FFCP PHASE1:Hg19::chr11:2156671..2156708,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2156671..2156708,-
|short_description=p40@IGF2
|description=CAGE_peak_40_at_IGF2_5end
|association_with_transcript=44bp_to_AB528666,BT007013,CU674260,DQ89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=44bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | |||
|cluster_id=chr11:2156671..2156708,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_40_at_IGF2_5end | |||
|id=chr11:2156671..2156708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.55e-20;19!CL:0000244;4.68e-09;4!CL:0000731;4.68e-09;4!CL:0000182;5.20e-09;12!CL:0002541;1.48e-08;3!CL:0002577;4.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.78e-20,19;CL:0000244,3.00e-09,4;CL:0000731,3.00e-09,4;CL:0000182,5.62e-09,12;CL:0002541,1.31e-08,3;CL:0002577,3.25e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.59e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.04e-13!14;UBERON:0000158!5.04e-13!14;UBERON:0000478!1.50e-09!24;UBERON:0004119!7.86e-09!169;UBERON:0000925!7.86e-09!169;UBERON:0006595!7.86e-09!169;UBERON:0000481!8.90e-09!347;UBERON:0003124!9.32e-09!7;UBERON:0000468!1.16e-07!659;UBERON:0005256!2.56e-07!143;UBERON:0004923!3.81e-07!57;UBERON:0003104!9.73e-07!238;UBERON:0009142!9.73e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-20;24!UBERON:0005631;5.70e-16;10!UBERON:0000158;5.70e-16;10!UBERON:0001987;2.31e-10;4!UBERON:0000305;1.62e-09;7!UBERON:0002107;8.98e-09;19!UBERON:0006925;8.98e-09;19!UBERON:0000922;1.28e-08;49!UBERON:0003124;1.48e-08;3!UBERON:0000920;1.48e-08;3!UBERON:0000365;3.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-24,14;UBERON:0000158,1.43e-24,14;UBERON:0000478,8.81e-21,24;UBERON:0003124,2.35e-17,7;UBERON:0001987,1.91e-10,4;UBERON:0004340,1.91e-10,4;UBERON:0000305,1.59e-09,7;UBERON:0004119,3.30e-09,160;UBERON:0000925,3.30e-09,160;UBERON:0006595,3.30e-09,160;UBERON:0002107,9.28e-09,19;UBERON:0006925,9.28e-09,19;UBERON:0008836,9.28e-09,19;UBERON:0000920,1.31e-08,3;UBERON:0004871,2.90e-08,8;UBERON:0000365,2.13e-07,5;UBERON:0008835,2.55e-07,22;UBERON:0003894,2.55e-07,22;UBERON:0009854,6.33e-07,23 | |||
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| ||
|short_description=p40@IGF2 | |||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p40@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 44bp_to_AB528666, BT007013, CU674260, DQ892721, DQ895970_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.78e-20 | 19 |
transitional epithelial cell | 3.00e-09 | 4 |
urothelial cell | 3.00e-09 | 4 |
hepatocyte | 5.62e-09 | 12 |
chorionic membrane mesenchymal stem cell | 1.31e-08 | 3 |
placental epithelial cell | 3.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-24 | 14 |
membranous layer | 1.43e-24 | 14 |
extraembryonic structure | 8.81e-21 | 24 |
chorion | 2.35e-17 | 7 |
placenta | 1.91e-10 | 4 |
allantois | 1.91e-10 | 4 |
amnion | 1.59e-09 | 7 |
endoderm-derived structure | 3.30e-09 | 160 |
endoderm | 3.30e-09 | 160 |
presumptive endoderm | 3.30e-09 | 160 |
liver | 9.28e-09 | 19 |
digestive gland | 9.28e-09 | 19 |
liver bud | 9.28e-09 | 19 |
egg chorion | 1.31e-08 | 3 |
somatic layer of lateral plate mesoderm | 2.90e-08 | 8 |
urothelium | 2.13e-07 | 5 |
hepatic diverticulum | 2.55e-07 | 22 |
liver primordium | 2.55e-07 | 22 |
digestive tract diverticulum | 6.33e-07 | 23 |