FFCP PHASE1:Hg19::chr11:2159622..2159637,+: Difference between revisions
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|id=chr11:2159622..2159637,+
|short_description=p8@BC017277
|description=CAGE_peak_8_at_BC017277_5end
|association_with_transcript=-377bp_to_BC017277_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-377bp_to_BC017277_5end | |||
|cluster_id=chr11:2159622..2159637,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_8_at_BC017277_5end | |||
|id=chr11:2159622..2159637,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.40e-21;19!CL:0002575;6.19e-10;2!CL:0002536;9.95e-10;2!CL:0002537;1.73e-08;5!CL:0002541;5.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.26e-21,19;CL:0002575,6.19e-10,2;CL:0002536,9.96e-10,2;CL:0002537,1.71e-08,5;CL:0002541,5.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.46e-09;11!UBERON:0009497;7.51e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.52e-15!14;UBERON:0000158!1.52e-15!14;UBERON:0003124!2.22e-11!7;UBERON:0000478!9.45e-11!24;UBERON:0001987!3.83e-07!4;UBERON:0004340!3.83e-07!4;UBERON:0004119!8.16e-07!169;UBERON:0000925!8.16e-07!169;UBERON:0006595!8.16e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.57e-23;24!UBERON:0005631;7.93e-21;10!UBERON:0000158;7.93e-21;10!UBERON:0000305;1.58e-15;7!UBERON:0001987;4.49e-10;4!UBERON:0000922;8.15e-08;49!UBERON:0002107;2.88e-07;19!UBERON:0006925;2.88e-07;19!UBERON:0003124;5.60e-07;3!UBERON:0000920;5.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.88e-29,14;UBERON:0000158,2.88e-29,14;UBERON:0000478,1.49e-23,24;UBERON:0000305,1.56e-15,7;UBERON:0003124,2.16e-15,7;UBERON:0004871,1.49e-13,8;UBERON:0001987,4.16e-10,4;UBERON:0004340,4.16e-10,4;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19;UBERON:0000920,5.60e-07,3 | |||
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| ||
|short_description=p8@BC017277 | |||
}} | }} |
Latest revision as of 21:02, 23 July 2015
Short description: | p8@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -377bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.26e-21 | 19 |
central nervous system pericyte | 6.19e-10 | 2 |
amniotic epithelial cell | 9.96e-10 | 2 |
amnion mesenchymal stem cell | 1.71e-08 | 5 |
chorionic membrane mesenchymal stem cell | 5.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.88e-29 | 14 |
membranous layer | 2.88e-29 | 14 |
extraembryonic structure | 1.49e-23 | 24 |
amnion | 1.56e-15 | 7 |
chorion | 2.16e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-13 | 8 |
placenta | 4.16e-10 | 4 |
allantois | 4.16e-10 | 4 |
liver | 2.59e-07 | 19 |
digestive gland | 2.59e-07 | 19 |
liver bud | 2.59e-07 | 19 |
egg chorion | 5.60e-07 | 3 |