36e-48!5;CL:0000540!9.37e-15!6;CL:0000031!9.37e-15!6;CL:0000404!9.37e-15!6;CL:0000047!3.29e-11!8;CL:0000148!2.96e-09!10;CL:0000541!2.96e-09!10;CL:0000147!9.60e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.53e-86;7!CL:0000586;1.53e-86;7!CL:0002322;1.10e-61;5!CL:0002321;1.16e-20;15!CL:0000148;7.54e-12;10!CL:0000147;1.28e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.63e-86,7;CL:0000586,1.63e-86,7;CL:0002322,1.10e-61,5;CL:0000148,7.82e-12,10;CL:0000541,7.82e-12,10;CL:0000147,1.31e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.18e-20;10!UBERON:0005564;4.18e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!4.82e-27!22;DOID:2994!4.82e-27!22;DOID:1799!4.58e-11!1;DOID:10165!4.58e-11!1;DOID:1798!4.58e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.23e-35;22!DOID:2994;2.23e-35;22!DOID:1799;6.65e-14;1!DOID:10165;6.65e-14;1!DOID:1798;6.65e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.23e-35,22;DOID:2994,2.23e-35,22;DOID:1799,6.65e-14,1;DOID:10165,6.65e-14,1;DOID:1798,6.65e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.03e-19!8;UBERON:0003135!3.40e-14!11;UBERON:0000991!1.61e-07!21;UBERON:0009196!1.61e-07!21;UBERON:0009117!1.61e-07!21;UBERON:0005564!1.61e-07!21;UBERON:0004176!3.49e-07!22;UBERON:0003101!3.49e-07!22;UBERON:0000079!3.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.92e-25;8!UBERON:0003135;2.61e-18;11!UBERON:0000922;2.35e-12;49!UBERON:0000991;1.01e-09;21!UBERON:0003101;2.73e-09;22!UBERON:0000079;2.73e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.92e-25,8;UBERON:0003135,2.61e-18,11;UBERON:0000991,1.01e-09,21;UBERON:0009196,1.01e-09,21;UBERON:0009117,1.01e-09,21;UBERON:0005564,1.01e-09,21;UBERON:0004176,2.73e-09,22;UBERON:0003101,2.73e-09,22;UBERON:0000079,2.73e-09,22 | |||
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|short_description=p@chr1:113368292..113368325,- | |short_description=p@chr1:113368292..113368325,- | ||
}} | }} |
Latest revision as of 19:50, 27 July 2015
Short description: | p@chr1:113368292..113368325, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:113368292..113368325, - |
Coexpression cluster: | C3849_choriocarcinoma_testicular_H9_iPS_pancreatic_mucinous_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.63e-86 | 7 |
germ cell | 1.63e-86 | 7 |
embryonic stem cell | 1.10e-61 | 5 |
melanocyte | 7.82e-12 | 10 |
melanoblast | 7.82e-12 | 10 |
pigment cell | 1.31e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.92e-25 | 8 |
male reproductive organ | 2.61e-18 | 11 |
gonad | 1.01e-09 | 21 |
indifferent external genitalia | 1.01e-09 | 21 |
indifferent gonad | 1.01e-09 | 21 |
gonad primordium | 1.01e-09 | 21 |
external genitalia | 2.73e-09 | 22 |
male organism | 2.73e-09 | 22 |
male reproductive system | 2.73e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.23e-35 | 22 |
germ cell cancer | 2.23e-35 | 22 |
islet cell tumor | 6.65e-14 | 1 |
endocrine pancreas cancer | 6.65e-14 | 1 |
pancreatic endocrine carcinoma | 6.65e-14 | 1 |